| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEYLHETEDVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPVGVPLPSAPPPSPLYVPPPASSPEAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKENVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9470 | |
| 2 | L | A | 1.9713 | |
| 3 | P | A | 0.6467 | |
| 4 | P | A | 0.3499 | |
| 5 | T | A | 0.1107 | |
| 6 | T | A | 0.1271 | |
| 7 | P | A | 0.1751 | |
| 8 | V | A | 1.2221 | |
| 9 | A | A | 0.0296 | |
| 10 | K | A | -1.1618 | |
| 11 | V | A | -0.4128 | |
| 12 | Q | A | -1.5183 | |
| 13 | S | A | -1.5931 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4028 | |
| 16 | E | A | -2.4287 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4620 | |
| 20 | P | A | 0.1108 | |
| 21 | T | A | 0.1142 | |
| 22 | S | A | -0.1698 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1028 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2652 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8637 | |
| 31 | R | A | -2.6395 | |
| 32 | L | A | -0.7736 | |
| 33 | L | A | 1.2086 | |
| 34 | T | A | 1.4382 | |
| 35 | V | A | 1.9619 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2372 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6139 | |
| 40 | K | A | -1.6716 | |
| 41 | D | A | -0.7003 | |
| 42 | I | A | 1.2437 | |
| 43 | V | A | 2.1981 | |
| 44 | V | A | 1.6579 | |
| 45 | N | A | -0.5230 | |
| 46 | G | A | -0.3636 | |
| 47 | K | A | -0.1216 | |
| 48 | V | A | 2.0340 | |
| 49 | L | A | 2.5366 | |
| 50 | V | A | 1.4846 | |
| 51 | P | A | 0.3714 | |
| 52 | K | A | -0.6602 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1306 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4878 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3006 | |
| 70 | K | A | -1.8167 | |
| 71 | F | A | -0.6705 | |
| 72 | A | A | -0.5695 | |
| 73 | L | A | -0.8528 | |
| 74 | P | A | -1.2550 | |
| 75 | Q | A | -2.4685 | |
| 76 | K | A | -3.0927 | |
| 77 | D | A | -2.9905 | |
| 78 | F | A | -1.6433 | |
| 79 | Y | A | -1.9189 | |
| 80 | D | A | -2.7593 | |
| 81 | P | A | -2.3519 | |
| 82 | E | A | -3.0676 | |
| 83 | K | A | -3.4339 | |
| 84 | E | A | -2.4924 | |
| 85 | R | A | -1.2874 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6356 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9958 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3283 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7359 | |
| 99 | G | A | -0.5434 | |
| 100 | P | A | -0.4368 | |
| 101 | L | A | -0.0152 | |
| 102 | G | A | -0.2801 | |
| 103 | K | A | -0.7827 | |
| 104 | G | A | -0.6193 | |
| 105 | S | A | -0.6317 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1464 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1956 | |
| 110 | L | A | -0.0585 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1324 | |
| 113 | K | A | -0.4909 | |
| 114 | L | A | -0.9108 | |
| 115 | G | A | -1.0136 | |
| 116 | D | A | -1.6095 | |
| 117 | T | A | -1.3615 | |
| 118 | E | A | -2.5010 | |
| 119 | N | A | -2.6088 | |
| 120 | P | A | -2.0354 | |
| 121 | T | A | -1.5563 | |
| 122 | E | A | -2.0212 | |
| 123 | Y | A | -0.7655 | |
| 124 | L | A | -0.8673 | |
| 125 | H | A | -1.6577 | |
| 126 | E | A | -2.2966 | |
| 127 | T | A | -2.2289 | |
| 128 | E | A | -3.1741 | |
| 129 | D | A | -2.8639 | |
| 130 | V | A | -1.5893 | |
| 131 | R | A | -1.2469 | |
| 132 | V | A | -0.2824 | |
| 133 | N | A | -0.9017 | |
| 134 | F | A | -0.3807 | |
| 135 | S | A | -0.4065 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8118 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2272 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5557 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2362 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1592 | |
| 157 | D | A | 0.4827 | |
| 158 | L | A | 1.0380 | |
| 159 | A | A | 0.8726 | |
| 160 | P | A | 0.0502 | |
| 161 | P | A | 0.4124 | |
| 162 | C | A | 0.5075 | |
| 163 | P | A | 0.0174 | |
| 164 | G | A | -0.0705 | |
| 165 | L | A | 0.6064 | |
| 166 | P | A | -0.0947 | |
| 167 | P | A | -0.3314 | |
| 168 | G | A | -0.4136 | |
| 169 | A | A | 0.3098 | |
| 170 | C | A | 1.0158 | |
| 171 | P | A | 0.7282 | |
| 172 | P | A | 1.0783 | |
| 173 | I | A | 2.2195 | |
| 174 | Q | A | 1.1850 | |
| 175 | L | A | 1.5188 | |
| 176 | V | A | 0.8406 | |
| 177 | N | A | -0.3262 | |
| 178 | S | A | 0.0092 | |
| 179 | V | A | 0.4180 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3792 | |
| 182 | D | A | 0.0764 | |
| 183 | G | A | -0.1583 | |
| 184 | D | A | -0.5560 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1423 | |
| 190 | F | A | 0.0568 | |
| 191 | G | A | -0.1123 | |
| 192 | N | A | -0.2741 | |
| 193 | M | A | -0.1317 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3651 | |
| 197 | E | A | -2.5566 | |
| 198 | L | A | -1.2223 | |
| 199 | Q | A | -2.5251 | |
| 200 | Q | A | -3.3268 | |
| 201 | D | A | -3.5966 | |
| 202 | R | A | -3.3457 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1883 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3774 | |
| 211 | S | A | -1.9054 | |
| 212 | T | A | -1.4567 | |
| 213 | R | A | -2.1022 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1704 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3271 | |
| 220 | L | A | 0.5275 | |
| 221 | K | A | -1.2509 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8697 | |
| 224 | N | A | -1.6362 | |
| 225 | E | A | -1.3050 | |
| 226 | A | A | -0.8123 | |
| 227 | Y | A | -0.4074 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6947 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0873 | |
| 234 | F | A | 0.2691 | |
| 235 | G | A | -0.8480 | |
| 236 | R | A | -2.6812 | |
| 237 | R | A | -3.0405 | |
| 238 | E | A | -2.2147 | |
| 239 | Q | A | -0.1810 | |
| 240 | V | A | 1.5188 | |
| 241 | Y | A | 1.2319 | |
| 242 | A | A | 0.1651 | |
| 243 | R | A | -1.1556 | |
| 244 | H | A | -1.1730 | |
| 245 | F | A | -0.2055 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5596 | |
| 249 | S | A | -1.2122 | |
| 250 | G | A | -1.0809 | |
| 251 | P | A | -0.3444 | |
| 252 | V | A | 0.4565 | |
| 253 | G | A | 0.4397 | |
| 254 | V | A | 1.7005 | |
| 255 | P | A | 0.8484 | |
| 256 | L | A | 1.0678 | |
| 257 | P | A | 0.3392 | |
| 258 | S | A | -0.1113 | |
| 259 | A | A | 0.0705 | |
| 260 | P | A | -0.3226 | |
| 261 | P | A | -0.0013 | |
| 262 | P | A | 0.0923 | |
| 263 | S | A | 0.5976 | |
| 264 | P | A | 0.6933 | |
| 265 | L | A | 1.8919 | |
| 266 | Y | A | 1.7871 | |
| 267 | V | A | 1.9534 | |
| 268 | P | A | 0.9506 | |
| 269 | P | A | 0.3001 | |
| 270 | P | A | -0.3145 | |
| 271 | A | A | -0.1137 | |
| 272 | S | A | -0.2671 | |
| 273 | S | A | -0.2959 | |
| 274 | P | A | -0.1593 | |
| 275 | E | A | -0.1273 | |
| 276 | A | A | 0.4997 | |
| 277 | V | A | 1.4914 | |
| 278 | L | A | 1.1963 | |
| 279 | P | A | 0.1522 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.3799 | |
| 282 | D | A | -0.2256 | |
| 283 | Y | A | 1.0654 | |
| 284 | F | A | 0.8109 | |
| 285 | G | A | 0.1453 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9109 | |
| 291 | L | A | 1.6280 | |
| 292 | V | A | 0.6392 | |
| 293 | S | A | -0.1470 | |
| 294 | S | A | -0.9652 | |
| 295 | D | A | -1.8375 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1783 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6893 | |
| 301 | R | A | -1.9931 | |
| 302 | P | A | -1.0174 | |
| 303 | F | A | -0.1841 | |
| 304 | W | A | -0.5286 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0804 | |
| 307 | R | A | -2.8298 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3779 | |
| 310 | G | A | -1.2221 | |
| 311 | N | A | -1.3077 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9498 | |
| 319 | N | A | -0.9024 | |
| 320 | E | A | -1.0572 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3756 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2068 | |
| 333 | N | A | 0.3986 | |
| 334 | F | A | 1.5045 | |
| 335 | T | A | 0.7644 | |
| 336 | I | A | 0.3941 | |
| 337 | S | A | -1.0920 | |
| 338 | Q | A | -1.9262 | |
| 339 | Q | A | -1.7056 | |
| 340 | L | A | 0.1566 | |
| 341 | S | A | -0.3409 | |
| 342 | T | A | -0.8919 | |
| 343 | P | A | -1.5456 | |
| 344 | K | A | -2.5710 | |
| 345 | E | A | -2.6247 | |
| 346 | N | A | -1.4915 | |
| 347 | V | A | 0.6233 | |
| 348 | Y | A | 0.8729 | |
| 349 | D | A | -0.2919 | |
| 350 | P | A | -0.7428 | |
| 351 | S | A | -0.6281 | |
| 352 | N | A | -1.0386 | |
| 353 | F | A | -1.2147 | |
| 354 | K | A | -2.0604 | |
| 355 | N | A | -1.8250 | |
| 356 | Y | A | -0.1249 | |
| 357 | L | A | 0.5924 | |
| 358 | R | A | 0.9426 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4672 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0089 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9072 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6576 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3103 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3167 | |
| 376 | L | A | -1.7471 | |
| 377 | D | A | -2.0220 | |
| 378 | P | A | -1.0584 | |
| 379 | G | A | -1.0168 | |
| 380 | V | A | -0.9286 | |
| 381 | L | A | -0.5391 | |
| 382 | A | A | -0.6595 | |
| 383 | H | A | -0.8475 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4033 | |
| 386 | T | A | -0.5752 | |
| 387 | M | A | -0.3322 | |
| 388 | N | A | -0.8683 | |
| 389 | P | A | -1.2823 | |
| 390 | T | A | -1.5997 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5846 | |
| 393 | E | A | -2.9917 | |
| 394 | N | A | -2.7707 | |
| 395 | W | A | -1.5680 | |
| 396 | N | A | -1.2319 | |
| 397 | L | A | -0.2441 | |
| 398 | G | A | 0.5141 | |
| 399 | F | A | 2.4165 | |
| 400 | V | A | 1.8536 | |
| 401 | P | A | 0.0631 | |
| 402 | P | A | -1.9786 | |
| 403 | K | A | -3.5281 | |
| 404 | E | A | -4.0634 | |
| 405 | R | A | -4.5656 | |
| 406 | E | A | -4.0707 | |
| 407 | D | A | -2.9979 | |
| 408 | P | A | -1.8366 | |
| 409 | Y | A | -0.9884 | |
| 410 | K | A | -2.1033 | |
| 411 | G | A | -0.6450 | |
| 412 | L | A | 0.6650 | |
| 413 | I | A | 1.5842 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3805 | |
| 416 | E | A | -1.6336 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9175 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0533 | |
| 421 | E | A | -2.7619 | |
| 422 | R | A | -2.5324 | |
| 423 | F | A | -1.2713 | |
| 424 | S | A | -1.4490 | |
| 425 | Q | A | -1.7847 | |
| 426 | D | A | -2.8916 | |
| 427 | L | A | -1.9831 | |
| 428 | D | A | -2.7711 | |
| 429 | Q | A | -2.6055 | |
| 430 | F | A | -1.4163 | |
| 431 | A | A | -0.8773 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5329 | |
| 435 | K | A | -0.6955 | |
| 436 | F | A | 0.1757 | |
| 437 | L | A | 1.0485 | |
| 438 | Y | A | 0.8417 | |
| 439 | Q | A | -0.2577 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine