Project name: RS926-236

Status: done

Started: 2025-07-17 03:05:23
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Chain sequence(s) B: QIQLVESGGGVVQPGGSLRLSCAHSGIRYSYYAIAWYRQAPGKQREFVALITNLDNTYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCNVHGVWGQGTLVTVSS
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-2.9806
Maximal score value
1.8297
Average score
-0.6136
Total score value
-68.1071

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q B -1.7621
2 I B 0.0000
3 Q B -1.0784
4 L B 0.0000
5 V B 0.8892
6 E B 0.0000
7 S B -0.2339
8 G B -0.7233
9 G B 0.2412
10 G B 0.8047
11 V B 1.6801
12 V B 0.0555
13 Q B -1.3251
14 P B -1.7123
15 G B -1.5718
16 G B -1.0643
17 S B -1.5433
18 L B -1.0840
19 R B -2.3514
20 L B 0.0000
21 S B -0.4627
22 C B 0.0000
23 A B -0.3326
24 H B 0.0000
25 S B -1.2840
26 G B -1.5596
27 I B -1.0904
28 R B -1.4961
29 Y B 0.1402
30 S B 0.3788
31 Y B 1.4964
32 Y B 0.7158
33 A B 0.0990
34 I B 0.0000
35 A B 0.0000
36 W B 0.0000
37 Y B 0.2114
38 R B 0.0000
39 Q B -1.2765
40 A B -1.4683
41 P B -1.2667
42 G B -1.7926
43 K B -2.9806
44 Q B -2.7746
45 R B -2.0724
46 E B -1.5099
47 F B -0.1082
48 V B 0.0000
49 A B 0.0000
50 L B 0.5604
51 I B 0.0000
52 T B 0.0000
53 N B -0.0206
54 L B 0.5040
55 D B -1.4288
56 N B -0.9647
57 T B 0.0281
58 Y B 0.7380
59 Y B 0.0141
60 A B -0.8374
61 D B -2.2199
62 S B -1.6718
63 V B 0.0000
64 K B -2.3975
65 G B -1.8016
66 R B -1.5372
67 F B 0.0000
68 T B -0.8663
69 I B 0.0000
70 S B -0.9737
71 R B -1.5135
72 D B -2.0950
73 N B -2.5809
74 S B -2.0814
75 K B -2.8112
76 N B -2.3756
77 T B 0.0000
78 V B 0.0000
79 Y B -0.7428
80 L B 0.0000
81 Q B -1.7342
82 M B 0.0000
83 N B -2.1536
84 S B -1.5721
85 L B 0.0000
86 R B -2.6442
87 A B -1.8466
88 E B -2.3435
89 D B 0.0000
90 T B -0.3685
91 A B 0.0000
92 V B 0.8296
93 Y B 0.0000
94 Y B 0.3848
95 C B 0.0000
96 N B -0.0150
97 V B 0.0000
98 H B -0.8497
99 G B -0.5529
100 V B -0.0422
101 W B 0.3017
102 G B 0.0108
103 Q B -0.8092
104 G B 0.0000
105 T B 0.6595
106 L B 1.8297
107 V B 0.0000
108 T B 0.4560
109 V B 0.0000
110 S B -0.6641
111 S B -0.6953
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Laboratory of Theory of Biopolymers 2018