Project name: 7_i14e7_i20e6_x11e6_x4e7

Status: done

Started: 2025-08-11 19:03:00
Settings
Chain sequence(s) A: AAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:41)
Show buried residues

Minimal score value
-4.6142
Maximal score value
3.5187
Average score
-0.3638
Total score value
-94.2142

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2615
2 A A -0.1105
3 Y A 0.2975
4 R A -1.0931
5 A A -0.4320
6 H A -0.0094
7 Y A 0.9054
8 N A -0.0325
9 I A 1.6926
10 V A 2.1560
11 T A 1.7386
12 F A 1.9221
13 A A 1.6926
14 A A 1.4038
15 Y A 1.7970
16 T A 1.3234
17 L A 1.7224
18 Q A 0.4477
19 D A -0.0505
20 I A 1.4057
21 V A 2.3049
22 L A 2.0024
23 H A 1.3535
24 L A 2.3034
25 A A 2.4688
26 A A 2.5410
27 Y A 3.2551
28 L A 3.5187
29 L A 3.5041
30 M A 3.2497
31 G A 2.3610
32 T A 2.4561
33 L A 3.1245
34 G A 2.0198
35 I A 2.0408
36 V A 2.5562
37 A A 1.8145
38 A A 1.1717
39 Y A 1.2839
40 L A 1.3505
41 P A -0.0989
42 A A -1.0688
43 R A -2.5338
44 R A -2.8872
45 A A -2.4204
46 E A -2.8656
47 P A -1.7080
48 Q A -0.8930
49 A A 0.1390
50 A A 0.8971
51 Y A 2.3458
52 V A 3.3226
53 Y A 2.7105
54 D A 0.0000
55 F A 2.7149
56 A A 1.6055
57 F A 1.2260
58 R A -0.5495
59 D A -0.8864
60 L A 0.4620
61 A A 0.0328
62 A A -0.3061
63 Y A 0.2407
64 R A -0.9984
65 F A 0.0446
66 H A -0.6179
67 N A -0.6630
68 I A 0.9319
69 A A 0.5415
70 G A -0.3149
71 H A -0.0783
72 Y A 0.7692
73 A A 1.0021
74 A A 1.0714
75 Y A 1.7727
76 C A 1.6015
77 Y A 1.8101
78 S A 1.3547
79 L A 1.9599
80 Y A 1.6028
81 G A 0.7521
82 T A 0.9314
83 T A 0.7642
84 L A 1.4677
85 A A 0.7547
86 A A 0.5812
87 Y A 1.0534
88 K A -0.1557
89 T A 0.0804
90 V A 0.9349
91 L A 0.1920
92 E A -0.8551
93 L A 1.2654
94 T A 0.2897
95 E A -0.6879
96 V A 1.1225
97 A A 0.2494
98 A A -0.6285
99 Y A 0.0641
100 A A -0.9745
101 E A -2.8799
102 K A -2.7252
103 L A -2.1357
104 R A -3.9714
105 H A -3.9147
106 L A -3.1344
107 N A -4.0094
108 E A -4.6142
109 K A -4.0263
110 R A -4.5428
111 R A -3.9770
112 F A -1.6011
113 H A -2.7430
114 N A -2.9530
115 G A -1.6586
116 P A -1.2041
117 G A -1.0314
118 P A -0.6627
119 G A -0.7616
120 L A -0.5047
121 D A -2.6894
122 K A -3.5671
123 K A -3.6758
124 Q A -3.1384
125 R A -2.4479
126 F A -0.0141
127 H A -0.8799
128 N A -0.9938
129 I A 0.1287
130 R A -1.8114
131 G A -1.5486
132 R A -1.7294
133 W A -0.1500
134 T A -0.2012
135 G A -0.3595
136 P A -0.5790
137 G A -1.0509
138 P A -1.1471
139 G A -1.9188
140 N A -2.4521
141 P A -1.9160
142 A A -1.9834
143 E A -3.3318
144 K A -2.9467
145 L A -1.2527
146 R A -3.3764
147 H A -3.4185
148 L A -2.4674
149 N A -3.4575
150 E A -4.1587
151 K A -4.0689
152 R A -3.9485
153 R A -3.1408
154 F A -0.5472
155 G A -1.0528
156 P A -1.0975
157 G A -1.4403
158 P A -0.9590
159 G A -1.0286
160 S A -1.1584
161 K A -1.6177
162 I A 0.2665
163 S A -0.9210
164 E A -1.7155
165 Y A 0.2927
166 R A -0.8119
167 H A -0.3964
168 Y A 1.2436
169 C A 1.3566
170 Y A 1.9558
171 S A 1.3522
172 L A 2.4582
173 Y A 2.1764
174 G A 0.4854
175 G A -0.3829
176 P A -0.8277
177 G A -0.8341
178 P A -0.5074
179 G A 0.5168
180 L A 2.0380
181 L A 2.1022
182 C A 0.7780
183 H A -1.1078
184 E A -2.1859
185 Q A -1.7391
186 L A -0.1694
187 S A -1.0724
188 D A -2.3506
189 S A -2.3184
190 E A -3.6484
191 E A -4.2735
192 E A -4.1084
193 N A -3.5577
194 D A -3.3523
195 G A -1.9009
196 P A -1.2153
197 G A -1.2283
198 P A -1.0852
199 G A -1.3837
200 Q A -1.7737
201 S A -1.0277
202 T A -0.7575
203 H A -0.6022
204 V A 0.6864
205 D A -0.7445
206 I A 0.7798
207 R A -1.2812
208 T A -0.7576
209 L A 0.5508
210 E A -1.2777
211 D A -1.0566
212 L A 1.4356
213 L A 1.9303
214 M A 1.2921
215 G A 0.4444
216 P A -0.4241
217 G A -0.7895
218 P A -0.7820
219 G A -0.8152
220 T A -0.5105
221 P A -0.1346
222 T A 0.3619
223 L A 0.6064
224 H A -0.8958
225 E A -1.1205
226 Y A 1.0520
227 M A 1.7661
228 L A 1.8749
229 D A -0.3080
230 L A 0.3126
231 Q A -1.3814
232 P A -1.4333
233 E A -2.1666
234 T A -1.2963
235 G A -1.1719
236 P A -0.7747
237 G A -0.7525
238 P A -0.5883
239 G A -0.4455
240 L A 0.4241
241 Q A -0.7519
242 D A -0.4067
243 I A 2.1855
244 V A 2.7942
245 L A 2.4635
246 H A 0.7244
247 L A 0.6003
248 E A -1.7126
249 P A -1.9858
250 Q A -2.4829
251 N A -2.5512
252 E A -1.9361
253 I A 0.4086
254 P A -0.2366
255 G A -0.5516
256 P A -0.6602
257 G A -0.9675
258 P A -0.8159
259 G A -0.7286
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Laboratory of Theory of Biopolymers 2018