Project name: query_structure

Status: done

Started: 2026-03-16 23:20:19
Settings
Chain sequence(s) A: GFGCPGNQLKCNNHCKSISCRAGYCDAATLWLRCTCTDCNGKK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:22)
Show buried residues

Minimal score value
-3.0432
Maximal score value
1.7041
Average score
-0.6877
Total score value
-29.5696

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4255
2 F A 0.8097
3 G A -0.1422
4 C A -0.1480
5 P A -0.2102
6 G A -0.8422
7 N A -0.9301
8 Q A -0.5345
9 L A 0.0997
10 K A -1.3242
11 C A 0.0000
12 N A -1.0399
13 N A -1.8554
14 H A -0.8303
15 C A 0.0000
16 K A -2.3893
17 S A -0.8171
18 I A 0.9802
19 S A -0.6660
20 C A -1.8174
21 R A -3.0432
22 A A -1.6711
23 G A -0.5855
24 Y A 0.6531
25 C A 0.0000
26 D A 0.0433
27 A A 0.6845
28 A A 0.4344
29 T A 0.7031
30 L A 1.7041
31 W A 0.9242
32 L A 0.5358
33 R A -0.8823
34 C A -0.1661
35 T A 0.1534
36 C A -0.4373
37 T A -0.8896
38 D A -2.4360
39 C A -2.0035
40 N A -2.8549
41 G A -2.5640
42 K A -2.9968
43 K A -2.7925
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Laboratory of Theory of Biopolymers 2018