| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPVHGGEDDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRNGPDGTPLPAAPPPSPLYVPPPPGSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9481 | |
| 2 | L | A | 1.9710 | |
| 3 | P | A | 0.6540 | |
| 4 | P | A | 0.3641 | |
| 5 | T | A | 0.1213 | |
| 6 | T | A | 0.1366 | |
| 7 | P | A | 0.1832 | |
| 8 | V | A | 1.2105 | |
| 9 | A | A | 0.0405 | |
| 10 | K | A | -1.1318 | |
| 11 | V | A | -0.3721 | |
| 12 | Q | A | -1.4553 | |
| 13 | S | A | -1.5626 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3701 | |
| 16 | E | A | -2.4062 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4614 | |
| 20 | P | A | 0.1114 | |
| 21 | T | A | 0.1116 | |
| 22 | S | A | -0.1704 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1086 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3075 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8963 | |
| 31 | R | A | -2.6785 | |
| 32 | L | A | -0.8110 | |
| 33 | L | A | 1.1919 | |
| 34 | T | A | 1.4424 | |
| 35 | V | A | 1.9823 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2105 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6221 | |
| 40 | K | A | -1.6117 | |
| 41 | D | A | -0.9324 | |
| 42 | I | A | 0.7269 | |
| 43 | V | A | 0.9186 | |
| 44 | K | A | -1.2753 | |
| 45 | N | A | -1.9691 | |
| 46 | G | A | -1.2829 | |
| 47 | K | A | -1.0220 | |
| 48 | V | A | 1.3611 | |
| 49 | V | A | 1.7755 | |
| 50 | V | A | 1.1868 | |
| 51 | P | A | 0.4396 | |
| 52 | K | A | -0.6306 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1786 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4068 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3164 | |
| 70 | K | A | -1.8319 | |
| 71 | F | A | -0.8691 | |
| 72 | A | A | -0.5820 | |
| 73 | L | A | -0.9342 | |
| 74 | P | A | -1.2577 | |
| 75 | Q | A | -2.4647 | |
| 76 | K | A | -3.0840 | |
| 77 | D | A | -2.9795 | |
| 78 | F | A | -1.6248 | |
| 79 | Y | A | -1.9053 | |
| 80 | D | A | -2.7271 | |
| 81 | P | A | -2.3350 | |
| 82 | E | A | -3.0529 | |
| 83 | K | A | -3.4238 | |
| 84 | E | A | -2.4802 | |
| 85 | R | A | -1.2975 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6215 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9882 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3534 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6958 | |
| 99 | G | A | -0.5515 | |
| 100 | P | A | -0.4367 | |
| 101 | L | A | -0.0290 | |
| 102 | G | A | -0.2357 | |
| 103 | K | A | -0.6581 | |
| 104 | G | A | -0.5472 | |
| 105 | S | A | -0.5732 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1254 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4001 | |
| 110 | L | A | 0.2328 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2297 | |
| 113 | K | A | -0.5957 | |
| 114 | L | A | -1.1065 | |
| 115 | G | A | -0.9400 | |
| 116 | D | A | -1.4232 | |
| 117 | T | A | -1.2179 | |
| 118 | E | A | -2.6984 | |
| 119 | N | A | -2.4042 | |
| 120 | P | A | -1.5577 | |
| 121 | T | A | -0.7549 | |
| 122 | A | A | -0.3841 | |
| 123 | P | A | 0.2257 | |
| 124 | V | A | -0.0469 | |
| 125 | H | A | -0.5433 | |
| 126 | G | A | -1.9204 | |
| 127 | G | A | -2.5075 | |
| 128 | E | A | -3.2725 | |
| 129 | D | A | -3.2898 | |
| 130 | D | A | -2.4427 | |
| 131 | R | A | -1.4611 | |
| 132 | V | A | 0.1762 | |
| 133 | A | A | 0.4338 | |
| 134 | F | A | 0.3000 | |
| 135 | S | A | -0.0892 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7612 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5540 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2814 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1003 | |
| 157 | D | A | 0.5283 | |
| 158 | I | A | 1.2637 | |
| 159 | A | A | 1.0157 | |
| 160 | A | A | 0.3635 | |
| 161 | P | A | 0.5982 | |
| 162 | C | A | 0.5838 | |
| 163 | P | A | 0.0582 | |
| 164 | G | A | -0.0680 | |
| 165 | L | A | 0.6109 | |
| 166 | P | A | -0.0943 | |
| 167 | P | A | -0.3316 | |
| 168 | G | A | -0.4171 | |
| 169 | A | A | 0.0892 | |
| 170 | C | A | 0.8636 | |
| 171 | P | A | 0.8174 | |
| 172 | P | A | 1.1567 | |
| 173 | I | A | 2.3167 | |
| 174 | Q | A | 1.1177 | |
| 175 | L | A | 1.4453 | |
| 176 | V | A | 0.8108 | |
| 177 | N | A | -0.3544 | |
| 178 | S | A | -0.0233 | |
| 179 | V | A | 0.3571 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3572 | |
| 182 | D | A | 0.0535 | |
| 183 | G | A | -0.1623 | |
| 184 | D | A | -0.6147 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4935 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1042 | |
| 190 | F | A | 0.0146 | |
| 191 | G | A | -0.1616 | |
| 192 | N | A | -0.3661 | |
| 193 | M | A | -0.2242 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4291 | |
| 197 | E | A | -2.6432 | |
| 198 | L | A | -1.2377 | |
| 199 | Q | A | -2.5373 | |
| 200 | Q | A | -3.3399 | |
| 201 | D | A | -3.6045 | |
| 202 | R | A | -3.3479 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1813 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3948 | |
| 211 | S | A | -1.9459 | |
| 212 | T | A | -1.5401 | |
| 213 | R | A | -2.2994 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2299 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2557 | |
| 220 | L | A | 0.4465 | |
| 221 | K | A | -1.4176 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -1.0017 | |
| 224 | N | A | -1.7375 | |
| 225 | E | A | -1.3619 | |
| 226 | A | A | -0.6795 | |
| 227 | Y | A | -0.4681 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7219 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1356 | |
| 234 | F | A | 0.0422 | |
| 235 | G | A | -0.9168 | |
| 236 | R | A | -2.6690 | |
| 237 | R | A | -2.9417 | |
| 238 | E | A | -2.1190 | |
| 239 | Q | A | -0.1342 | |
| 240 | V | A | 1.5395 | |
| 241 | Y | A | 1.2404 | |
| 242 | A | A | 0.1625 | |
| 243 | R | A | -1.3444 | |
| 244 | H | A | -1.2082 | |
| 245 | F | A | -0.2540 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8080 | |
| 249 | N | A | -1.6279 | |
| 250 | G | A | -1.4693 | |
| 251 | P | A | -0.9352 | |
| 252 | D | A | -1.0056 | |
| 253 | G | A | -0.8191 | |
| 254 | T | A | -0.4615 | |
| 255 | P | A | -0.2565 | |
| 256 | L | A | 0.5902 | |
| 257 | P | A | 0.1905 | |
| 258 | A | A | 0.0557 | |
| 259 | A | A | 0.2044 | |
| 260 | P | A | -0.2367 | |
| 261 | P | A | 0.0075 | |
| 262 | P | A | 0.0650 | |
| 263 | S | A | 0.6461 | |
| 264 | P | A | 0.7173 | |
| 265 | L | A | 1.8923 | |
| 266 | Y | A | 1.7745 | |
| 267 | V | A | 1.9409 | |
| 268 | P | A | 1.0104 | |
| 269 | P | A | 0.6677 | |
| 270 | P | A | -0.1967 | |
| 271 | P | A | -0.5155 | |
| 272 | G | A | -0.3541 | |
| 273 | S | A | 0.1133 | |
| 274 | P | A | 0.4781 | |
| 275 | Y | A | 1.5319 | |
| 276 | A | A | 1.2856 | |
| 277 | V | A | 2.2722 | |
| 278 | L | A | 1.7892 | |
| 279 | P | A | 0.4915 | |
| 280 | P | A | -0.0308 | |
| 281 | Y | A | 0.1108 | |
| 282 | D | A | -0.5400 | |
| 283 | Y | A | 0.9714 | |
| 284 | F | A | 0.7845 | |
| 285 | G | A | 0.1268 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9525 | |
| 291 | L | A | 1.6543 | |
| 292 | V | A | 0.6498 | |
| 293 | S | A | -0.1760 | |
| 294 | S | A | -1.0041 | |
| 295 | D | A | -1.8755 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0639 | |
| 298 | L | A | -1.2040 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6634 | |
| 301 | R | A | -1.9275 | |
| 302 | P | A | -0.9797 | |
| 303 | F | A | -0.1771 | |
| 304 | W | A | -0.5131 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0748 | |
| 307 | R | A | -2.9203 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7863 | |
| 310 | G | A | -1.4295 | |
| 311 | N | A | -1.3795 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9842 | |
| 319 | N | A | -0.9189 | |
| 320 | E | A | -1.0691 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3587 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1660 | |
| 333 | N | A | 0.4265 | |
| 334 | F | A | 1.4775 | |
| 335 | T | A | 0.7447 | |
| 336 | I | A | 0.3464 | |
| 337 | S | A | -0.9862 | |
| 338 | Q | A | -1.4648 | |
| 339 | Q | A | -0.6889 | |
| 340 | L | A | 0.7264 | |
| 341 | S | A | 0.5849 | |
| 342 | T | A | 0.4089 | |
| 343 | P | A | 0.3523 | |
| 344 | L | A | 1.4174 | |
| 345 | P | A | 0.7389 | |
| 346 | N | A | 0.0967 | |
| 347 | V | A | 1.7207 | |
| 348 | Y | A | 1.5494 | |
| 349 | D | A | -0.1357 | |
| 350 | P | A | -0.5465 | |
| 351 | S | A | -0.5373 | |
| 352 | N | A | -0.0674 | |
| 353 | F | A | -0.7671 | |
| 354 | K | A | -1.9837 | |
| 355 | N | A | -1.8059 | |
| 356 | Y | A | -0.1525 | |
| 357 | L | A | 0.5746 | |
| 358 | R | A | 0.9235 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4488 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0390 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0175 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6859 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3181 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3241 | |
| 376 | L | A | -1.7510 | |
| 377 | D | A | -2.0466 | |
| 378 | P | A | -1.0700 | |
| 379 | G | A | -1.0224 | |
| 380 | V | A | -0.9301 | |
| 381 | L | A | -0.5485 | |
| 382 | A | A | -0.6664 | |
| 383 | H | A | -0.8442 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4112 | |
| 386 | T | A | -0.5761 | |
| 387 | M | A | -0.3869 | |
| 388 | N | A | -0.8688 | |
| 389 | P | A | -1.3057 | |
| 390 | T | A | -1.6036 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5522 | |
| 393 | E | A | -3.1514 | |
| 394 | N | A | -2.7634 | |
| 395 | W | A | -1.5149 | |
| 396 | N | A | -1.2014 | |
| 397 | L | A | -0.1706 | |
| 398 | G | A | 0.5850 | |
| 399 | F | A | 2.4592 | |
| 400 | V | A | 2.0732 | |
| 401 | P | A | 0.0956 | |
| 402 | P | A | -1.8839 | |
| 403 | K | A | -3.5959 | |
| 404 | E | A | -4.0144 | |
| 405 | R | A | -4.4835 | |
| 406 | E | A | -4.0350 | |
| 407 | D | A | -3.0000 | |
| 408 | P | A | -1.8312 | |
| 409 | Y | A | -0.9942 | |
| 410 | K | A | -2.1072 | |
| 411 | G | A | -0.6413 | |
| 412 | L | A | 0.6520 | |
| 413 | I | A | 1.5643 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4146 | |
| 416 | E | A | -1.7034 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9533 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0856 | |
| 421 | E | A | -2.7635 | |
| 422 | R | A | -2.5877 | |
| 423 | F | A | -1.3120 | |
| 424 | S | A | -1.4895 | |
| 425 | Q | A | -1.7875 | |
| 426 | D | A | -2.9197 | |
| 427 | L | A | -2.0196 | |
| 428 | D | A | -2.8082 | |
| 429 | Q | A | -2.6306 | |
| 430 | F | A | -1.4500 | |
| 431 | A | A | -0.9159 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6127 | |
| 435 | K | A | -0.7607 | |
| 436 | F | A | 0.1491 | |
| 437 | L | A | 1.0280 | |
| 438 | Y | A | 0.8184 | |
| 439 | Q | A | -0.2769 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine