| Chain sequence(s) |
H: EVMLVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISGGGGITYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTALYYCSRILLLFYAMDYWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQNLNVWLSWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6723 | |
| 2 | V | H | -0.4051 | |
| 3 | M | H | 0.3387 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.6286 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5509 | |
| 8 | G | H | -0.8559 | |
| 9 | G | H | -0.3520 | |
| 11 | G | H | 0.3831 | |
| 12 | L | H | 1.0530 | |
| 13 | V | H | -0.2856 | |
| 14 | K | H | -1.8214 | |
| 15 | P | H | -1.7064 | |
| 16 | G | H | -1.3824 | |
| 17 | G | H | -0.9707 | |
| 18 | S | H | -1.0172 | |
| 19 | L | H | -0.5410 | |
| 20 | K | H | -1.5017 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.4030 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0881 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.4603 | |
| 27 | G | H | -0.7633 | |
| 28 | F | H | -0.2569 | |
| 29 | T | H | -0.2521 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.6437 | |
| 36 | S | H | -0.0931 | |
| 37 | Y | H | 0.4138 | |
| 38 | T | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -2.1788 | |
| 46 | P | H | -1.8606 | |
| 47 | E | H | -3.1972 | |
| 48 | K | H | -3.3390 | |
| 49 | R | H | -3.4051 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.3809 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.4524 | |
| 58 | G | H | -0.1306 | |
| 59 | G | H | -0.5681 | |
| 62 | G | H | -0.2303 | |
| 63 | G | H | 0.2448 | |
| 64 | I | H | 1.6910 | |
| 65 | T | H | 1.0517 | |
| 66 | Y | H | 0.6529 | |
| 67 | Y | H | -0.5785 | |
| 68 | P | H | -1.5038 | |
| 69 | D | H | -2.4587 | |
| 70 | S | H | -1.8251 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4086 | |
| 74 | G | H | -1.6338 | |
| 75 | R | H | -1.3145 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6770 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2498 | |
| 80 | R | H | -0.9567 | |
| 81 | D | H | -1.4367 | |
| 82 | N | H | -1.6750 | |
| 83 | A | H | -1.3365 | |
| 84 | K | H | -2.2347 | |
| 85 | N | H | -1.6657 | |
| 86 | T | H | -1.0068 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4092 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0183 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.8946 | |
| 93 | S | H | -1.0364 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1733 | |
| 96 | S | H | -1.8819 | |
| 97 | E | H | -2.2861 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6622 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | -0.0730 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | S | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | I | H | 0.0000 | |
| 108 | L | H | 1.9029 | |
| 109 | L | H | 2.8442 | |
| 110 | L | H | 2.9007 | |
| 112 | F | H | 2.3284 | |
| 113 | Y | H | 1.7533 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.3506 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0009 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.3411 | |
| 123 | S | H | -0.1333 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1448 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7273 | |
| 128 | S | H | -0.6838 | |
| 1 | D | L | -2.1669 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.1916 | |
| 4 | M | L | 0.0000 | |
| 5 | N | L | -1.5851 | |
| 6 | Q | L | -1.0042 | |
| 7 | S | L | -0.8698 | |
| 8 | P | L | -0.6724 | |
| 9 | S | L | -0.8849 | |
| 10 | S | L | -0.9799 | |
| 11 | L | L | -0.6162 | |
| 12 | S | L | -0.8110 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.6722 | |
| 15 | L | L | 0.0690 | |
| 16 | G | L | -0.4990 | |
| 17 | D | L | -1.0135 | |
| 18 | T | L | -0.6050 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.2041 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6156 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -1.8146 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.8176 | |
| 27 | Q | L | -2.1870 | |
| 28 | N | L | -2.0218 | |
| 29 | L | L | 0.0000 | |
| 36 | N | L | -1.5051 | |
| 37 | V | L | -0.5661 | |
| 38 | W | L | -0.0749 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2083 | |
| 45 | K | L | -1.6852 | |
| 46 | P | L | -1.1680 | |
| 47 | G | L | -1.2084 | |
| 48 | N | L | -1.8469 | |
| 49 | I | L | -1.1559 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.5602 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1545 | |
| 56 | K | L | -0.9475 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.9045 | |
| 66 | N | L | -1.1658 | |
| 67 | L | L | -0.2946 | |
| 68 | H | L | -0.3664 | |
| 69 | T | L | -0.3170 | |
| 70 | G | L | -0.4055 | |
| 71 | V | L | -0.2609 | |
| 72 | P | L | -0.2960 | |
| 74 | S | L | -0.4179 | |
| 75 | R | L | -0.6713 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5132 | |
| 78 | G | L | -0.5812 | |
| 79 | S | L | -0.7338 | |
| 80 | G | L | -0.9004 | |
| 83 | S | L | -1.0513 | |
| 84 | G | L | -1.3080 | |
| 85 | T | L | -1.3622 | |
| 86 | G | L | -1.2583 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4909 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2767 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.7718 | |
| 93 | S | L | -0.6827 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.8846 | |
| 96 | P | L | -1.1223 | |
| 97 | E | L | -1.8360 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.7863 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.1137 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.2911 | |
| 108 | Q | L | -0.2696 | |
| 109 | S | L | -0.2564 | |
| 114 | Y | L | -0.0337 | |
| 115 | P | L | -0.7155 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.8102 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.8806 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.6925 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.2051 | |
| 126 | I | L | -0.8004 | |
| 127 | K | L | -1.5629 |