| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHEGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDVAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGHPLPDAPPPSPLYVPPPASSPEAVRPSTNYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9420 | |
| 2 | L | A | 1.9608 | |
| 3 | P | A | 0.8378 | |
| 4 | P | A | 0.3829 | |
| 5 | T | A | 0.1247 | |
| 6 | T | A | 0.1296 | |
| 7 | P | A | 0.1825 | |
| 8 | V | A | 1.2147 | |
| 9 | A | A | 0.0853 | |
| 10 | K | A | -1.0284 | |
| 11 | V | A | -0.1658 | |
| 12 | Q | A | -1.3886 | |
| 13 | S | A | -1.5341 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3820 | |
| 16 | E | A | -2.4186 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4663 | |
| 20 | P | A | 0.1317 | |
| 21 | T | A | 0.1585 | |
| 22 | S | A | -0.0972 | |
| 23 | L | A | 0.0906 | |
| 24 | F | A | -0.0409 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2832 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8941 | |
| 31 | R | A | -2.6781 | |
| 32 | L | A | -0.7954 | |
| 33 | L | A | 1.1576 | |
| 34 | T | A | 1.3585 | |
| 35 | V | A | 1.8265 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7152 | |
| 40 | R | A | -1.7754 | |
| 41 | D | A | -0.9396 | |
| 42 | I | A | 0.8230 | |
| 43 | V | A | 1.0166 | |
| 44 | K | A | -1.1820 | |
| 45 | N | A | -1.9285 | |
| 46 | G | A | -1.2285 | |
| 47 | K | A | -0.9652 | |
| 48 | V | A | 1.4529 | |
| 49 | V | A | 2.0377 | |
| 50 | V | A | 1.2470 | |
| 51 | P | A | 0.4302 | |
| 52 | K | A | -0.6602 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1367 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3948 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2698 | |
| 70 | K | A | -1.7887 | |
| 71 | F | A | -0.6360 | |
| 72 | A | A | -0.5717 | |
| 73 | L | A | -0.8587 | |
| 74 | P | A | -1.2042 | |
| 75 | Q | A | -2.5088 | |
| 76 | K | A | -3.1119 | |
| 77 | D | A | -2.9956 | |
| 78 | F | A | -1.6779 | |
| 79 | Y | A | -1.8973 | |
| 80 | D | A | -2.6919 | |
| 81 | P | A | -2.3086 | |
| 82 | E | A | -3.0534 | |
| 83 | K | A | -3.3946 | |
| 84 | E | A | -2.4629 | |
| 85 | R | A | -1.2986 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6851 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9638 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3565 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6871 | |
| 99 | G | A | -0.5218 | |
| 100 | P | A | -0.3830 | |
| 101 | L | A | 0.0876 | |
| 102 | G | A | -0.2239 | |
| 103 | K | A | -0.7063 | |
| 104 | G | A | -0.4949 | |
| 105 | T | A | -0.4639 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1673 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.2041 | |
| 110 | L | A | -0.1674 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3061 | |
| 113 | K | A | -0.6640 | |
| 114 | L | A | -1.1537 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1572 | |
| 117 | T | A | -0.8149 | |
| 118 | E | A | -1.7395 | |
| 119 | N | A | -1.9502 | |
| 120 | P | A | -1.3038 | |
| 121 | T | A | -0.6648 | |
| 122 | A | A | -0.3325 | |
| 123 | P | A | -0.4991 | |
| 124 | V | A | -0.3621 | |
| 125 | H | A | -1.6112 | |
| 126 | E | A | -2.5948 | |
| 127 | G | A | -2.1590 | |
| 128 | A | A | -1.5745 | |
| 129 | D | A | -2.4625 | |
| 130 | D | A | -2.0623 | |
| 131 | R | A | -1.3619 | |
| 132 | V | A | -0.4244 | |
| 133 | N | A | -0.8986 | |
| 134 | F | A | -0.3928 | |
| 135 | S | A | -0.3844 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5017 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2854 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5590 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2182 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1532 | |
| 157 | D | A | 0.4094 | |
| 158 | V | A | 1.0812 | |
| 159 | A | A | 0.8847 | |
| 160 | P | A | 0.0516 | |
| 161 | P | A | 0.4205 | |
| 162 | C | A | 0.5044 | |
| 163 | P | A | 0.0043 | |
| 164 | G | A | -0.0882 | |
| 165 | L | A | 0.5742 | |
| 166 | P | A | -0.1075 | |
| 167 | P | A | -0.3371 | |
| 168 | G | A | -0.4190 | |
| 169 | A | A | -0.0196 | |
| 170 | C | A | 0.7243 | |
| 171 | P | A | 0.7061 | |
| 172 | P | A | 1.1943 | |
| 173 | I | A | 2.3322 | |
| 174 | Q | A | 1.2329 | |
| 175 | L | A | 1.5323 | |
| 176 | V | A | 0.8594 | |
| 177 | N | A | -0.2960 | |
| 178 | S | A | -0.0938 | |
| 179 | V | A | 0.4271 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3811 | |
| 182 | D | A | 0.0834 | |
| 183 | G | A | -0.1611 | |
| 184 | D | A | -0.5477 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0973 | |
| 190 | F | A | 0.0582 | |
| 191 | G | A | -0.1045 | |
| 192 | N | A | -0.2730 | |
| 193 | M | A | -0.1718 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.5686 | |
| 197 | E | A | -2.9582 | |
| 198 | L | A | -1.3957 | |
| 199 | Q | A | -2.6569 | |
| 200 | Q | A | -3.4078 | |
| 201 | D | A | -3.6146 | |
| 202 | R | A | -3.4074 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | -0.0259 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4511 | |
| 211 | S | A | -1.9735 | |
| 212 | T | A | -1.4903 | |
| 213 | R | A | -2.1466 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1656 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3733 | |
| 220 | L | A | 0.6056 | |
| 221 | K | A | -1.1042 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8123 | |
| 224 | N | A | -1.4912 | |
| 225 | E | A | -1.2348 | |
| 226 | A | A | -0.6030 | |
| 227 | Y | A | -0.3625 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6752 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0735 | |
| 234 | F | A | 0.2558 | |
| 235 | G | A | -0.8414 | |
| 236 | R | A | -2.6540 | |
| 237 | R | A | -2.9918 | |
| 238 | E | A | -2.2186 | |
| 239 | Q | A | -0.2706 | |
| 240 | V | A | 1.3642 | |
| 241 | Y | A | 1.0926 | |
| 242 | A | A | 0.2416 | |
| 243 | R | A | -0.8710 | |
| 244 | H | A | -0.9017 | |
| 245 | F | A | 0.0575 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.1168 | |
| 248 | R | A | -0.5872 | |
| 249 | S | A | -1.4455 | |
| 250 | G | A | -1.1941 | |
| 251 | P | A | -1.2065 | |
| 252 | D | A | -1.4079 | |
| 253 | G | A | -1.2374 | |
| 254 | H | A | -1.4273 | |
| 255 | P | A | -1.3831 | |
| 256 | L | A | -0.4889 | |
| 257 | P | A | -0.8936 | |
| 258 | D | A | -1.7488 | |
| 259 | A | A | -0.5713 | |
| 260 | P | A | -0.6846 | |
| 261 | P | A | -0.2005 | |
| 262 | P | A | 0.0553 | |
| 263 | S | A | 0.2837 | |
| 264 | P | A | 0.7088 | |
| 265 | L | A | 1.6796 | |
| 266 | Y | A | 1.5143 | |
| 267 | V | A | 1.9224 | |
| 268 | P | A | 0.2739 | |
| 269 | P | A | -0.1222 | |
| 270 | P | A | -0.4591 | |
| 271 | A | A | -0.2789 | |
| 272 | S | A | -0.4258 | |
| 273 | S | A | -0.6418 | |
| 274 | P | A | -0.9203 | |
| 275 | E | A | -1.5998 | |
| 276 | A | A | -0.3885 | |
| 277 | V | A | 0.5613 | |
| 278 | R | A | -0.5239 | |
| 279 | P | A | -0.9520 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4648 | |
| 282 | N | A | -0.5480 | |
| 283 | Y | A | 0.9721 | |
| 284 | F | A | 0.7402 | |
| 285 | G | A | 0.2367 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8963 | |
| 291 | L | A | 1.5940 | |
| 292 | V | A | 0.6221 | |
| 293 | S | A | -0.1523 | |
| 294 | S | A | -0.9542 | |
| 295 | D | A | -1.8437 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1260 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6507 | |
| 301 | R | A | -1.8536 | |
| 302 | P | A | -0.9596 | |
| 303 | F | A | -0.1977 | |
| 304 | W | A | -0.5706 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0902 | |
| 307 | R | A | -2.8307 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2566 | |
| 310 | G | A | -1.2181 | |
| 311 | N | A | -1.2551 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8142 | |
| 319 | N | A | -0.9303 | |
| 320 | E | A | -1.0340 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3370 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1064 | |
| 333 | N | A | 0.5346 | |
| 334 | F | A | 1.7219 | |
| 335 | T | A | 0.8344 | |
| 336 | I | A | 0.4037 | |
| 337 | S | A | -0.8367 | |
| 338 | Q | A | -1.4652 | |
| 339 | Q | A | -1.1119 | |
| 340 | L | A | 0.5687 | |
| 341 | C | A | -0.0679 | |
| 342 | T | A | -0.4646 | |
| 343 | P | A | -1.1961 | |
| 344 | E | A | -1.7458 | |
| 345 | P | A | -0.7317 | |
| 346 | N | A | -0.7558 | |
| 347 | V | A | 1.2956 | |
| 348 | Y | A | 1.2313 | |
| 349 | D | A | 0.0415 | |
| 350 | P | A | -0.3459 | |
| 351 | S | A | -0.2748 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5629 | |
| 354 | K | A | -1.6630 | |
| 355 | N | A | -1.7070 | |
| 356 | Y | A | -0.1036 | |
| 357 | L | A | 0.6444 | |
| 358 | R | A | 0.9817 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3942 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0781 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0346 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6842 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3027 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3081 | |
| 376 | L | A | -1.7011 | |
| 377 | D | A | -1.9714 | |
| 378 | P | A | -1.0271 | |
| 379 | G | A | -1.0070 | |
| 380 | V | A | -0.9256 | |
| 381 | L | A | -0.5225 | |
| 382 | A | A | -0.6511 | |
| 383 | H | A | -0.8061 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4178 | |
| 386 | T | A | -0.5576 | |
| 387 | M | A | -0.3031 | |
| 388 | N | A | -0.8679 | |
| 389 | P | A | -1.2443 | |
| 390 | T | A | -1.4436 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4614 | |
| 393 | E | A | -2.8022 | |
| 394 | N | A | -2.3932 | |
| 395 | W | A | -1.4121 | |
| 396 | N | A | -1.2224 | |
| 397 | L | A | -0.2431 | |
| 398 | G | A | 0.4877 | |
| 399 | F | A | 2.3935 | |
| 400 | V | A | 1.8007 | |
| 401 | P | A | 0.0298 | |
| 402 | P | A | -1.8550 | |
| 403 | K | A | -3.3075 | |
| 404 | E | A | -3.7607 | |
| 405 | R | A | -3.8780 | |
| 406 | E | A | -3.7726 | |
| 407 | D | A | -2.8627 | |
| 408 | P | A | -1.7620 | |
| 409 | Y | A | -0.9906 | |
| 410 | K | A | -2.1187 | |
| 411 | G | A | -0.6364 | |
| 412 | L | A | 0.6772 | |
| 413 | I | A | 1.5924 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3765 | |
| 416 | E | A | -1.6550 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9393 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0533 | |
| 421 | E | A | -2.7835 | |
| 422 | R | A | -2.6366 | |
| 423 | F | A | -1.2837 | |
| 424 | S | A | -1.4689 | |
| 425 | Q | A | -1.8532 | |
| 426 | D | A | -2.9719 | |
| 427 | L | A | -2.1686 | |
| 428 | D | A | -3.0347 | |
| 429 | Q | A | -2.7580 | |
| 430 | F | A | -1.6134 | |
| 431 | A | A | -1.1374 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2700 | |
| 435 | K | A | -1.0868 | |
| 436 | F | A | -0.1110 | |
| 437 | L | A | 0.7848 | |
| 438 | Y | A | 0.6252 | |
| 439 | Q | A | -0.3884 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine