| Chain sequence(s) |
B: HEREELIARAELMREALEYAIRFLREYADADPSVDAAAVVERAEEALEVVEEALEAARAGDLERARELLEEAEPAVREAAEAAARVRAAAAAFAAAAAAAGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | B | -3.1958 | |
| 2 | E | B | -3.8288 | |
| 3 | R | B | -4.6597 | |
| 4 | E | B | -4.4079 | |
| 5 | E | B | -4.3247 | |
| 6 | L | B | 0.0000 | |
| 7 | I | B | -2.8504 | |
| 8 | A | B | -2.2289 | |
| 9 | R | B | -2.4021 | |
| 10 | A | B | 0.0000 | |
| 11 | E | B | -2.5835 | |
| 12 | L | B | -0.6828 | |
| 13 | M | B | 0.0000 | |
| 14 | R | B | -2.6646 | |
| 15 | E | B | -2.2197 | |
| 16 | A | B | -1.1115 | |
| 17 | L | B | 0.0000 | |
| 18 | E | B | -1.7963 | |
| 19 | Y | B | -0.3240 | |
| 20 | A | B | 0.0000 | |
| 21 | I | B | -1.8324 | |
| 22 | R | B | -2.4172 | |
| 23 | F | B | -1.6714 | |
| 24 | L | B | 0.0000 | |
| 25 | R | B | -3.2034 | |
| 26 | E | B | -2.9833 | |
| 27 | Y | B | -1.7433 | |
| 28 | A | B | -2.0533 | |
| 29 | D | B | -2.3795 | |
| 30 | A | B | -1.2081 | |
| 31 | D | B | -1.6320 | |
| 32 | P | B | -1.2295 | |
| 33 | S | B | -1.1923 | |
| 34 | V | B | -1.4821 | |
| 35 | D | B | -2.0032 | |
| 36 | A | B | 0.0000 | |
| 37 | A | B | -1.3651 | |
| 38 | A | B | -1.4989 | |
| 39 | V | B | 0.0000 | |
| 40 | V | B | 0.0000 | |
| 41 | E | B | -3.1598 | |
| 42 | R | B | -2.9365 | |
| 43 | A | B | 0.0000 | |
| 44 | E | B | -3.8159 | |
| 45 | E | B | -3.8081 | |
| 46 | A | B | 0.0000 | |
| 47 | L | B | -3.2651 | |
| 48 | E | B | -3.5761 | |
| 49 | V | B | -3.2539 | |
| 50 | V | B | 0.0000 | |
| 51 | E | B | -3.5390 | |
| 52 | E | B | -3.6778 | |
| 53 | A | B | 0.0000 | |
| 54 | L | B | 0.0000 | |
| 55 | E | B | -3.6844 | |
| 56 | A | B | -3.5578 | |
| 57 | A | B | 0.0000 | |
| 58 | R | B | -3.3904 | |
| 59 | A | B | -2.0600 | |
| 60 | G | B | -2.5411 | |
| 61 | D | B | -3.4346 | |
| 62 | L | B | -3.6430 | |
| 63 | E | B | -4.0349 | |
| 64 | R | B | -4.3917 | |
| 65 | A | B | 0.0000 | |
| 66 | R | B | -4.8408 | |
| 67 | E | B | -4.7545 | |
| 68 | L | B | 0.0000 | |
| 69 | L | B | 0.0000 | |
| 70 | E | B | -4.2876 | |
| 71 | E | B | -3.7313 | |
| 72 | A | B | 0.0000 | |
| 73 | E | B | -3.0234 | |
| 74 | P | B | -2.3255 | |
| 75 | A | B | -2.7594 | |
| 76 | V | B | 0.0000 | |
| 77 | R | B | -3.0182 | |
| 78 | E | B | -2.5321 | |
| 79 | A | B | 0.0000 | |
| 80 | A | B | -1.8746 | |
| 81 | E | B | -3.2217 | |
| 82 | A | B | 0.0000 | |
| 83 | A | B | 0.0000 | |
| 84 | A | B | -2.2098 | |
| 85 | R | B | -2.9112 | |
| 86 | V | B | 0.0000 | |
| 87 | R | B | -2.2523 | |
| 88 | A | B | -1.1927 | |
| 89 | A | B | -0.6878 | |
| 90 | A | B | -0.2940 | |
| 91 | A | B | 0.0885 | |
| 92 | A | B | 0.8618 | |
| 93 | F | B | 1.9066 | |
| 94 | A | B | 1.1724 | |
| 95 | A | B | 0.8132 | |
| 96 | A | B | 0.8278 | |
| 97 | A | B | 0.5835 | |
| 98 | A | B | 0.2164 | |
| 99 | A | B | 0.1540 | |
| 100 | A | B | -0.1394 | |
| 101 | G | B | -0.3684 | |
| 102 | S | B | -0.3381 | |
| 103 | G | B | -0.3098 | |
| 104 | C | B | 0.3340 |