| Chain sequence(s) |
H: QVQLQESGGGEVQAGGSLRLSCAASGDISKYRFMGWYRQAPGKEREFVAGISRGSITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAALLIGAGDSDDLLYYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.1983 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.1434 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.1983 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1937 | |
| 8 | G | H | -0.3804 | |
| 9 | G | H | -0.2328 | |
| 11 | G | H | -0.4851 | |
| 12 | E | H | -1.7911 | |
| 13 | V | H | -0.2500 | |
| 14 | Q | H | -1.1534 | |
| 15 | A | H | -0.2691 | |
| 16 | G | H | -0.5023 | |
| 17 | G | H | -0.2365 | |
| 18 | S | H | -0.2381 | |
| 19 | L | H | 0.0308 | |
| 20 | R | H | -1.0008 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.0033 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0290 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.2370 | |
| 27 | G | H | -0.4631 | |
| 28 | D | H | -1.6450 | |
| 29 | I | H | 0.0000 | |
| 30 | S | H | -0.4345 | |
| 35 | K | H | -1.6962 | |
| 36 | Y | H | -0.2929 | |
| 37 | R | H | -1.3604 | |
| 38 | F | H | -0.0401 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.2681 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.4247 | |
| 45 | A | H | -0.0972 | |
| 46 | P | H | -0.3369 | |
| 47 | G | H | -0.7457 | |
| 48 | K | H | -1.7455 | |
| 49 | E | H | -2.2098 | |
| 50 | R | H | -1.2399 | |
| 51 | E | H | -0.3924 | |
| 52 | F | H | 0.7801 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | -0.3332 | |
| 58 | R | H | -1.9325 | |
| 59 | G | H | -0.8339 | |
| 63 | S | H | 0.0640 | |
| 64 | I | H | 1.9690 | |
| 65 | T | H | 0.4853 | |
| 66 | Y | H | 0.8480 | |
| 67 | Y | H | 0.4342 | |
| 68 | A | H | -0.2499 | |
| 69 | D | H | -1.9981 | |
| 70 | S | H | -0.5318 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -1.9666 | |
| 74 | G | H | -0.8322 | |
| 75 | R | H | -0.4306 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.0437 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1170 | |
| 80 | R | H | -0.3080 | |
| 81 | D | H | -0.7419 | |
| 82 | N | H | -1.3487 | |
| 83 | A | H | -0.4660 | |
| 84 | K | H | -1.7432 | |
| 85 | N | H | -0.6044 | |
| 86 | T | H | -0.0581 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | 0.2740 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.4042 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -0.4872 | |
| 93 | S | H | -0.2863 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -1.5807 | |
| 96 | P | H | -0.6937 | |
| 97 | E | H | -1.8363 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.0154 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4034 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.1357 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | L | H | 0.0000 | |
| 108 | L | H | 1.2194 | |
| 109 | I | H | 0.5080 | |
| 110 | G | H | -0.3815 | |
| 111 | A | H | -0.0915 | |
| 111A | G | H | -0.7928 | |
| 112B | D | H | -1.9127 | |
| 112A | S | H | -0.8656 | |
| 112 | D | H | -2.1630 | |
| 113 | D | H | -1.8442 | |
| 114 | L | H | 1.2587 | |
| 115 | L | H | 0.7063 | |
| 116 | Y | H | 1.4051 | |
| 117 | Y | H | 0.6298 | |
| 118 | W | H | 0.5047 | |
| 119 | G | H | -0.2227 | |
| 120 | Q | H | -1.2149 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.1397 | |
| 123 | Q | H | -0.6532 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2235 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.3008 | |
| 128 | S | H | -0.2380 |