| Chain sequence(s) |
A: PVSEKQLAEVVANTITPLMKAQSVPGMAVAVIYQGKPHYYTFGKKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARGEIISLDDDAVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQVPDEVTDNASLLRRFYQNWQPQWKPGTTRLYANASIGLFGALAVKPSGMPYEQAMTTRVLKPLKLDHTWINVPKAEEEAHYAWGYRDGKAVRVSPGMLDAQAYGVKTNVQDMANWVMANMAPENVADASLKQGIALAQSRYWRIGSMYQGLGWEMLNWPVVEANTVVEGSDSKVALAPLPVAEVNPPAPPVKKASWVHKTGSTGGFGSYVVAFIPEKQQIGIVMLANTSYPNPARVEAAYHILEAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:04)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:44)
[INFO] Main: Simulation completed successfully. (00:04:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | P | A | -0.4931 | |
| 3 | V | A | -0.6926 | |
| 4 | S | A | -1.8846 | |
| 5 | E | A | -3.1230 | |
| 6 | K | A | -3.2986 | |
| 7 | Q | A | -2.6538 | |
| 8 | L | A | 0.0000 | |
| 9 | A | A | -2.0599 | |
| 10 | E | A | -2.6353 | |
| 11 | V | A | -1.3901 | |
| 12 | V | A | 0.0000 | |
| 13 | A | A | -1.0261 | |
| 14 | N | A | -1.5876 | |
| 15 | T | A | -1.0673 | |
| 16 | I | A | 0.0000 | |
| 17 | T | A | -0.8474 | |
| 18 | P | A | -0.9792 | |
| 19 | L | A | -0.6953 | |
| 20 | M | A | -0.9005 | |
| 21 | K | A | -1.8131 | |
| 22 | A | A | -0.9639 | |
| 23 | Q | A | -0.9514 | |
| 24 | S | A | -0.9010 | |
| 25 | V | A | 0.0000 | |
| 26 | P | A | -0.5477 | |
| 27 | G | A | 0.0000 | |
| 28 | M | A | 0.0000 | |
| 29 | A | A | 0.0000 | |
| 30 | V | A | 0.0000 | |
| 31 | A | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | I | A | 0.0000 | |
| 34 | Y | A | -1.4491 | |
| 35 | Q | A | -2.2482 | |
| 36 | G | A | -2.0590 | |
| 37 | K | A | -2.3764 | |
| 38 | P | A | -1.2347 | |
| 39 | H | A | -0.6560 | |
| 40 | Y | A | 0.1746 | |
| 41 | Y | A | 0.4364 | |
| 42 | T | A | 0.0569 | |
| 43 | F | A | -0.1530 | |
| 44 | G | A | -1.0315 | |
| 45 | K | A | -1.5398 | |
| 46 | A | A | 0.0000 | |
| 47 | D | A | -0.7131 | |
| 48 | I | A | -0.0734 | |
| 49 | A | A | -0.1390 | |
| 50 | A | A | -0.7289 | |
| 51 | N | A | -1.6961 | |
| 52 | K | A | -1.7540 | |
| 53 | P | A | -1.4071 | |
| 54 | V | A | 0.0000 | |
| 55 | T | A | -0.7071 | |
| 56 | P | A | -0.6421 | |
| 57 | Q | A | -1.2855 | |
| 58 | T | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | F | A | 0.0000 | |
| 61 | E | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | G | A | 0.0000 | |
| 64 | S | A | -0.0234 | |
| 65 | I | A | 0.0000 | |
| 66 | S | A | 0.0000 | |
| 67 | K | A | 0.0000 | |
| 68 | T | A | 0.0000 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | L | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | D | A | 0.0000 | |
| 77 | A | A | 0.0000 | |
| 78 | I | A | -0.3705 | |
| 79 | A | A | -0.7963 | |
| 80 | R | A | -1.3716 | |
| 81 | G | A | -1.1064 | |
| 82 | E | A | -1.1457 | |
| 83 | I | A | 0.0000 | |
| 84 | S | A | -0.7762 | |
| 85 | L | A | -0.6959 | |
| 86 | D | A | -1.8547 | |
| 87 | D | A | 0.0000 | |
| 88 | A | A | -1.4587 | |
| 89 | V | A | 0.0000 | |
| 90 | T | A | -1.5445 | |
| 91 | R | A | -2.0364 | |
| 92 | Y | A | -1.2543 | |
| 93 | W | A | 0.0000 | |
| 94 | P | A | -1.3454 | |
| 95 | Q | A | -1.5456 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | -1.2515 | |
| 98 | G | A | -1.8493 | |
| 99 | K | A | -2.3388 | |
| 100 | Q | A | -2.1879 | |
| 101 | W | A | 0.0000 | |
| 102 | Q | A | -2.1288 | |
| 103 | G | A | -1.8343 | |
| 104 | I | A | 0.0000 | |
| 105 | R | A | -1.4335 | |
| 106 | M | A | 0.0000 | |
| 107 | L | A | -0.4047 | |
| 108 | D | A | 0.0000 | |
| 109 | L | A | 0.0000 | |
| 110 | A | A | 0.0000 | |
| 111 | T | A | 0.0000 | |
| 112 | Y | A | 0.0000 | |
| 113 | T | A | 0.0000 | |
| 114 | A | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | G | A | -0.7540 | |
| 117 | L | A | 0.0000 | |
| 118 | P | A | -0.2338 | |
| 119 | L | A | -0.0410 | |
| 120 | Q | A | -1.2249 | |
| 121 | V | A | -1.0835 | |
| 122 | P | A | -1.7412 | |
| 123 | D | A | -2.8760 | |
| 124 | E | A | -2.8176 | |
| 125 | V | A | 0.0000 | |
| 126 | T | A | -1.8911 | |
| 127 | D | A | -2.4635 | |
| 128 | N | A | -2.1400 | |
| 129 | A | A | -1.4458 | |
| 130 | S | A | -1.7800 | |
| 131 | L | A | 0.0000 | |
| 132 | L | A | -1.5670 | |
| 133 | R | A | -2.3816 | |
| 134 | F | A | -1.4978 | |
| 135 | Y | A | 0.0000 | |
| 136 | Q | A | -2.0511 | |
| 137 | N | A | -2.1556 | |
| 138 | W | A | 0.0000 | |
| 139 | Q | A | -1.8762 | |
| 140 | P | A | -1.6911 | |
| 141 | Q | A | -1.7592 | |
| 142 | W | A | -1.3805 | |
| 143 | K | A | -1.9896 | |
| 144 | P | A | -1.3587 | |
| 145 | G | A | -0.9413 | |
| 146 | T | A | -0.7297 | |
| 147 | T | A | -0.3800 | |
| 148 | R | A | 0.0000 | |
| 149 | L | A | 0.4894 | |
| 150 | Y | A | 0.4695 | |
| 151 | A | A | 0.0000 | |
| 152 | N | A | 0.0000 | |
| 153 | A | A | 0.0000 | |
| 154 | S | A | 0.0000 | |
| 155 | I | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | L | A | 0.0000 | |
| 158 | F | A | 0.0000 | |
| 159 | G | A | 0.0000 | |
| 160 | A | A | -0.2803 | |
| 161 | L | A | 0.0000 | |
| 162 | A | A | 0.0000 | |
| 163 | V | A | 0.0000 | |
| 164 | K | A | -1.4959 | |
| 165 | P | A | -1.0380 | |
| 166 | S | A | -0.9833 | |
| 167 | G | A | -0.9792 | |
| 168 | M | A | -0.9019 | |
| 169 | P | A | -1.1546 | |
| 170 | Y | A | 0.0000 | |
| 171 | E | A | -1.9302 | |
| 172 | Q | A | -1.6023 | |
| 173 | A | A | 0.0000 | |
| 174 | M | A | 0.0000 | |
| 175 | T | A | -1.5817 | |
| 176 | T | A | -1.0623 | |
| 177 | R | A | -0.8633 | |
| 178 | V | A | 0.0000 | |
| 179 | L | A | 0.0000 | |
| 180 | K | A | -2.9088 | |
| 181 | P | A | -1.8831 | |
| 182 | L | A | 0.0000 | |
| 183 | K | A | -3.1252 | |
| 184 | L | A | 0.0000 | |
| 185 | D | A | -3.0421 | |
| 186 | H | A | -1.9975 | |
| 187 | T | A | 0.0000 | |
| 188 | W | A | -0.6416 | |
| 189 | I | A | 0.0000 | |
| 190 | N | A | -1.4116 | |
| 191 | V | A | -0.9049 | |
| 192 | P | A | -1.2862 | |
| 193 | K | A | -2.0632 | |
| 194 | A | A | -1.0776 | |
| 195 | E | A | -1.2036 | |
| 196 | E | A | -1.3239 | |
| 197 | A | A | -0.9213 | |
| 198 | H | A | -0.8228 | |
| 199 | Y | A | -0.3421 | |
| 200 | A | A | 0.0000 | |
| 201 | W | A | -0.0031 | |
| 202 | G | A | 0.0000 | |
| 203 | Y | A | -1.7295 | |
| 204 | R | A | -3.4117 | |
| 205 | D | A | -3.4050 | |
| 206 | G | A | -2.6802 | |
| 207 | K | A | -2.9366 | |
| 208 | A | A | -1.2743 | |
| 209 | V | A | -0.7440 | |
| 210 | R | A | -0.2260 | |
| 211 | V | A | 0.0069 | |
| 212 | S | A | -0.3678 | |
| 213 | P | A | -0.6528 | |
| 214 | G | A | -0.9607 | |
| 215 | M | A | -1.0909 | |
| 216 | L | A | 0.0000 | |
| 217 | D | A | -0.4156 | |
| 218 | A | A | 0.0000 | |
| 219 | Q | A | -0.3327 | |
| 220 | A | A | 0.0000 | |
| 221 | Y | A | 0.0701 | |
| 222 | G | A | 0.0000 | |
| 223 | V | A | 0.0000 | |
| 224 | K | A | 0.0000 | |
| 225 | T | A | 0.0000 | |
| 226 | N | A | 0.0000 | |
| 227 | V | A | 0.0000 | |
| 228 | Q | A | -1.2636 | |
| 229 | D | A | -1.5350 | |
| 230 | M | A | 0.0000 | |
| 231 | A | A | 0.0000 | |
| 232 | N | A | -0.9898 | |
| 233 | W | A | 0.0000 | |
| 234 | V | A | 0.0000 | |
| 235 | M | A | -0.6412 | |
| 236 | A | A | 0.0000 | |
| 237 | N | A | 0.0000 | |
| 238 | M | A | 0.0000 | |
| 239 | A | A | -1.4826 | |
| 240 | P | A | -1.6044 | |
| 241 | E | A | -2.7490 | |
| 242 | N | A | -2.3342 | |
| 243 | V | A | 0.0000 | |
| 244 | A | A | -1.1675 | |
| 245 | D | A | -1.5309 | |
| 246 | A | A | -1.1207 | |
| 247 | S | A | -1.0078 | |
| 248 | L | A | 0.0000 | |
| 249 | K | A | -1.7233 | |
| 250 | Q | A | -1.3819 | |
| 251 | G | A | 0.0000 | |
| 252 | I | A | 0.0000 | |
| 253 | A | A | -0.4822 | |
| 254 | L | A | -0.0448 | |
| 255 | A | A | 0.0000 | |
| 256 | Q | A | 0.0000 | |
| 257 | S | A | 0.0000 | |
| 258 | R | A | 0.0000 | |
| 259 | Y | A | 0.0000 | |
| 260 | W | A | 0.0000 | |
| 261 | R | A | -1.6558 | |
| 262 | I | A | 0.0000 | |
| 263 | G | A | -0.7979 | |
| 264 | S | A | -0.7443 | |
| 265 | M | A | -0.5737 | |
| 266 | Y | A | 0.0000 | |
| 267 | Q | A | 0.0000 | |
| 268 | G | A | 0.0000 | |
| 269 | L | A | 0.0000 | |
| 270 | G | A | 0.0000 | |
| 271 | W | A | 0.0000 | |
| 272 | E | A | 0.0000 | |
| 273 | M | A | 0.0000 | |
| 274 | L | A | 0.0000 | |
| 275 | N | A | -0.7490 | |
| 276 | W | A | -0.8219 | |
| 277 | P | A | -0.6130 | |
| 278 | V | A | -1.0842 | |
| 279 | E | A | -2.0945 | |
| 280 | A | A | -2.2309 | |
| 281 | N | A | -2.4007 | |
| 282 | T | A | -1.6366 | |
| 283 | V | A | 0.0000 | |
| 284 | V | A | -1.7435 | |
| 285 | E | A | -2.3089 | |
| 286 | G | A | -1.2176 | |
| 287 | S | A | 0.0000 | |
| 288 | D | A | -1.2626 | |
| 289 | S | A | -0.9477 | |
| 290 | K | A | -1.5405 | |
| 291 | V | A | -0.3054 | |
| 292 | A | A | -0.0076 | |
| 293 | L | A | 0.7857 | |
| 294 | A | A | 0.3094 | |
| 295 | P | A | 0.2217 | |
| 296 | L | A | 0.3953 | |
| 297 | P | A | -0.2436 | |
| 298 | V | A | -0.6989 | |
| 299 | A | A | -1.3765 | |
| 300 | E | A | -2.3506 | |
| 301 | V | A | -1.5993 | |
| 302 | N | A | -1.8668 | |
| 303 | P | A | -1.3075 | |
| 304 | P | A | -0.9766 | |
| 305 | A | A | -0.3091 | |
| 306 | P | A | -0.3279 | |
| 307 | P | A | -0.2846 | |
| 308 | V | A | -0.5049 | |
| 309 | K | A | -2.2332 | |
| 310 | A | A | -1.3840 | |
| 311 | S | A | 0.0000 | |
| 312 | W | A | 0.0000 | |
| 313 | V | A | 0.0000 | |
| 314 | H | A | -0.1083 | |
| 315 | K | A | 0.0000 | |
| 316 | T | A | -0.1152 | |
| 317 | G | A | 0.0000 | |
| 318 | S | A | -0.2492 | |
| 319 | T | A | -0.3966 | |
| 320 | G | A | -0.8298 | |
| 321 | G | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | G | A | 0.0000 | |
| 324 | S | A | 0.0000 | |
| 325 | Y | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | A | A | 0.0000 | |
| 328 | F | A | 0.0000 | |
| 329 | I | A | 0.0000 | |
| 330 | P | A | -1.7955 | |
| 331 | E | A | -2.5844 | |
| 332 | K | A | -2.3694 | |
| 333 | Q | A | -2.5387 | |
| 334 | I | A | 0.0000 | |
| 335 | G | A | 0.0000 | |
| 336 | I | A | 0.0000 | |
| 337 | V | A | 0.0000 | |
| 338 | M | A | 0.0000 | |
| 339 | L | A | 0.0000 | |
| 340 | A | A | 0.0000 | |
| 341 | N | A | 0.0000 | |
| 342 | T | A | -0.8144 | |
| 343 | S | A | -0.7048 | |
| 344 | Y | A | 0.0000 | |
| 345 | P | A | -0.5521 | |
| 346 | N | A | -0.8816 | |
| 347 | P | A | -1.1688 | |
| 348 | A | A | -0.6063 | |
| 349 | R | A | 0.0000 | |
| 350 | V | A | 0.0000 | |
| 351 | E | A | -1.7851 | |
| 352 | A | A | 0.0000 | |
| 353 | A | A | 0.0000 | |
| 354 | Y | A | -1.4416 | |
| 355 | H | A | -1.8292 | |
| 356 | I | A | 0.0000 | |
| 357 | L | A | 0.0000 | |
| 358 | E | A | -2.0392 | |
| 359 | A | A | -0.9068 | |
| 360 | L | A | -0.6721 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine