Chain sequence(s) |
B: QIQLVESGGGVVQPGGSLRLSCAHSGIRYSYYAIAWYRQAPGKQREFVALITNLDNTYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCNVHGVWGQGTLVTVSS
input PDB |
Selected Chain(s) | B |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40) [INFO] Main: Simulation completed successfully. (00:00:41) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | B | -1.7621 | |
2 | I | B | 0.0000 | |
3 | Q | B | -1.0784 | |
4 | L | B | 0.0000 | |
5 | V | B | 0.8892 | |
6 | E | B | 0.0000 | |
7 | S | B | -0.2339 | |
8 | G | B | -0.7233 | |
9 | G | B | 0.2412 | |
10 | G | B | 0.8047 | |
11 | V | B | 1.6801 | |
12 | V | B | 0.0555 | |
13 | Q | B | -1.3251 | |
14 | P | B | -1.7123 | |
15 | G | B | -1.5718 | |
16 | G | B | -1.0643 | |
17 | S | B | -1.5433 | |
18 | L | B | -1.0840 | |
19 | R | B | -2.3514 | |
20 | L | B | 0.0000 | |
21 | S | B | -0.4627 | |
22 | C | B | 0.0000 | |
23 | A | B | -0.3326 | |
24 | H | B | 0.0000 | |
25 | S | B | -1.2840 | |
26 | G | B | -1.5596 | |
27 | I | B | -1.0904 | |
28 | R | B | -1.4961 | |
29 | Y | B | 0.1402 | |
30 | S | B | 0.3788 | |
31 | Y | B | 1.4964 | |
32 | Y | B | 0.7158 | |
33 | A | B | 0.0990 | |
34 | I | B | 0.0000 | |
35 | A | B | 0.0000 | |
36 | W | B | 0.0000 | |
37 | Y | B | 0.2114 | |
38 | R | B | 0.0000 | |
39 | Q | B | -1.2765 | |
40 | A | B | -1.4683 | |
41 | P | B | -1.2667 | |
42 | G | B | -1.7926 | |
43 | K | B | -2.9806 | |
44 | Q | B | -2.7746 | |
45 | R | B | -2.0724 | |
46 | E | B | -1.5099 | |
47 | F | B | -0.1082 | |
48 | V | B | 0.0000 | |
49 | A | B | 0.0000 | |
50 | L | B | 0.5604 | |
51 | I | B | 0.0000 | |
52 | T | B | 0.0000 | |
53 | N | B | -0.0206 | |
54 | L | B | 0.5040 | |
55 | D | B | -1.4288 | |
56 | N | B | -0.9647 | |
57 | T | B | 0.0281 | |
58 | Y | B | 0.7380 | |
59 | Y | B | 0.0141 | |
60 | A | B | -0.8374 | |
61 | D | B | -2.2199 | |
62 | S | B | -1.6718 | |
63 | V | B | 0.0000 | |
64 | K | B | -2.3975 | |
65 | G | B | -1.8016 | |
66 | R | B | -1.5372 | |
67 | F | B | 0.0000 | |
68 | T | B | -0.8663 | |
69 | I | B | 0.0000 | |
70 | S | B | -0.9737 | |
71 | R | B | -1.5135 | |
72 | D | B | -2.0950 | |
73 | N | B | -2.5809 | |
74 | S | B | -2.0814 | |
75 | K | B | -2.8112 | |
76 | N | B | -2.3756 | |
77 | T | B | 0.0000 | |
78 | V | B | 0.0000 | |
79 | Y | B | -0.7428 | |
80 | L | B | 0.0000 | |
81 | Q | B | -1.7342 | |
82 | M | B | 0.0000 | |
83 | N | B | -2.1536 | |
84 | S | B | -1.5721 | |
85 | L | B | 0.0000 | |
86 | R | B | -2.6442 | |
87 | A | B | -1.8466 | |
88 | E | B | -2.3435 | |
89 | D | B | 0.0000 | |
90 | T | B | -0.3685 | |
91 | A | B | 0.0000 | |
92 | V | B | 0.8296 | |
93 | Y | B | 0.0000 | |
94 | Y | B | 0.3848 | |
95 | C | B | 0.0000 | |
96 | N | B | -0.0150 | |
97 | V | B | 0.0000 | |
98 | H | B | -0.8497 | |
99 | G | B | -0.5529 | |
100 | V | B | -0.0422 | |
101 | W | B | 0.3017 | |
102 | G | B | 0.0108 | |
103 | Q | B | -0.8092 | |
104 | G | B | 0.0000 | |
105 | T | B | 0.6595 | |
106 | L | B | 1.8297 | |
107 | V | B | 0.0000 | |
108 | T | B | 0.4560 | |
109 | V | B | 0.0000 | |
110 | S | B | -0.6641 | |
111 | S | B | -0.6953 |