Chain sequence(s) |
A: DAEFRHDSGYEVHHQK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07) [INFO] Main: Simulation completed successfully. (00:00:07) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | D | A | -1.8245 | |
2 | A | A | -0.6128 | |
3 | E | A | -1.5977 | |
4 | F | A | 0.2254 | |
5 | R | A | -1.8863 | |
6 | H | A | -1.0477 | |
7 | D | A | -1.8981 | |
8 | S | A | -0.6084 | |
9 | G | A | -0.1326 | |
10 | Y | A | 1.0976 | |
11 | E | A | -0.2574 | |
12 | V | A | 1.4330 | |
13 | H | A | -0.6856 | |
14 | H | A | -0.5436 | |
15 | Q | A | -1.5398 | |
16 | K | A | -1.9229 |