Project name: query_structure

Status: done

Started: 2026-03-16 23:38:33
Settings
Chain sequence(s) A: GSTPCGESCVWIPCISGIVGCSCSNKVCYMD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-1.8251
Maximal score value
3.093
Average score
0.4881
Total score value
15.1296

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8680
2 S A -0.9347
3 T A -0.5872
4 P A -0.3928
5 C A 0.1341
6 G A -0.2759
7 E A 0.0625
8 S A 0.4450
9 C A 1.1154
10 V A 1.9148
11 W A 2.1046
12 I A 1.7274
13 P A 1.1628
14 C A 1.7727
15 I A 2.6036
16 S A 2.0908
17 G A 1.9452
18 I A 3.0930
19 V A 2.8074
20 G A 0.9161
21 C A 0.0000
22 S A 0.1685
23 C A 0.2451
24 S A -0.5393
25 N A -1.5522
26 K A -1.0788
27 V A -0.3104
28 C A 0.0000
29 Y A -0.4756
30 M A -0.3394
31 D A -1.8251
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Laboratory of Theory of Biopolymers 2018