Project name: query_structure

Status: done

Started: 2026-03-16 23:34:54
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Chain sequence(s) A: GSSVPTNLEVVAATPTSLLISWDAYYSYYSYSVSYYRITYGETGGNSPVQEFTVPYYYSTATISGLKPGVDYTITVYAYSSYSSSSYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-2.5068
Maximal score value
2.51
Average score
-0.0542
Total score value
-5.2041

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.0898
2 S A -0.0127
3 S A 0.0000
4 V A 0.3195
5 P A 0.0000
6 T A -1.0181
7 N A -1.9911
8 L A 0.0000
9 E A -1.7275
10 V A 0.1457
11 V A 1.5428
12 A A 0.9085
13 A A 0.3050
14 T A -0.3349
15 P A -1.1092
16 T A -0.9880
17 S A -0.5130
18 L A 0.0000
19 L A 0.7749
20 I A 0.0000
21 S A -0.4339
22 W A 0.0000
23 D A -1.1650
24 A A 0.6890
25 Y A 1.5016
26 Y A 2.5015
27 S A 1.9500
28 Y A 2.5100
29 Y A 2.2551
30 S A 1.5978
31 Y A 2.0764
32 S A 1.5393
33 V A 0.0000
34 S A 0.9472
35 Y A 1.1097
36 Y A 0.0000
37 R A -0.3567
38 I A 0.0000
39 T A 0.0000
40 Y A -0.3322
41 G A 0.0000
42 E A -1.5755
43 T A -1.2538
44 G A -1.2399
45 G A -1.4299
46 N A -1.5586
47 S A -0.8720
48 P A -0.3329
49 V A 0.4395
50 Q A -0.8654
51 E A -1.6454
52 F A -0.6373
53 T A 0.0774
54 V A 0.8985
55 P A 1.2276
56 Y A 2.1388
57 Y A 2.4110
58 Y A 1.8462
59 S A 0.7836
60 T A 0.3817
61 A A 0.0000
62 T A 0.3186
63 I A 0.0000
64 S A -0.6484
65 G A -1.0261
66 L A 0.0000
67 K A -2.3703
68 P A -1.6632
69 G A -1.4529
70 V A -1.4161
71 D A -2.0660
72 Y A 0.0000
73 T A -0.7771
74 I A 0.0000
75 T A -0.3467
76 V A 0.0000
77 Y A 0.1365
78 A A 0.0000
79 Y A 0.5658
80 S A 0.0000
81 S A 0.6226
82 Y A 1.3716
83 S A 0.5757
84 S A -0.0503
85 S A -0.1140
86 S A -0.0447
87 Y A 0.1568
88 S A -0.0705
89 P A -0.0468
90 I A 0.1210
91 S A -0.5037
92 I A -0.6861
93 N A -1.7286
94 Y A -1.4549
95 R A -2.5068
96 T A -1.4950
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Laboratory of Theory of Biopolymers 2018