| Chain sequence(s) |
A: SEAKERASDLKAEAAARALAIIDAARAAVAAADPALAPLALAASGEAASAIALGMQEGLEVGVERVREVAERAPPAMAAALREAARLLEEAGRRVEELL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -2.2324 | |
| 2 | E | A | -3.4959 | |
| 3 | A | A | -2.7689 | |
| 4 | K | A | -3.6555 | |
| 5 | E | A | -4.7976 | |
| 6 | R | A | -4.2297 | |
| 7 | A | A | 0.0000 | |
| 8 | S | A | -3.2481 | |
| 9 | D | A | -3.8589 | |
| 10 | L | A | 0.0000 | |
| 11 | K | A | -2.4982 | |
| 12 | A | A | -2.0092 | |
| 13 | E | A | -2.7399 | |
| 14 | A | A | 0.0000 | |
| 15 | A | A | 0.0000 | |
| 16 | A | A | -1.0896 | |
| 17 | R | A | -1.9071 | |
| 18 | A | A | 0.0000 | |
| 19 | L | A | -0.1619 | |
| 20 | A | A | -0.4430 | |
| 21 | I | A | -0.2182 | |
| 22 | I | A | 0.0000 | |
| 23 | D | A | -1.0891 | |
| 24 | A | A | -0.4050 | |
| 25 | A | A | -0.2141 | |
| 26 | R | A | -0.2812 | |
| 27 | A | A | -0.2472 | |
| 28 | A | A | -0.3572 | |
| 29 | V | A | 0.0000 | |
| 30 | A | A | -0.0313 | |
| 31 | A | A | -0.2255 | |
| 32 | A | A | -0.3924 | |
| 33 | D | A | -0.8724 | |
| 34 | P | A | -0.4576 | |
| 35 | A | A | -0.0689 | |
| 36 | L | A | 0.4395 | |
| 37 | A | A | 0.4184 | |
| 38 | P | A | 0.7693 | |
| 39 | L | A | 1.0714 | |
| 40 | A | A | 0.0000 | |
| 41 | L | A | 1.0455 | |
| 42 | A | A | 0.3301 | |
| 43 | A | A | 0.0000 | |
| 44 | S | A | 0.0000 | |
| 45 | G | A | -1.0291 | |
| 46 | E | A | -2.2682 | |
| 47 | A | A | 0.0000 | |
| 48 | A | A | -0.7309 | |
| 49 | S | A | -1.0122 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | A | A | -0.4404 | |
| 53 | L | A | -0.8244 | |
| 54 | G | A | 0.0000 | |
| 55 | M | A | -0.9382 | |
| 56 | Q | A | -1.7820 | |
| 57 | E | A | -2.4093 | |
| 58 | G | A | -1.5978 | |
| 59 | L | A | 0.0000 | |
| 60 | E | A | -3.2697 | |
| 61 | V | A | -1.9898 | |
| 62 | G | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | E | A | -4.0305 | |
| 65 | R | A | -3.9714 | |
| 66 | V | A | 0.0000 | |
| 67 | R | A | -4.8408 | |
| 68 | E | A | -4.8019 | |
| 69 | V | A | -3.6112 | |
| 70 | A | A | 0.0000 | |
| 71 | E | A | -3.8273 | |
| 72 | R | A | -3.1221 | |
| 73 | A | A | -1.3540 | |
| 74 | P | A | 0.0000 | |
| 75 | P | A | -0.6913 | |
| 76 | A | A | -0.1211 | |
| 77 | M | A | 0.0000 | |
| 78 | A | A | -1.7372 | |
| 79 | A | A | -1.0338 | |
| 80 | A | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | R | A | -3.3385 | |
| 83 | E | A | -2.3129 | |
| 84 | A | A | 0.0000 | |
| 85 | A | A | 0.0000 | |
| 86 | R | A | -3.5189 | |
| 87 | L | A | -2.6122 | |
| 88 | L | A | 0.0000 | |
| 89 | E | A | -4.2720 | |
| 90 | E | A | -4.1427 | |
| 91 | A | A | 0.0000 | |
| 92 | G | A | -3.8087 | |
| 93 | R | A | -4.7748 | |
| 94 | R | A | -4.0066 | |
| 95 | V | A | 0.0000 | |
| 96 | E | A | -3.2817 | |
| 97 | E | A | -2.9047 | |
| 98 | L | A | -1.3979 | |
| 99 | L | A | -0.0219 |