Project name: 8.35A10

Status: done

Started: 2026-07-07 07:59:11
Settings
Chain sequence(s) H: EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISGGGGITYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTALYYCSRILLLFYAMDYWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQNLNVWLSWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:41)
Show buried residues

Minimal score value
-3.4051
Maximal score value
2.9007
Average score
-0.512
Total score value
-115.7052

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.6723
2 V H -0.4051
3 M H 0.3387
4 L H 0.0000
5 V H 0.6286
6 E H 0.0000
7 S H -0.5509
8 G H -0.8559
9 G H -0.3520
11 G H 0.3831
12 L H 1.0530
13 V H -0.2856
14 K H -1.8214
15 P H -1.7064
16 G H -1.3824
17 G H -0.9707
18 S H -1.0172
19 L H -0.5410
20 K H -1.5017
21 L H 0.0000
22 S H -0.4030
23 C H 0.0000
24 A H -0.0881
25 A H 0.0000
26 S H -0.4603
27 G H -0.7633
28 F H -0.2569
29 T H -0.2521
30 F H 0.0000
35 S H -0.6437
36 S H -0.0931
37 Y H 0.4138
38 T H 0.0000
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 T H -2.1788
46 P H -1.8606
47 E H -3.1972
48 K H -3.3390
49 R H -3.4051
50 L H 0.0000
51 E H -1.3809
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 T H 0.0000
56 I H 0.0000
57 S H 0.4524
58 G H -0.1306
59 G H -0.5681
62 G H -0.2303
63 G H 0.2448
64 I H 1.6910
65 T H 1.0517
66 Y H 0.6529
67 Y H -0.5785
68 P H -1.5038
69 D H -2.4587
70 S H -1.8251
71 V H 0.0000
72 K H -2.4086
74 G H -1.6338
75 R H -1.3145
76 F H 0.0000
77 T H -0.6770
78 I H 0.0000
79 S H -0.2498
80 R H -0.9567
81 D H -1.4367
82 N H -1.6750
83 A H -1.3365
84 K H -2.2347
85 N H -1.6657
86 T H -1.0068
87 L H 0.0000
88 Y H -0.4092
89 L H 0.0000
90 Q H -1.0183
91 M H 0.0000
92 S H -0.8946
93 S H -1.0364
94 L H 0.0000
95 R H -2.1733
96 S H -1.8819
97 E H -2.2861
98 D H 0.0000
99 T H -0.6622
100 A H 0.0000
101 L H -0.0730
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 S H 0.0000
106 R H 0.0000
107 I H 0.0000
108 L H 1.9029
109 L H 2.8442
110 L H 2.9007
112 F H 2.3284
113 Y H 1.7533
114 A H 0.0000
115 M H 0.0000
116 D H 0.0000
117 Y H 0.3506
118 W H 0.0000
119 G H 0.0000
120 Q H -1.0009
121 G H 0.0000
122 T H -0.3411
123 S H -0.1333
124 V H 0.0000
125 T H -0.1448
126 V H 0.0000
127 S H -0.7273
128 S H -0.6838
1 D L -2.1669
2 I L 0.0000
3 Q L -2.1916
4 M L 0.0000
5 N L -1.5851
6 Q L -1.0042
7 S L -0.8698
8 P L -0.6724
9 S L -0.8849
10 S L -0.9799
11 L L -0.6162
12 S L -0.8110
13 A L 0.0000
14 S L -0.6722
15 L L 0.0690
16 G L -0.4990
17 D L -1.0135
18 T L -0.6050
19 I L 0.0000
20 T L -0.2041
21 I L 0.0000
22 T L -0.6156
23 C L 0.0000
24 H L -1.8146
25 A L 0.0000
26 S L -1.8176
27 Q L -2.1870
28 N L -2.0218
29 L L 0.0000
36 N L -1.5051
37 V L -0.5661
38 W L -0.0749
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.2083
45 K L -1.6852
46 P L -1.1680
47 G L -1.2084
48 N L -1.8469
49 I L -1.1559
50 P L 0.0000
51 K L -1.5602
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1545
56 K L -0.9475
57 A L 0.0000
65 S L -0.9045
66 N L -1.1658
67 L L -0.2946
68 H L -0.3664
69 T L -0.3170
70 G L -0.4055
71 V L -0.2609
72 P L -0.2960
74 S L -0.4179
75 R L -0.6713
76 F L 0.0000
77 S L -0.5132
78 G L -0.5812
79 S L -0.7338
80 G L -0.9004
83 S L -1.0513
84 G L -1.3080
85 T L -1.3622
86 G L -1.2583
87 F L 0.0000
88 T L -0.4909
89 L L 0.0000
90 T L -0.2767
91 I L 0.0000
92 S L -0.7718
93 S L -0.6827
94 L L 0.0000
95 Q L -0.8846
96 P L -1.1223
97 E L -1.8360
98 D L 0.0000
99 I L -0.7863
100 A L 0.0000
101 T L -1.1137
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L 0.2911
108 Q L -0.2696
109 S L -0.2564
114 Y L -0.0337
115 P L -0.7155
116 W L 0.0000
117 T L -0.8102
118 F L 0.0000
119 G L 0.0000
120 G L -1.8806
121 G L 0.0000
122 T L 0.0000
123 K L -1.6925
124 L L 0.0000
125 E L -1.2051
126 I L -0.8004
127 K L -1.5629
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Laboratory of Theory of Biopolymers 2018