| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFAIYYLESYPEGEAIVLTVPGSERSYDLTGLKPGTEYWVGIDGVKGGTWSSPLSAIFTTGGGGSGGGGSGGGGSGGGGSLPAPKNLVVSRVTEDSARLSWTAPYAAFDSFAISYRERSREGEVIALTVPGSERSYDLTGLKPGTEYIVGILGVKGGRRSKPLRAQFTTGGGGSGGGGSGGGGSGGGGSLPAPKNLVASRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTTGGHHHHHHC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:15)
[INFO] Main: Simulation completed successfully. (00:03:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4751 | |
| 2 | L | A | 0.1487 | |
| 3 | P | A | -0.3620 | |
| 4 | A | A | -0.4786 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0783 | |
| 7 | N | A | -1.4830 | |
| 8 | L | A | 0.0000 | |
| 9 | V | A | -0.0935 | |
| 10 | V | A | 0.0000 | |
| 11 | S | A | -1.1708 | |
| 12 | R | A | -2.3170 | |
| 13 | V | A | -1.6339 | |
| 14 | T | A | -2.1965 | |
| 15 | E | A | -2.8743 | |
| 16 | D | A | -2.8955 | |
| 17 | S | A | -2.3222 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -2.1352 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.9520 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.3555 | |
| 24 | A | A | -1.3599 | |
| 25 | P | A | -1.3945 | |
| 26 | D | A | -2.2594 | |
| 27 | A | A | -1.4868 | |
| 28 | A | A | -1.2057 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.6003 | |
| 31 | S | A | -1.4042 | |
| 32 | F | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | Y | A | 1.2764 | |
| 36 | Y | A | 0.8384 | |
| 37 | L | A | -0.0217 | |
| 38 | E | A | -0.7815 | |
| 39 | S | A | 0.0000 | |
| 40 | Y | A | 0.0681 | |
| 41 | P | A | -0.7128 | |
| 42 | E | A | -2.0677 | |
| 43 | G | A | -1.5883 | |
| 44 | E | A | -1.8028 | |
| 45 | A | A | -0.2460 | |
| 46 | I | A | 1.4258 | |
| 47 | V | A | 2.1725 | |
| 48 | L | A | 1.4191 | |
| 49 | T | A | 0.4551 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.0756 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5539 | |
| 54 | E | A | -1.5677 | |
| 55 | R | A | -1.1077 | |
| 56 | S | A | -0.9719 | |
| 57 | Y | A | -1.1005 | |
| 58 | D | A | -2.2878 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.5542 | |
| 61 | G | A | -1.5189 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9335 | |
| 64 | P | A | -2.6706 | |
| 65 | G | A | -1.9898 | |
| 66 | T | A | -1.3248 | |
| 67 | E | A | -0.4125 | |
| 68 | Y | A | 0.0000 | |
| 69 | W | A | 0.2064 | |
| 70 | V | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | D | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.8866 | |
| 76 | K | A | -1.7572 | |
| 77 | G | A | -1.4585 | |
| 78 | G | A | -1.2130 | |
| 79 | T | A | -0.6299 | |
| 80 | W | A | -0.1502 | |
| 81 | S | A | 0.0000 | |
| 82 | S | A | -0.0429 | |
| 83 | P | A | -0.1211 | |
| 84 | L | A | -0.2661 | |
| 85 | S | A | -0.0756 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.7971 | |
| 90 | T | A | 0.0000 | |
| 91 | G | A | -2.0561 | |
| 92 | G | A | -2.0042 | |
| 93 | G | A | -1.5951 | |
| 94 | G | A | -1.1439 | |
| 95 | S | A | -0.9438 | |
| 96 | G | A | -1.0077 | |
| 97 | G | A | -1.1638 | |
| 98 | G | A | -1.1392 | |
| 99 | G | A | -1.0961 | |
| 100 | S | A | -0.9932 | |
| 101 | G | A | -1.0873 | |
| 102 | G | A | -1.1818 | |
| 103 | G | A | -1.1693 | |
| 104 | G | A | -1.0900 | |
| 105 | S | A | -1.0260 | |
| 106 | G | A | -1.0773 | |
| 107 | G | A | -1.1291 | |
| 108 | G | A | -1.0602 | |
| 109 | G | A | -0.8611 | |
| 110 | S | A | -1.1433 | |
| 111 | L | A | -1.1715 | |
| 112 | P | A | -0.9907 | |
| 113 | A | A | -1.3314 | |
| 114 | P | A | 0.0000 | |
| 115 | K | A | -1.9481 | |
| 116 | N | A | -1.6136 | |
| 117 | L | A | -0.5964 | |
| 118 | V | A | 0.5496 | |
| 119 | V | A | -0.1674 | |
| 120 | S | A | -1.0060 | |
| 121 | R | A | -2.1418 | |
| 122 | V | A | -1.2935 | |
| 123 | T | A | -1.9870 | |
| 124 | E | A | -3.0535 | |
| 125 | D | A | -3.0277 | |
| 126 | S | A | -2.3788 | |
| 127 | A | A | 0.0000 | |
| 128 | R | A | -2.1873 | |
| 129 | L | A | 0.0000 | |
| 130 | S | A | -0.5888 | |
| 131 | W | A | 0.0000 | |
| 132 | T | A | -0.8412 | |
| 133 | A | A | -0.5395 | |
| 134 | P | A | 0.1909 | |
| 135 | Y | A | 0.8798 | |
| 136 | A | A | -0.0731 | |
| 137 | A | A | -0.1767 | |
| 138 | F | A | 0.0000 | |
| 139 | D | A | -2.3368 | |
| 140 | S | A | 0.0000 | |
| 141 | F | A | 0.0000 | |
| 142 | A | A | 0.0000 | |
| 143 | I | A | 0.0000 | |
| 144 | S | A | -0.0692 | |
| 145 | Y | A | 0.0000 | |
| 146 | R | A | -1.6426 | |
| 147 | E | A | -2.5749 | |
| 148 | R | A | -2.9845 | |
| 149 | S | A | -2.3170 | |
| 150 | R | A | -3.3216 | |
| 151 | E | A | -3.2969 | |
| 152 | G | A | -2.2659 | |
| 153 | E | A | -2.1926 | |
| 154 | V | A | -0.3203 | |
| 155 | I | A | 0.2759 | |
| 156 | A | A | 0.0000 | |
| 157 | L | A | 0.0000 | |
| 158 | T | A | -0.0714 | |
| 159 | V | A | 0.0000 | |
| 160 | P | A | -0.9345 | |
| 161 | G | A | 0.0000 | |
| 162 | S | A | -0.8090 | |
| 163 | E | A | -0.8942 | |
| 164 | R | A | -0.8676 | |
| 165 | S | A | -0.8861 | |
| 166 | Y | A | -1.2570 | |
| 167 | D | A | -2.4274 | |
| 168 | L | A | 0.0000 | |
| 169 | T | A | -1.6204 | |
| 170 | G | A | -1.5845 | |
| 171 | L | A | 0.0000 | |
| 172 | K | A | -3.1237 | |
| 173 | P | A | -2.8858 | |
| 174 | G | A | -2.1291 | |
| 175 | T | A | -2.0740 | |
| 176 | E | A | -2.0420 | |
| 177 | Y | A | 0.0000 | |
| 178 | I | A | -1.2420 | |
| 179 | V | A | 0.0000 | |
| 180 | G | A | -0.9565 | |
| 181 | I | A | 0.0000 | |
| 182 | L | A | 0.0000 | |
| 183 | G | A | 0.0000 | |
| 184 | V | A | 0.0000 | |
| 185 | K | A | -2.3500 | |
| 186 | G | A | -2.0119 | |
| 187 | G | A | -1.7251 | |
| 188 | R | A | -2.3772 | |
| 189 | R | A | -2.5211 | |
| 190 | S | A | 0.0000 | |
| 191 | K | A | -2.3457 | |
| 192 | P | A | -1.6851 | |
| 193 | L | A | -1.5016 | |
| 194 | R | A | -2.1921 | |
| 195 | A | A | -1.0780 | |
| 196 | Q | A | -1.6762 | |
| 197 | F | A | 0.0000 | |
| 198 | T | A | -1.4774 | |
| 199 | T | A | 0.0000 | |
| 200 | G | A | -1.9380 | |
| 201 | G | A | -2.0645 | |
| 202 | G | A | -1.9404 | |
| 203 | G | A | -1.3101 | |
| 204 | S | A | -0.9236 | |
| 205 | G | A | -1.0453 | |
| 206 | G | A | -1.0653 | |
| 207 | G | A | -1.0724 | |
| 208 | G | A | -1.0016 | |
| 209 | S | A | -0.9409 | |
| 210 | G | A | -1.0171 | |
| 211 | G | A | -1.1027 | |
| 212 | G | A | -1.1168 | |
| 213 | G | A | -1.0740 | |
| 214 | S | A | -0.9482 | |
| 215 | G | A | -1.0840 | |
| 216 | G | A | -1.2232 | |
| 217 | G | A | -1.0690 | |
| 218 | G | A | -0.9784 | |
| 219 | S | A | -0.5967 | |
| 220 | L | A | -0.3155 | |
| 221 | P | A | -0.5239 | |
| 222 | A | A | -0.6119 | |
| 223 | P | A | 0.0000 | |
| 224 | K | A | -1.9973 | |
| 225 | N | A | -1.4571 | |
| 226 | L | A | 0.0000 | |
| 227 | V | A | 0.5238 | |
| 228 | A | A | -0.4897 | |
| 229 | S | A | -0.9251 | |
| 230 | R | A | -2.0084 | |
| 231 | V | A | -1.1617 | |
| 232 | T | A | -1.8139 | |
| 233 | E | A | -2.9661 | |
| 234 | D | A | -2.6370 | |
| 235 | S | A | -2.0031 | |
| 236 | A | A | 0.0000 | |
| 237 | R | A | -1.5531 | |
| 238 | L | A | 0.0000 | |
| 239 | S | A | -0.5916 | |
| 240 | W | A | 0.0000 | |
| 241 | T | A | -1.3596 | |
| 242 | A | A | -1.4144 | |
| 243 | P | A | -1.3714 | |
| 244 | D | A | -2.2707 | |
| 245 | A | A | -1.4796 | |
| 246 | A | A | -1.1679 | |
| 247 | F | A | 0.0000 | |
| 248 | D | A | -2.4601 | |
| 249 | S | A | 0.0000 | |
| 250 | F | A | 0.0000 | |
| 251 | N | A | -0.3898 | |
| 252 | I | A | 0.0000 | |
| 253 | A | A | 0.0000 | |
| 254 | Y | A | 0.0000 | |
| 255 | W | A | 0.0000 | |
| 256 | E | A | -0.9135 | |
| 257 | P | A | -0.6082 | |
| 258 | G | A | 0.1379 | |
| 259 | I | A | 1.1969 | |
| 260 | G | A | 0.1282 | |
| 261 | G | A | -0.4967 | |
| 262 | E | A | -1.4014 | |
| 263 | A | A | -0.2760 | |
| 264 | I | A | 1.0046 | |
| 265 | W | A | 0.6669 | |
| 266 | L | A | 0.5140 | |
| 267 | R | A | -0.5147 | |
| 268 | V | A | 0.0000 | |
| 269 | P | A | -1.2099 | |
| 270 | G | A | 0.0000 | |
| 271 | S | A | -1.5479 | |
| 272 | E | A | -1.5964 | |
| 273 | R | A | -1.1584 | |
| 274 | S | A | -0.7087 | |
| 275 | Y | A | -0.9439 | |
| 276 | D | A | -2.0276 | |
| 277 | L | A | 0.0000 | |
| 278 | T | A | -1.3680 | |
| 279 | G | A | -1.4533 | |
| 280 | L | A | 0.0000 | |
| 281 | K | A | -2.9693 | |
| 282 | P | A | -2.7746 | |
| 283 | G | A | -2.1759 | |
| 284 | T | A | 0.0000 | |
| 285 | E | A | -1.7376 | |
| 286 | Y | A | 0.0000 | |
| 287 | K | A | -1.0698 | |
| 288 | V | A | 0.0000 | |
| 289 | W | A | 0.0000 | |
| 290 | I | A | 0.0000 | |
| 291 | H | A | 0.0000 | |
| 292 | G | A | 0.0000 | |
| 293 | V | A | -1.0362 | |
| 294 | K | A | -1.4705 | |
| 295 | G | A | -1.2699 | |
| 296 | G | A | -1.3091 | |
| 297 | A | A | -0.8014 | |
| 298 | S | A | -0.6885 | |
| 299 | S | A | 0.0000 | |
| 300 | P | A | -0.0731 | |
| 301 | P | A | -0.0154 | |
| 302 | L | A | 0.0774 | |
| 303 | I | A | 0.3155 | |
| 304 | A | A | -0.3573 | |
| 305 | R | A | -1.7578 | |
| 306 | F | A | 0.0000 | |
| 307 | T | A | -1.4973 | |
| 308 | T | A | 0.0000 | |
| 309 | G | A | -2.0463 | |
| 310 | G | A | -2.5075 | |
| 311 | H | A | -2.9139 | |
| 312 | H | A | -2.8557 | |
| 313 | H | A | -2.7973 | |
| 314 | H | A | -2.6645 | |
| 315 | H | A | -2.2373 | |
| 316 | H | A | -1.6018 | |
| 317 | C | A | -0.1733 |