| Chain sequence(s) |
A: MAQVQLLESGGGLVQPGGSLRLSCAASGVRVNYKSMSWVRQAPGKGLEWVSTITSRNGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCATGRAHHAPVRYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8466 | |
| 2 | A | A | -0.0274 | |
| 3 | Q | A | -0.9479 | |
| 4 | V | A | -0.7198 | |
| 5 | Q | A | -0.5527 | |
| 6 | L | A | 0.0000 | |
| 7 | L | A | 0.6082 | |
| 8 | E | A | 0.1088 | |
| 9 | S | A | -0.4085 | |
| 10 | G | A | -0.6561 | |
| 11 | G | A | 0.1143 | |
| 12 | G | A | 0.7080 | |
| 13 | L | A | 1.4252 | |
| 14 | V | A | -0.0821 | |
| 15 | Q | A | -1.4118 | |
| 16 | P | A | -1.7743 | |
| 17 | G | A | -1.5363 | |
| 18 | G | A | -1.0204 | |
| 19 | S | A | -1.2998 | |
| 20 | L | A | -0.9031 | |
| 21 | R | A | -2.1227 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4983 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.2060 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.5811 | |
| 28 | G | A | -0.5850 | |
| 29 | V | A | -0.7987 | |
| 30 | R | A | -2.5526 | |
| 31 | V | A | 0.0000 | |
| 32 | N | A | -2.6147 | |
| 33 | Y | A | 0.0000 | |
| 34 | K | A | -2.5465 | |
| 35 | S | A | -1.4427 | |
| 36 | M | A | 0.0000 | |
| 37 | S | A | 0.4655 | |
| 38 | W | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -0.1880 | |
| 42 | A | A | -0.8602 | |
| 43 | P | A | -1.2471 | |
| 44 | G | A | -1.3266 | |
| 45 | K | A | -1.8271 | |
| 46 | G | A | -0.6992 | |
| 47 | L | A | 0.8437 | |
| 48 | E | A | 0.3333 | |
| 49 | W | A | 0.5486 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | T | A | 0.3881 | |
| 53 | I | A | 0.0000 | |
| 54 | T | A | -1.4177 | |
| 55 | S | A | -2.3378 | |
| 56 | R | A | -3.0665 | |
| 57 | N | A | -2.4775 | |
| 58 | G | A | -1.5479 | |
| 59 | S | A | -0.7681 | |
| 60 | T | A | 0.2165 | |
| 61 | Y | A | 0.6332 | |
| 62 | Y | A | -0.3176 | |
| 63 | A | A | -1.0185 | |
| 64 | D | A | -2.2718 | |
| 65 | S | A | -1.7314 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.4698 | |
| 68 | G | A | -1.7746 | |
| 69 | R | A | -1.3522 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.7313 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.5612 | |
| 74 | R | A | -1.2109 | |
| 75 | D | A | -1.9216 | |
| 76 | N | A | -2.8672 | |
| 77 | S | A | -2.1660 | |
| 78 | K | A | -2.7534 | |
| 79 | N | A | -2.3838 | |
| 80 | T | A | -1.3425 | |
| 81 | L | A | 0.0000 | |
| 82 | Y | A | -0.6287 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.2256 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.4999 | |
| 87 | S | A | -1.4230 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.9203 | |
| 90 | A | A | -2.0458 | |
| 91 | E | A | -2.4884 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.4793 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.9399 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.4784 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | T | A | 0.0000 | |
| 101 | G | A | 0.0000 | |
| 102 | R | A | -2.0347 | |
| 103 | A | A | -1.6445 | |
| 104 | H | A | -2.1274 | |
| 105 | H | A | -1.6261 | |
| 106 | A | A | -1.2427 | |
| 107 | P | A | -0.7095 | |
| 108 | V | A | -0.0215 | |
| 109 | R | A | -1.1912 | |
| 110 | Y | A | -0.2851 | |
| 111 | W | A | 0.3036 | |
| 112 | G | A | -0.0770 | |
| 113 | Q | A | -0.7232 | |
| 114 | G | A | -0.0069 | |
| 115 | T | A | 0.5481 | |
| 116 | L | A | 1.5999 | |
| 117 | V | A | 0.0000 | |
| 118 | T | A | 0.3539 | |
| 119 | V | A | 0.0000 | |
| 120 | S | A | -0.7357 | |
| 121 | S | A | -0.4732 |