Project name: query_structure

Status: done

Started: 2026-03-16 23:57:26
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Chain sequence(s) A: MAQVQLLESGGGLVQPGGSLRLSCAASGVRVNYKSMSWVRQAPGKGLEWVSTITSRNGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCATGRAHHAPVRYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:06)
Show buried residues

Minimal score value
-3.0665
Maximal score value
1.5999
Average score
-0.6948
Total score value
-84.0719

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8466
2 A A -0.0274
3 Q A -0.9479
4 V A -0.7198
5 Q A -0.5527
6 L A 0.0000
7 L A 0.6082
8 E A 0.1088
9 S A -0.4085
10 G A -0.6561
11 G A 0.1143
12 G A 0.7080
13 L A 1.4252
14 V A -0.0821
15 Q A -1.4118
16 P A -1.7743
17 G A -1.5363
18 G A -1.0204
19 S A -1.2998
20 L A -0.9031
21 R A -2.1227
22 L A 0.0000
23 S A -0.4983
24 C A 0.0000
25 A A -0.2060
26 A A 0.0000
27 S A -0.5811
28 G A -0.5850
29 V A -0.7987
30 R A -2.5526
31 V A 0.0000
32 N A -2.6147
33 Y A 0.0000
34 K A -2.5465
35 S A -1.4427
36 M A 0.0000
37 S A 0.4655
38 W A 0.0000
39 V A 0.0000
40 R A 0.0000
41 Q A -0.1880
42 A A -0.8602
43 P A -1.2471
44 G A -1.3266
45 K A -1.8271
46 G A -0.6992
47 L A 0.8437
48 E A 0.3333
49 W A 0.5486
50 V A 0.0000
51 S A 0.0000
52 T A 0.3881
53 I A 0.0000
54 T A -1.4177
55 S A -2.3378
56 R A -3.0665
57 N A -2.4775
58 G A -1.5479
59 S A -0.7681
60 T A 0.2165
61 Y A 0.6332
62 Y A -0.3176
63 A A -1.0185
64 D A -2.2718
65 S A -1.7314
66 V A 0.0000
67 K A -2.4698
68 G A -1.7746
69 R A -1.3522
70 F A 0.0000
71 T A -0.7313
72 I A 0.0000
73 S A -0.5612
74 R A -1.2109
75 D A -1.9216
76 N A -2.8672
77 S A -2.1660
78 K A -2.7534
79 N A -2.3838
80 T A -1.3425
81 L A 0.0000
82 Y A -0.6287
83 L A 0.0000
84 Q A -1.2256
85 M A 0.0000
86 N A -1.4999
87 S A -1.4230
88 L A 0.0000
89 R A -2.9203
90 A A -2.0458
91 E A -2.4884
92 D A 0.0000
93 T A -0.4793
94 A A 0.0000
95 V A 0.9399
96 Y A 0.0000
97 Y A 0.4784
98 C A 0.0000
99 A A 0.0000
100 T A 0.0000
101 G A 0.0000
102 R A -2.0347
103 A A -1.6445
104 H A -2.1274
105 H A -1.6261
106 A A -1.2427
107 P A -0.7095
108 V A -0.0215
109 R A -1.1912
110 Y A -0.2851
111 W A 0.3036
112 G A -0.0770
113 Q A -0.7232
114 G A -0.0069
115 T A 0.5481
116 L A 1.5999
117 V A 0.0000
118 T A 0.3539
119 V A 0.0000
120 S A -0.7357
121 S A -0.4732
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Laboratory of Theory of Biopolymers 2018