| Chain sequence(s) |
A: SCSALPSSVTLTSNEKLVDLFTHFNGTKVTTKAEFACRQAELSELIQRYELGTLPGRPSTLTASFSGNTLTINCGENGKSISFTVTITYPSSGTAPYPAIIGFGGGSIPQPSGVALINFNNDEIAKQTSSSSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELTPAAKIDTTKIGVTGCSRNGKGALVAGAFEKRIVLTIPQESGMGGSACWRISDYEKSQGKNIQTASEIVGEYPWFSTTFNSYVNKVELLPFDHHHLAALIAPRGLLVIDNVIDWLGPESCYGCMTAARRAWQALGVPDNMGYSQIGSHAHCAFPSSQQAQLTAFVNKFLLGQSVNTAIFTSPFSANESQWIDWTTPTLS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:23)
[INFO] Main: Simulation completed successfully. (00:08:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.0694 | |
| 2 | C | A | 0.2386 | |
| 3 | S | A | -0.2069 | |
| 4 | A | A | -0.0756 | |
| 5 | L | A | -0.2323 | |
| 6 | P | A | -0.3496 | |
| 7 | S | A | -0.3083 | |
| 8 | S | A | -0.1935 | |
| 9 | V | A | 0.1156 | |
| 10 | T | A | 0.1701 | |
| 11 | L | A | 0.2140 | |
| 12 | T | A | -0.1761 | |
| 13 | S | A | -1.1910 | |
| 14 | N | A | -1.7796 | |
| 15 | E | A | -2.6240 | |
| 16 | K | A | -2.1501 | |
| 17 | L | A | 0.0000 | |
| 18 | V | A | -0.7225 | |
| 19 | D | A | -0.7010 | |
| 20 | L | A | 0.0000 | |
| 21 | F | A | 0.0000 | |
| 22 | T | A | -1.0923 | |
| 23 | H | A | -1.0349 | |
| 24 | F | A | -0.4000 | |
| 25 | N | A | -1.4685 | |
| 26 | G | A | -1.3894 | |
| 27 | T | A | -1.4733 | |
| 28 | K | A | -2.1106 | |
| 29 | V | A | 0.0000 | |
| 30 | T | A | -0.9940 | |
| 31 | T | A | -1.1178 | |
| 32 | K | A | -1.4376 | |
| 33 | A | A | -0.8049 | |
| 34 | E | A | -1.2080 | |
| 35 | F | A | 0.0000 | |
| 36 | A | A | -0.3861 | |
| 37 | C | A | -0.2339 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.3820 | |
| 40 | A | A | -0.3109 | |
| 41 | E | A | -0.3753 | |
| 42 | L | A | 0.0000 | |
| 43 | S | A | -0.6538 | |
| 44 | E | A | -1.1339 | |
| 45 | L | A | 0.0000 | |
| 46 | I | A | 0.0000 | |
| 47 | Q | A | -0.7008 | |
| 48 | R | A | -0.7708 | |
| 49 | Y | A | -0.4402 | |
| 50 | E | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | T | A | -0.3316 | |
| 54 | L | A | -0.2133 | |
| 55 | P | A | -0.5268 | |
| 56 | G | A | -1.3353 | |
| 57 | R | A | -2.1501 | |
| 58 | P | A | 0.0000 | |
| 59 | S | A | -1.0595 | |
| 60 | T | A | -0.9247 | |
| 61 | L | A | -0.2910 | |
| 62 | T | A | 0.0759 | |
| 63 | A | A | -0.0210 | |
| 64 | S | A | 0.0509 | |
| 65 | F | A | -0.1025 | |
| 66 | S | A | -0.5684 | |
| 67 | G | A | -0.9268 | |
| 68 | N | A | -1.0812 | |
| 69 | T | A | -0.6943 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.1854 | |
| 72 | I | A | 0.0000 | |
| 73 | N | A | -0.5241 | |
| 74 | C | A | 0.0000 | |
| 75 | G | A | -1.4754 | |
| 76 | E | A | -1.8764 | |
| 77 | N | A | -2.1757 | |
| 78 | G | A | -2.0214 | |
| 79 | K | A | -2.7334 | |
| 80 | S | A | -1.8029 | |
| 81 | I | A | 0.0000 | |
| 82 | S | A | -0.4018 | |
| 83 | F | A | 0.0000 | |
| 84 | T | A | -0.5494 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -0.7145 | |
| 87 | I | A | 0.0000 | |
| 88 | T | A | -0.2317 | |
| 89 | Y | A | -0.1020 | |
| 90 | P | A | -0.2419 | |
| 91 | S | A | -0.3709 | |
| 92 | S | A | -0.4780 | |
| 93 | G | A | -0.5421 | |
| 94 | T | A | -0.4872 | |
| 95 | A | A | -0.5180 | |
| 96 | P | A | -0.8251 | |
| 97 | Y | A | -0.3858 | |
| 98 | P | A | -0.3339 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | G | A | -1.3909 | |
| 105 | G | A | -0.8848 | |
| 106 | G | A | -0.4759 | |
| 107 | S | A | -0.1889 | |
| 108 | I | A | -0.0148 | |
| 109 | P | A | -0.3603 | |
| 110 | Q | A | -0.5979 | |
| 111 | P | A | -0.4818 | |
| 112 | S | A | -0.4712 | |
| 113 | G | A | -0.3568 | |
| 114 | V | A | 0.0000 | |
| 115 | A | A | 0.0000 | |
| 116 | L | A | -0.0702 | |
| 117 | I | A | 0.0000 | |
| 118 | N | A | -1.1657 | |
| 119 | F | A | 0.0000 | |
| 120 | N | A | -2.4017 | |
| 121 | N | A | 0.0000 | |
| 122 | D | A | -2.7720 | |
| 123 | E | A | -2.4835 | |
| 124 | I | A | 0.0000 | |
| 125 | A | A | 0.0000 | |
| 126 | K | A | -2.3422 | |
| 127 | Q | A | -1.5298 | |
| 128 | T | A | -0.7553 | |
| 129 | S | A | -0.6711 | |
| 130 | S | A | -0.7592 | |
| 131 | S | A | -0.8399 | |
| 132 | S | A | 0.0000 | |
| 133 | R | A | -1.2006 | |
| 134 | G | A | 0.0000 | |
| 135 | Q | A | -2.1523 | |
| 136 | G | A | -2.1200 | |
| 137 | K | A | -1.8423 | |
| 138 | F | A | 0.0000 | |
| 139 | Y | A | 0.0000 | |
| 140 | D | A | -2.4650 | |
| 141 | L | A | 0.0000 | |
| 142 | Y | A | -1.0688 | |
| 143 | G | A | -1.1859 | |
| 144 | S | A | -1.1830 | |
| 145 | S | A | -0.6454 | |
| 146 | H | A | -0.4847 | |
| 147 | S | A | -0.3776 | |
| 148 | A | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | A | A | 0.0000 | |
| 151 | M | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | A | A | 0.0000 | |
| 154 | W | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | 0.0000 | |
| 158 | V | A | 0.0000 | |
| 159 | S | A | -0.7517 | |
| 160 | R | A | 0.0000 | |
| 161 | V | A | 0.0000 | |
| 162 | I | A | 0.0000 | |
| 163 | D | A | -0.7813 | |
| 164 | A | A | 0.0000 | |
| 165 | L | A | 0.0000 | |
| 166 | E | A | -1.2466 | |
| 167 | L | A | 0.5766 | |
| 168 | T | A | 0.0000 | |
| 169 | P | A | -0.6145 | |
| 170 | A | A | -0.3672 | |
| 171 | A | A | 0.0000 | |
| 172 | K | A | -1.0207 | |
| 173 | I | A | 0.0000 | |
| 174 | D | A | -0.9978 | |
| 175 | T | A | -1.0682 | |
| 176 | T | A | -0.7050 | |
| 177 | K | A | -0.6319 | |
| 178 | I | A | 0.0000 | |
| 179 | G | A | 0.0000 | |
| 180 | V | A | 0.0000 | |
| 181 | T | A | 0.0000 | |
| 182 | G | A | 0.0000 | |
| 183 | C | A | 0.0000 | |
| 184 | S | A | -0.9265 | |
| 185 | R | A | -1.6143 | |
| 186 | N | A | -1.1848 | |
| 187 | G | A | 0.0000 | |
| 188 | K | A | 0.0000 | |
| 189 | G | A | 0.0000 | |
| 190 | A | A | 0.0000 | |
| 191 | L | A | 0.0000 | |
| 192 | V | A | 0.0000 | |
| 193 | A | A | 0.0000 | |
| 194 | G | A | 0.0000 | |
| 195 | A | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | E | A | 0.0000 | |
| 198 | K | A | -1.9531 | |
| 199 | R | A | -1.4763 | |
| 200 | I | A | 0.0000 | |
| 201 | V | A | -0.3700 | |
| 202 | L | A | 0.0000 | |
| 203 | T | A | 0.0000 | |
| 204 | I | A | 0.0000 | |
| 205 | P | A | 0.0000 | |
| 206 | Q | A | 0.0000 | |
| 207 | E | A | 0.0000 | |
| 208 | S | A | 0.0000 | |
| 209 | G | A | 0.0000 | |
| 210 | M | A | 0.0000 | |
| 211 | G | A | 0.0000 | |
| 212 | G | A | 0.0000 | |
| 213 | S | A | 0.0000 | |
| 214 | A | A | 0.0000 | |
| 215 | C | A | 0.0000 | |
| 216 | W | A | 0.0000 | |
| 217 | R | A | 0.0000 | |
| 218 | I | A | 0.0000 | |
| 219 | S | A | 0.0000 | |
| 220 | D | A | -2.0265 | |
| 221 | Y | A | -0.9139 | |
| 222 | E | A | 0.0000 | |
| 223 | K | A | -2.0787 | |
| 224 | S | A | -1.6179 | |
| 225 | Q | A | -2.0710 | |
| 226 | G | A | -1.9595 | |
| 227 | K | A | -2.3315 | |
| 228 | N | A | -2.2018 | |
| 229 | I | A | 0.0000 | |
| 230 | Q | A | 0.0000 | |
| 231 | T | A | 0.0000 | |
| 232 | A | A | 0.0000 | |
| 233 | S | A | -1.3872 | |
| 234 | E | A | -1.0188 | |
| 235 | I | A | 0.0000 | |
| 236 | V | A | -0.6241 | |
| 237 | G | A | -1.0164 | |
| 238 | E | A | -0.8846 | |
| 239 | Y | A | -0.6928 | |
| 240 | P | A | 0.0000 | |
| 241 | W | A | 0.0000 | |
| 242 | F | A | 0.0000 | |
| 243 | S | A | 0.0000 | |
| 244 | T | A | -0.5924 | |
| 245 | T | A | -0.5849 | |
| 246 | F | A | 0.0000 | |
| 247 | N | A | -1.6371 | |
| 248 | S | A | -1.1134 | |
| 249 | Y | A | -1.0453 | |
| 250 | V | A | 0.0000 | |
| 251 | N | A | -2.2149 | |
| 252 | K | A | -2.0978 | |
| 253 | V | A | 0.0000 | |
| 254 | E | A | -2.1878 | |
| 255 | L | A | -0.8268 | |
| 256 | L | A | 0.0000 | |
| 257 | P | A | 0.0000 | |
| 258 | F | A | 0.0000 | |
| 259 | D | A | 0.0000 | |
| 260 | H | A | 0.0000 | |
| 261 | H | A | 0.0000 | |
| 262 | H | A | 0.0000 | |
| 263 | L | A | 0.0000 | |
| 264 | A | A | 0.0000 | |
| 265 | A | A | 0.0000 | |
| 266 | L | A | 0.0000 | |
| 267 | I | A | 0.0000 | |
| 268 | A | A | 0.0000 | |
| 269 | P | A | -0.4785 | |
| 270 | R | A | -0.5047 | |
| 271 | G | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | L | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | I | A | 0.0000 | |
| 276 | D | A | 0.0000 | |
| 277 | N | A | 0.0000 | |
| 278 | V | A | 0.1347 | |
| 279 | I | A | -0.3485 | |
| 280 | D | A | -1.5185 | |
| 281 | W | A | -0.4057 | |
| 282 | L | A | 0.0000 | |
| 283 | G | A | 0.0000 | |
| 284 | P | A | 0.0000 | |
| 285 | E | A | -0.4940 | |
| 286 | S | A | 0.0000 | |
| 287 | C | A | 0.0000 | |
| 288 | Y | A | 0.0248 | |
| 289 | G | A | 0.0000 | |
| 290 | C | A | 0.0000 | |
| 291 | M | A | 0.0000 | |
| 292 | T | A | -0.2717 | |
| 293 | A | A | 0.0000 | |
| 294 | A | A | 0.0000 | |
| 295 | R | A | -0.7358 | |
| 296 | R | A | -0.9185 | |
| 297 | A | A | 0.0000 | |
| 298 | W | A | 0.0000 | |
| 299 | Q | A | -1.4554 | |
| 300 | A | A | 0.0000 | |
| 301 | L | A | 0.0000 | |
| 302 | G | A | -0.8209 | |
| 303 | V | A | -0.4663 | |
| 304 | P | A | -0.7985 | |
| 305 | D | A | -0.9137 | |
| 306 | N | A | -0.7442 | |
| 307 | M | A | 0.0000 | |
| 308 | G | A | 0.0000 | |
| 309 | Y | A | 0.0000 | |
| 310 | S | A | 0.0000 | |
| 311 | Q | A | 0.0000 | |
| 312 | I | A | 0.4772 | |
| 313 | G | A | -0.0473 | |
| 314 | S | A | -0.1215 | |
| 315 | H | A | -0.1822 | |
| 316 | A | A | -0.1820 | |
| 317 | H | A | -0.4319 | |
| 318 | C | A | -0.0759 | |
| 319 | A | A | 0.0137 | |
| 320 | F | A | 0.0965 | |
| 321 | P | A | -0.1749 | |
| 322 | S | A | -0.4481 | |
| 323 | S | A | -0.3399 | |
| 324 | Q | A | 0.0000 | |
| 325 | Q | A | -0.6137 | |
| 326 | A | A | -0.3474 | |
| 327 | Q | A | -0.4346 | |
| 328 | L | A | 0.0000 | |
| 329 | T | A | -0.3067 | |
| 330 | A | A | -0.4928 | |
| 331 | F | A | 0.0000 | |
| 332 | V | A | 0.0000 | |
| 333 | N | A | -0.6451 | |
| 334 | K | A | -0.8109 | |
| 335 | F | A | -0.2060 | |
| 336 | L | A | 0.0000 | |
| 337 | L | A | -0.1143 | |
| 338 | G | A | -0.8074 | |
| 339 | Q | A | -1.3490 | |
| 340 | S | A | -0.9038 | |
| 341 | V | A | -0.7446 | |
| 342 | N | A | -1.3772 | |
| 343 | T | A | 0.0000 | |
| 344 | A | A | -0.3148 | |
| 345 | I | A | 0.0995 | |
| 346 | F | A | 0.4441 | |
| 347 | T | A | 0.4114 | |
| 348 | S | A | 0.1890 | |
| 349 | P | A | -0.0114 | |
| 350 | F | A | 0.0750 | |
| 351 | S | A | -0.3895 | |
| 352 | A | A | -0.6200 | |
| 353 | N | A | -1.0698 | |
| 354 | E | A | -1.5378 | |
| 355 | S | A | -1.3774 | |
| 356 | Q | A | -1.5529 | |
| 357 | W | A | 0.0000 | |
| 358 | I | A | 0.0000 | |
| 359 | D | A | -2.1068 | |
| 360 | W | A | -0.9050 | |
| 361 | T | A | -0.5082 | |
| 362 | T | A | -0.4218 | |
| 363 | P | A | -0.5296 | |
| 364 | T | A | -0.6061 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.7032 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine