| Chain sequence(s) |
A: MPSSVSWGILLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:30)
[INFO] Main: Simulation completed successfully. (00:08:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8352 | |
| 2 | P | A | 0.1764 | |
| 3 | S | A | 0.1523 | |
| 4 | S | A | 0.5374 | |
| 5 | V | A | 1.7638 | |
| 6 | S | A | 1.1045 | |
| 7 | W | A | 1.6300 | |
| 8 | G | A | 1.4611 | |
| 9 | I | A | 3.1753 | |
| 10 | L | A | 3.5566 | |
| 11 | L | A | 3.5403 | |
| 12 | L | A | 2.5889 | |
| 13 | A | A | 1.3117 | |
| 14 | G | A | 0.8139 | |
| 15 | L | A | 1.8399 | |
| 16 | C | A | 2.1430 | |
| 17 | C | A | 2.5577 | |
| 18 | L | A | 2.8737 | |
| 19 | V | A | 2.8732 | |
| 20 | P | A | 1.7599 | |
| 21 | V | A | 2.1971 | |
| 22 | S | A | 1.3416 | |
| 23 | L | A | 1.4566 | |
| 24 | A | A | -0.3564 | |
| 25 | E | A | -2.4111 | |
| 26 | D | A | -3.1402 | |
| 27 | P | A | -2.3794 | |
| 28 | Q | A | -2.3546 | |
| 29 | G | A | -2.2382 | |
| 30 | D | A | -2.3793 | |
| 31 | A | A | -1.3821 | |
| 32 | A | A | -1.3980 | |
| 33 | Q | A | -2.4209 | |
| 34 | K | A | -2.8190 | |
| 35 | T | A | -2.1650 | |
| 36 | D | A | -2.7030 | |
| 37 | T | A | -1.7474 | |
| 38 | S | A | -1.8360 | |
| 39 | H | A | -2.5561 | |
| 40 | H | A | -3.0888 | |
| 41 | D | A | -3.8588 | |
| 42 | Q | A | -3.6651 | |
| 43 | D | A | -3.5691 | |
| 44 | H | A | -2.9070 | |
| 45 | P | A | -1.9759 | |
| 46 | T | A | -1.9519 | |
| 47 | F | A | 0.0000 | |
| 48 | N | A | -2.2727 | |
| 49 | K | A | -2.3787 | |
| 50 | I | A | 0.0000 | |
| 51 | T | A | 0.0000 | |
| 52 | P | A | -1.5248 | |
| 53 | N | A | -1.5506 | |
| 54 | L | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | E | A | -1.7399 | |
| 57 | F | A | 0.0000 | |
| 58 | A | A | 0.0000 | |
| 59 | F | A | -0.7908 | |
| 60 | S | A | -0.6711 | |
| 61 | L | A | 0.0000 | |
| 62 | Y | A | 0.0000 | |
| 63 | R | A | -1.3761 | |
| 64 | Q | A | -1.1948 | |
| 65 | L | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | H | A | -2.1116 | |
| 68 | Q | A | -2.0322 | |
| 69 | S | A | -1.5670 | |
| 70 | N | A | -1.8205 | |
| 71 | S | A | -1.0837 | |
| 72 | T | A | -0.9287 | |
| 73 | N | A | -0.9711 | |
| 74 | I | A | 0.0000 | |
| 75 | F | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | S | A | 0.0000 | |
| 78 | P | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | S | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | A | A | 0.0000 | |
| 83 | T | A | 0.0000 | |
| 84 | A | A | 0.0000 | |
| 85 | F | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | M | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | 0.0000 | |
| 90 | L | A | -0.3560 | |
| 91 | G | A | 0.0000 | |
| 92 | T | A | 0.0000 | |
| 93 | K | A | -1.9533 | |
| 94 | A | A | -1.7340 | |
| 95 | D | A | -2.5354 | |
| 96 | T | A | 0.0000 | |
| 97 | H | A | -2.1090 | |
| 98 | D | A | -2.8952 | |
| 99 | E | A | -2.4741 | |
| 100 | I | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | E | A | -2.7361 | |
| 103 | G | A | -1.7485 | |
| 104 | L | A | 0.0000 | |
| 105 | N | A | -1.9241 | |
| 106 | F | A | 0.0000 | |
| 107 | N | A | -1.9403 | |
| 108 | L | A | -1.2789 | |
| 109 | T | A | -1.0459 | |
| 110 | E | A | -2.1511 | |
| 111 | I | A | 0.0000 | |
| 112 | P | A | -1.0765 | |
| 113 | E | A | -1.5653 | |
| 114 | A | A | -1.0463 | |
| 115 | Q | A | -1.5392 | |
| 116 | I | A | 0.0000 | |
| 117 | H | A | 0.0000 | |
| 118 | E | A | -2.2313 | |
| 119 | G | A | 0.0000 | |
| 120 | F | A | 0.0000 | |
| 121 | Q | A | -1.9743 | |
| 122 | E | A | -1.8786 | |
| 123 | L | A | 0.0000 | |
| 124 | L | A | 0.0000 | |
| 125 | R | A | -2.7192 | |
| 126 | T | A | -1.8326 | |
| 127 | L | A | 0.0000 | |
| 128 | N | A | -2.3468 | |
| 129 | Q | A | -2.6011 | |
| 130 | P | A | -2.2863 | |
| 131 | D | A | -2.6675 | |
| 132 | S | A | -2.3224 | |
| 133 | Q | A | -2.3513 | |
| 134 | L | A | 0.0000 | |
| 135 | Q | A | -1.7956 | |
| 136 | L | A | -0.9691 | |
| 137 | T | A | -0.7810 | |
| 138 | T | A | -0.3068 | |
| 139 | G | A | -0.4126 | |
| 140 | N | A | 0.0000 | |
| 141 | G | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | F | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | S | A | -1.4278 | |
| 146 | E | A | -2.5711 | |
| 147 | G | A | -1.8222 | |
| 148 | L | A | -1.8243 | |
| 149 | K | A | -2.7551 | |
| 150 | L | A | -1.8957 | |
| 151 | V | A | -2.0779 | |
| 152 | D | A | -2.9939 | |
| 153 | K | A | -3.0914 | |
| 154 | F | A | 0.0000 | |
| 155 | L | A | -2.3051 | |
| 156 | E | A | -3.5410 | |
| 157 | D | A | -3.0910 | |
| 158 | V | A | 0.0000 | |
| 159 | K | A | -3.3402 | |
| 160 | K | A | -3.1459 | |
| 161 | L | A | -2.2944 | |
| 162 | Y | A | 0.0000 | |
| 163 | H | A | -2.6480 | |
| 164 | S | A | 0.0000 | |
| 165 | E | A | -2.1466 | |
| 166 | A | A | -0.6322 | |
| 167 | F | A | -0.1747 | |
| 168 | T | A | -0.8854 | |
| 169 | V | A | 0.0000 | |
| 170 | N | A | -2.8599 | |
| 171 | F | A | 0.0000 | |
| 172 | G | A | -2.8933 | |
| 173 | D | A | -3.0102 | |
| 174 | T | A | -3.8173 | |
| 175 | E | A | -4.0289 | |
| 176 | E | A | -3.4231 | |
| 177 | A | A | 0.0000 | |
| 178 | K | A | -3.9162 | |
| 179 | K | A | -4.1495 | |
| 180 | Q | A | -2.7748 | |
| 181 | I | A | 0.0000 | |
| 182 | N | A | 0.0000 | |
| 183 | D | A | -3.3661 | |
| 184 | Y | A | -1.9164 | |
| 185 | V | A | 0.0000 | |
| 186 | E | A | -3.2181 | |
| 187 | K | A | -3.2555 | |
| 188 | G | A | -2.1678 | |
| 189 | T | A | 0.0000 | |
| 190 | Q | A | -2.6225 | |
| 191 | G | A | -2.6180 | |
| 192 | K | A | -2.2597 | |
| 193 | I | A | 0.0000 | |
| 194 | V | A | -0.9026 | |
| 195 | D | A | -2.5342 | |
| 196 | L | A | 0.0000 | |
| 197 | V | A | 0.0000 | |
| 198 | K | A | -3.4721 | |
| 199 | E | A | -3.9629 | |
| 200 | L | A | -3.2754 | |
| 201 | D | A | -3.6666 | |
| 202 | R | A | -3.9749 | |
| 203 | D | A | -3.2150 | |
| 204 | T | A | 0.0000 | |
| 205 | V | A | -1.2146 | |
| 206 | F | A | 0.0000 | |
| 207 | A | A | 0.0000 | |
| 208 | L | A | 0.0000 | |
| 209 | V | A | 0.0000 | |
| 210 | N | A | 0.0000 | |
| 211 | Y | A | 0.0000 | |
| 212 | I | A | 0.0000 | |
| 213 | F | A | 0.0000 | |
| 214 | F | A | 0.0000 | |
| 215 | K | A | -1.3420 | |
| 216 | G | A | -1.6415 | |
| 217 | K | A | -2.3885 | |
| 218 | W | A | 0.0000 | |
| 219 | E | A | -2.1523 | |
| 220 | R | A | -1.8792 | |
| 221 | P | A | -1.5144 | |
| 222 | F | A | 0.0000 | |
| 223 | E | A | -1.6606 | |
| 224 | V | A | -0.5061 | |
| 225 | K | A | -2.0391 | |
| 226 | D | A | -2.3964 | |
| 227 | T | A | -2.2813 | |
| 228 | E | A | -3.5147 | |
| 229 | E | A | -3.7929 | |
| 230 | E | A | -3.1169 | |
| 231 | D | A | -2.5047 | |
| 232 | F | A | 0.0000 | |
| 233 | H | A | -1.5685 | |
| 234 | V | A | -0.9179 | |
| 235 | D | A | -1.3774 | |
| 236 | Q | A | -1.0309 | |
| 237 | V | A | 0.7976 | |
| 238 | T | A | -0.0036 | |
| 239 | T | A | -0.8962 | |
| 240 | V | A | -1.3934 | |
| 241 | K | A | -2.9167 | |
| 242 | V | A | 0.0000 | |
| 243 | P | A | -2.4007 | |
| 244 | M | A | 0.0000 | |
| 245 | M | A | 0.0000 | |
| 246 | K | A | -1.3467 | |
| 247 | R | A | -0.8929 | |
| 248 | L | A | -0.0144 | |
| 249 | G | A | -0.0033 | |
| 250 | M | A | -0.8110 | |
| 251 | F | A | 0.0000 | |
| 252 | N | A | -2.2654 | |
| 253 | I | A | 0.0000 | |
| 254 | Q | A | -1.3209 | |
| 255 | H | A | -1.0313 | |
| 256 | C | A | -1.4426 | |
| 257 | K | A | -2.6672 | |
| 258 | K | A | -2.7060 | |
| 259 | L | A | 0.0000 | |
| 260 | S | A | -2.0734 | |
| 261 | S | A | 0.0000 | |
| 262 | W | A | -0.3776 | |
| 263 | V | A | 0.0000 | |
| 264 | L | A | 0.0000 | |
| 265 | L | A | -0.7304 | |
| 266 | M | A | 0.0000 | |
| 267 | K | A | -2.2928 | |
| 268 | Y | A | 0.0000 | |
| 269 | L | A | -1.3964 | |
| 270 | G | A | -1.9502 | |
| 271 | N | A | -1.8129 | |
| 272 | A | A | 0.0000 | |
| 273 | T | A | 0.0000 | |
| 274 | A | A | 0.0000 | |
| 275 | I | A | 0.0000 | |
| 276 | F | A | 0.0000 | |
| 277 | F | A | 0.0000 | |
| 278 | L | A | -0.5375 | |
| 279 | P | A | -1.4439 | |
| 280 | D | A | -2.3929 | |
| 281 | E | A | -2.8024 | |
| 282 | G | A | -2.1861 | |
| 283 | K | A | -2.2971 | |
| 284 | L | A | -1.7721 | |
| 285 | Q | A | -2.2498 | |
| 286 | H | A | -2.2233 | |
| 287 | L | A | 0.0000 | |
| 288 | E | A | 0.0000 | |
| 289 | N | A | -2.0915 | |
| 290 | E | A | -1.8327 | |
| 291 | L | A | 0.0000 | |
| 292 | T | A | -1.3110 | |
| 293 | H | A | -1.6667 | |
| 294 | D | A | -2.3413 | |
| 295 | I | A | 0.0000 | |
| 296 | I | A | 0.0000 | |
| 297 | T | A | -2.0965 | |
| 298 | K | A | -2.8253 | |
| 299 | F | A | 0.0000 | |
| 300 | L | A | -1.7393 | |
| 301 | E | A | -3.1763 | |
| 302 | N | A | -3.4347 | |
| 303 | E | A | -3.7991 | |
| 304 | D | A | -4.1387 | |
| 305 | R | A | -3.5367 | |
| 306 | R | A | -2.1694 | |
| 307 | S | A | -0.4690 | |
| 308 | A | A | 0.0000 | |
| 309 | S | A | -0.4744 | |
| 310 | L | A | 0.0000 | |
| 311 | H | A | 0.0000 | |
| 312 | L | A | 0.0000 | |
| 313 | P | A | 0.0000 | |
| 314 | K | A | -0.8892 | |
| 315 | L | A | 0.0000 | |
| 316 | S | A | -0.8041 | |
| 317 | I | A | 0.0000 | |
| 318 | T | A | -0.7290 | |
| 319 | G | A | 0.0000 | |
| 320 | T | A | -0.2952 | |
| 321 | Y | A | -0.6033 | |
| 322 | D | A | -1.4576 | |
| 323 | L | A | 0.0000 | |
| 324 | K | A | -1.5624 | |
| 325 | S | A | -1.2010 | |
| 326 | V | A | 0.0000 | |
| 327 | L | A | 0.0000 | |
| 328 | G | A | -1.1610 | |
| 329 | Q | A | -1.4451 | |
| 330 | L | A | -0.9457 | |
| 331 | G | A | -1.1232 | |
| 332 | I | A | 0.0000 | |
| 333 | T | A | -0.8864 | |
| 334 | K | A | -1.5419 | |
| 335 | V | A | 0.0000 | |
| 336 | F | A | -0.8463 | |
| 337 | S | A | -1.2372 | |
| 338 | N | A | -1.8338 | |
| 339 | G | A | -1.6043 | |
| 340 | A | A | -1.6057 | |
| 341 | D | A | -1.8691 | |
| 342 | L | A | 0.0000 | |
| 343 | S | A | -1.4903 | |
| 344 | G | A | -1.1380 | |
| 345 | V | A | 0.0000 | |
| 346 | T | A | 0.0000 | |
| 347 | E | A | -3.0268 | |
| 348 | E | A | -3.0126 | |
| 349 | A | A | -1.7184 | |
| 350 | P | A | -1.4152 | |
| 351 | L | A | 0.0000 | |
| 352 | K | A | -1.1078 | |
| 353 | L | A | 0.0000 | |
| 354 | S | A | -1.0937 | |
| 355 | K | A | -1.0930 | |
| 356 | A | A | 0.0000 | |
| 357 | V | A | 0.0000 | |
| 358 | H | A | 0.0000 | |
| 359 | K | A | -0.3398 | |
| 360 | A | A | 0.0000 | |
| 361 | V | A | -0.4146 | |
| 362 | L | A | 0.0000 | |
| 363 | T | A | -0.3269 | |
| 364 | I | A | 0.0000 | |
| 365 | D | A | -0.8765 | |
| 366 | E | A | 0.0000 | |
| 367 | K | A | -2.4450 | |
| 368 | G | A | 0.0000 | |
| 369 | T | A | -1.8662 | |
| 370 | E | A | -2.1879 | |
| 371 | A | A | -0.8005 | |
| 372 | A | A | -0.5047 | |
| 373 | G | A | -0.2466 | |
| 374 | A | A | 0.3998 | |
| 375 | M | A | 1.5517 | |
| 376 | F | A | 1.4250 | |
| 377 | L | A | 1.6184 | |
| 378 | E | A | -0.0537 | |
| 379 | A | A | 0.9007 | |
| 380 | I | A | 2.2397 | |
| 381 | P | A | 1.6486 | |
| 382 | M | A | 1.8187 | |
| 383 | S | A | 1.4962 | |
| 384 | I | A | 2.0411 | |
| 385 | P | A | 0.6799 | |
| 386 | P | A | -0.6431 | |
| 387 | E | A | -1.6260 | |
| 388 | V | A | 0.0000 | |
| 389 | K | A | -1.0335 | |
| 390 | F | A | 0.0000 | |
| 391 | N | A | -1.3309 | |
| 392 | K | A | -1.7632 | |
| 393 | P | A | -0.6988 | |
| 394 | F | A | 0.0000 | |
| 395 | V | A | 0.0000 | |
| 396 | F | A | 0.0000 | |
| 397 | L | A | 0.0000 | |
| 398 | M | A | 0.0000 | |
| 399 | I | A | 0.0000 | |
| 400 | E | A | 0.0000 | |
| 401 | Q | A | -1.6360 | |
| 402 | N | A | -1.9901 | |
| 403 | T | A | 0.0000 | |
| 404 | K | A | -1.8768 | |
| 405 | S | A | 0.0000 | |
| 406 | P | A | 0.0000 | |
| 407 | L | A | 0.0000 | |
| 408 | F | A | 0.0000 | |
| 409 | M | A | 0.0000 | |
| 410 | G | A | 0.0000 | |
| 411 | K | A | 0.0000 | |
| 412 | V | A | 0.0000 | |
| 413 | V | A | 0.0000 | |
| 414 | N | A | -1.0946 | |
| 415 | P | A | -1.2178 | |
| 416 | T | A | -1.3256 | |
| 417 | Q | A | -2.0768 | |
| 418 | K | A | -2.3119 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine