Project name: Design11_5_0

Status: done

Started: 2026-07-22 17:47:09
Settings
Chain sequence(s) E: NRDAASRADIAERAAALEAEVAARLEAFRARAPELAAEMEAARRRAEEILAERPDLAEALKAAIAAALAPYKEREAATKEKIDKLRQEYAAELGKELGVTPEHVNIVPP
D: KAEEIKAERLRLIEEEEDATRVAAAEARLAAIRAVIPAPDTPEDEVFVRVLELEAAEAALARAVAEPEDEEALRAATEVWKPFGVTLADLRDIAARLHEARRLRRQSYS
input PDB
Selected Chain(s) D,E
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:19)
Show buried residues

Minimal score value
-2.467
Maximal score value
1.7704
Average score
-0.6323
Total score value
-137.8397

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K D -1.6989
2 A D -0.6074
3 E D -2.1365
4 E D -2.1378
5 I D 0.0000
6 K D -0.6717
7 A D -0.4189
8 E D -1.7053
9 R D 0.0000
10 L D 0.0252
11 R D -1.7420
12 L D -0.2137
13 I D 0.2381
14 E D -0.9811
15 E D -1.4859
16 E D 0.0000
17 E D -1.1912
18 D D -0.4601
19 A D -0.0354
20 T D -0.3612
21 R D -1.8484
22 V D 0.0000
23 A D 0.0000
24 A D 0.0116
25 A D -0.1443
26 E D -0.8276
27 A D 0.0000
28 R D -1.0889
29 L D -0.1279
30 A D 0.0722
31 A D 0.0000
32 I D 0.0149
33 R D -1.2199
34 A D -0.1116
35 V D 0.3882
36 I D 0.0000
37 P D -0.3765
38 A D -0.0275
39 P D -0.5694
40 D D -1.8348
41 T D -0.4235
42 P D -0.4380
43 E D -1.1106
44 D D -0.8065
45 E D -1.7683
46 V D -0.0144
47 F D 0.0000
48 V D 0.0678
49 R D -0.8719
50 V D 0.0982
51 L D -0.0804
52 E D -1.8638
53 L D 0.0000
54 E D -0.3909
55 A D -0.2293
56 A D 0.0000
57 E D -0.6541
58 A D 0.0000
59 A D 0.0085
60 L D 0.0000
61 A D -0.1037
62 R D -0.7679
63 A D 0.0000
64 V D 0.2131
65 A D -0.3731
66 E D -1.7906
67 P D -0.7168
68 E D -1.9641
69 D D -1.2645
70 E D -1.5747
71 E D -2.0272
72 A D 0.0000
73 L D 0.0000
74 R D -1.8389
75 A D -0.3216
76 A D 0.0000
77 T D 0.0000
78 E D -1.6927
79 V D 0.3284
80 W D 0.0000
81 K D -1.7454
82 P D -0.4684
83 F D 0.3422
84 G D -0.3728
85 V D 0.0000
86 T D 0.0261
87 L D 0.4047
88 A D 0.0346
89 D D -0.5379
90 L D 0.0000
91 R D -1.1281
92 D D -0.7782
93 I D 0.0000
94 A D 0.0000
95 A D -0.2473
96 R D -0.9555
97 L D -0.0702
98 H D -0.6263
99 E D -1.2082
100 A D 0.0000
101 R D -0.9176
102 R D -2.0289
103 L D 0.0000
104 R D -0.7618
105 R D -0.9253
106 Q D -1.3070
107 S D 0.0000
108 Y D 0.9470
109 S D -0.0491
1 N E -1.6718
2 R E -2.3953
3 D E -2.0702
4 A E -0.2458
5 A E -0.1645
6 S E -0.8358
7 R E -1.8327
8 A E -0.6353
9 D E -1.9363
10 I E -0.3897
11 A E -0.2760
12 E E -2.2881
13 R E -1.8560
14 A E 0.0000
15 A E -0.2222
16 A E -0.0826
17 L E -0.0268
18 E E -0.6791
19 A E -0.2370
20 E E -0.8540
21 V E 0.0000
22 A E 0.0881
23 A E -0.3844
24 R E -0.7095
25 L E -0.2322
26 E E -1.8366
27 A E -0.3468
28 F E 0.1873
29 R E -0.7235
30 A E -0.3806
31 R E -1.8335
32 A E 0.0000
33 P E -0.6029
34 E E -1.8627
35 L E 0.0000
36 A E 0.0564
37 A E -0.2614
38 E E -0.7206
39 M E -0.2699
40 E E -1.4452
41 A E -0.2811
42 A E -0.1595
43 R E -1.5703
44 R E -2.4470
45 R E -1.6571
46 A E 0.0000
47 E E -2.3197
48 E E -2.2798
49 I E 0.0000
50 L E 0.1883
51 A E -0.3958
52 E E -2.1510
53 R E -2.2278
54 P E -0.9211
55 D E -1.7925
56 L E -0.0618
57 A E -0.3078
58 E E -1.9892
59 A E -0.3113
60 L E 0.0000
61 K E -1.8777
62 A E -0.2545
63 A E 0.0986
64 I E 0.4155
65 A E 0.1328
66 A E 0.0697
67 A E 0.1005
68 L E 0.2206
69 A E 0.0150
70 P E -0.1832
71 Y E -0.0618
72 K E -1.9585
73 E E -2.2686
74 R E -1.2392
75 E E -1.0291
76 A E -0.3790
77 A E -0.0209
78 T E -0.4249
79 K E -1.6080
80 E E -2.4670
81 K E -1.6890
82 I E 0.0000
83 D E -2.3450
84 K E -2.1269
85 L E -0.4140
86 R E -0.7879
87 Q E -1.4703
88 E E -1.7289
89 Y E -0.1089
90 A E 0.0000
91 A E -0.2441
92 E E -0.4141
93 L E 0.1539
94 G E 0.0000
95 K E -2.0210
96 E E -1.8462
97 L E 1.1436
98 G E -0.0330
99 V E 0.7942
100 T E 0.0906
101 P E -0.4182
102 E E -2.0291
103 H E -1.3130
104 V E -0.2465
105 N E -1.1988
106 I E 0.3241
107 V E 1.7704
108 P E 0.0151
109 P E -0.2967
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Laboratory of Theory of Biopolymers 2018