| Chain sequence(s) |
L: CMYHGNWPVVAGAPDC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:05)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 205 | C | L | 0.8933 | |
| 206 | M | L | 0.7886 | |
| 207 | Y | L | 1.2137 | |
| 208 | H | L | -0.8401 | |
| 209 | G | L | -0.8811 | |
| 210 | N | L | -1.1441 | |
| 211 | W | L | 0.9089 | |
| 212 | P | L | 0.2967 | |
| 213 | V | L | 1.9333 | |
| 214 | V | L | 1.4689 | |
| 215 | A | L | 0.3066 | |
| 216 | G | L | -0.2442 | |
| 217 | A | L | -0.0354 | |
| 218 | P | L | -0.5673 | |
| 219 | D | L | -1.7025 | |
| 220 | C | L | 0.4929 |