Project name: query_structure

Status: done

Started: 2026-03-16 23:22:26
Settings
Chain sequence(s) A: GILDTLKQFAKGVGKDLVKGAAQGVLSTVSCKLAKTC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-1.8838
Maximal score value
2.3178
Average score
0.1003
Total score value
3.7109

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.4507
2 I A 1.9787
3 L A 1.4076
4 D A -0.6904
5 T A 0.3702
6 L A 1.1605
7 K A -0.9881
8 Q A -0.9295
9 F A 0.8477
10 A A -0.3964
11 K A -1.5860
12 G A -0.6515
13 V A 0.7294
14 G A -0.3728
15 K A -1.7106
16 D A -1.8838
17 L A 0.3228
18 V A 0.2715
19 K A -1.6464
20 G A -0.7047
21 A A 0.4337
22 A A -0.1013
23 Q A -0.5648
24 G A 0.5706
25 V A 1.9010
26 L A 2.3178
27 S A 1.1087
28 T A 0.0000
29 V A 1.8990
30 S A 1.0899
31 C A 0.5887
32 K A -0.4229
33 L A 0.7461
34 A A -0.1895
35 K A -1.3127
36 T A -0.3593
37 C A 0.0270
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Laboratory of Theory of Biopolymers 2018