| Chain sequence(s) |
A: LVAYGIAQGTAEKVVSLINAGLTVGSIISILGGVTVGLSGVFTAVKAAIAKQGIKKAIQL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:47)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.0000 | |
| 2 | V | A | 0.0342 | |
| 3 | A | A | 0.4293 | |
| 4 | Y | A | 1.1526 | |
| 5 | G | A | 0.1759 | |
| 6 | I | A | 0.0310 | |
| 7 | A | A | -0.6912 | |
| 8 | Q | A | -1.8780 | |
| 9 | G | A | -1.6278 | |
| 10 | T | A | -1.5439 | |
| 11 | A | A | 0.0000 | |
| 12 | E | A | -3.1475 | |
| 13 | K | A | -2.7638 | |
| 14 | V | A | 0.0000 | |
| 15 | V | A | 0.0000 | |
| 16 | S | A | -1.3222 | |
| 17 | L | A | -0.2751 | |
| 18 | I | A | 0.0000 | |
| 19 | N | A | -1.0778 | |
| 20 | A | A | -0.3657 | |
| 21 | G | A | -0.3815 | |
| 22 | L | A | 0.6017 | |
| 23 | T | A | 0.2524 | |
| 24 | V | A | 0.2887 | |
| 25 | G | A | 0.2584 | |
| 26 | S | A | 0.6596 | |
| 27 | I | A | 0.0000 | |
| 28 | I | A | 1.4911 | |
| 29 | S | A | 1.0632 | |
| 30 | I | A | 2.2154 | |
| 31 | L | A | 2.0013 | |
| 32 | G | A | 0.7624 | |
| 33 | G | A | 1.0443 | |
| 34 | V | A | 2.1242 | |
| 35 | T | A | 1.5904 | |
| 36 | V | A | 2.0914 | |
| 37 | G | A | 0.6515 | |
| 38 | L | A | 0.0000 | |
| 39 | S | A | 0.1836 | |
| 40 | G | A | -0.0762 | |
| 41 | V | A | 0.4085 | |
| 42 | F | A | 0.0000 | |
| 43 | T | A | -0.1462 | |
| 44 | A | A | -0.0174 | |
| 45 | V | A | 0.0000 | |
| 46 | K | A | -0.7460 | |
| 47 | A | A | -0.7001 | |
| 48 | A | A | 0.0000 | |
| 49 | I | A | -1.2037 | |
| 50 | A | A | -0.9968 | |
| 51 | K | A | -2.2768 | |
| 52 | Q | A | -2.3208 | |
| 53 | G | A | -1.5561 | |
| 54 | I | A | -1.4301 | |
| 55 | K | A | -2.4046 | |
| 56 | K | A | -2.2688 | |
| 57 | A | A | 0.0000 | |
| 58 | I | A | -1.5029 | |
| 59 | Q | A | -1.4498 | |
| 60 | L | A | -0.0250 |