| Chain sequence(s) |
H: QVTLRESGPALVKPTQTLTLTCTFSGFSLSTAGMSVGWIRQPPGKALEWLADIWWDDKKHYNPSLKDRLTISKDTSKNQVVLKVTNMDPADTATYYCARDMIFNFYFDVWGQGTTVTVSS
L: DIQMTQSPSTLSASVGDRVTITCSASSRVGYMHWYQQKPGKAPKLLIYDTSKLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCFQGSGYPFTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.2078 | |
| 2 | V | H | -0.5255 | |
| 3 | T | H | -0.6478 | |
| 4 | L | H | 0.0000 | |
| 5 | R | H | -1.3700 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6980 | |
| 8 | G | H | -0.4272 | |
| 9 | P | H | -0.0980 | |
| 11 | A | H | 0.2232 | |
| 12 | L | H | 0.4215 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.7525 | |
| 15 | P | H | -1.7375 | |
| 16 | T | H | -1.8183 | |
| 17 | Q | H | -1.9659 | |
| 18 | T | H | -1.5199 | |
| 19 | L | H | 0.0000 | |
| 20 | T | H | -0.6075 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.4108 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.9364 | |
| 25 | F | H | 0.0000 | |
| 26 | S | H | -0.7837 | |
| 27 | G | H | -0.8297 | |
| 28 | F | H | -0.3004 | |
| 29 | S | H | -0.3992 | |
| 30 | L | H | 0.0000 | |
| 31 | S | H | -0.7375 | |
| 34 | T | H | -0.2137 | |
| 35 | A | H | -0.0687 | |
| 36 | G | H | 0.0000 | |
| 37 | M | H | 0.5156 | |
| 38 | S | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8628 | |
| 45 | P | H | -0.9474 | |
| 46 | P | H | -1.0519 | |
| 47 | G | H | -1.4570 | |
| 48 | K | H | -2.1741 | |
| 49 | A | H | -1.2381 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7149 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | D | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | 0.0000 | |
| 58 | W | H | -1.1887 | |
| 59 | D | H | -2.5376 | |
| 63 | D | H | -2.6566 | |
| 64 | K | H | -2.0822 | |
| 65 | K | H | -1.5284 | |
| 66 | H | H | -0.8766 | |
| 67 | Y | H | -0.8449 | |
| 68 | N | H | -1.0829 | |
| 69 | P | H | -1.4761 | |
| 70 | S | H | -1.1151 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -2.8094 | |
| 74 | D | H | -2.8467 | |
| 75 | R | H | -2.2745 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -1.0730 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.8604 | |
| 80 | K | H | -1.2224 | |
| 81 | D | H | -1.6197 | |
| 82 | T | H | -1.3342 | |
| 83 | S | H | -1.4917 | |
| 84 | K | H | -2.3599 | |
| 85 | N | H | -1.7757 | |
| 86 | Q | H | -1.4834 | |
| 87 | V | H | 0.0000 | |
| 88 | V | H | -0.1630 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.1784 | |
| 91 | V | H | 0.0000 | |
| 92 | T | H | -1.7669 | |
| 93 | N | H | -2.3296 | |
| 94 | M | H | 0.0000 | |
| 95 | D | H | -2.2158 | |
| 96 | P | H | -1.1405 | |
| 97 | A | H | -0.5906 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3428 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | -0.3359 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | M | H | 1.4826 | |
| 109 | I | H | 2.1677 | |
| 110 | F | H | 2.6166 | |
| 112 | N | H | 0.0000 | |
| 113 | F | H | 1.4029 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.1431 | |
| 117 | V | H | -0.0575 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8617 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.5906 | |
| 123 | T | H | -0.2241 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1740 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7374 | |
| 128 | S | H | -0.5937 | |
| 1 | D | L | -2.0353 | |
| 2 | I | L | -1.5857 | |
| 3 | Q | L | -1.7717 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6872 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4429 | |
| 8 | P | L | -0.4178 | |
| 9 | S | L | -0.6497 | |
| 10 | T | L | -0.7654 | |
| 11 | L | L | -0.6489 | |
| 12 | S | L | -0.9414 | |
| 13 | A | L | -1.1111 | |
| 14 | S | L | -0.9426 | |
| 15 | V | L | -0.2194 | |
| 16 | G | L | -0.9479 | |
| 17 | D | L | -1.8749 | |
| 18 | R | L | -2.3574 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6025 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.3634 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.9282 | |
| 25 | A | L | -1.3163 | |
| 26 | S | L | -1.3928 | |
| 27 | S | L | -1.6580 | |
| 28 | R | L | -2.1310 | |
| 29 | V | L | 0.0000 | |
| 37 | G | L | -0.6446 | |
| 38 | Y | L | 0.2040 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7407 | |
| 44 | Q | L | -1.1262 | |
| 45 | K | L | -1.4193 | |
| 46 | P | L | -1.1137 | |
| 47 | G | L | -1.6483 | |
| 48 | K | L | -2.5531 | |
| 49 | A | L | -1.6215 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3400 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1185 | |
| 56 | D | L | -0.0711 | |
| 57 | T | L | -0.2718 | |
| 65 | S | L | -0.5709 | |
| 66 | K | L | -0.9004 | |
| 67 | L | L | -0.0561 | |
| 68 | A | L | 0.0000 | |
| 69 | S | L | -0.3976 | |
| 70 | G | L | -0.5133 | |
| 71 | V | L | -0.1852 | |
| 72 | P | L | -0.2791 | |
| 74 | S | L | -0.3898 | |
| 75 | R | L | -0.8070 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4837 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.6629 | |
| 80 | G | L | -0.6553 | |
| 83 | S | L | -0.8728 | |
| 84 | G | L | -1.1543 | |
| 85 | T | L | -1.2145 | |
| 86 | E | L | -1.2765 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4371 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6088 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4756 | |
| 93 | S | L | -1.3008 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.0130 | |
| 96 | P | L | -1.1002 | |
| 97 | D | L | -1.5923 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.4547 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.6829 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | F | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | S | L | -0.2003 | |
| 109 | G | L | -0.4065 | |
| 114 | Y | L | 0.0175 | |
| 115 | P | L | -0.4464 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | -0.6475 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1324 | |
| 121 | G | L | -0.8946 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3055 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.2577 | |
| 126 | I | L | -0.9346 | |
| 127 | K | L | -1.6186 |