| Chain sequence(s) |
A: GCAGKACNLLGLTCDAGCFCRPDGVGIVAGVCV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2697 | |
| 2 | C | A | -0.2625 | |
| 3 | A | A | -0.6935 | |
| 4 | G | A | -1.3044 | |
| 5 | K | A | -1.7400 | |
| 6 | A | A | -1.1550 | |
| 7 | C | A | 0.0000 | |
| 8 | N | A | 0.1787 | |
| 9 | L | A | 1.5924 | |
| 10 | L | A | 1.9434 | |
| 11 | G | A | 0.9851 | |
| 12 | L | A | 1.6624 | |
| 13 | T | A | 0.6103 | |
| 14 | C | A | -0.1946 | |
| 15 | D | A | -1.2659 | |
| 16 | A | A | -0.4744 | |
| 17 | G | A | -0.2004 | |
| 18 | C | A | 0.5828 | |
| 19 | F | A | 1.9377 | |
| 20 | C | A | 0.0000 | |
| 21 | R | A | -0.2952 | |
| 22 | P | A | 0.0149 | |
| 23 | D | A | -1.2532 | |
| 24 | G | A | -0.0158 | |
| 25 | V | A | 1.5881 | |
| 26 | G | A | 0.9515 | |
| 27 | I | A | 1.4163 | |
| 28 | V | A | 2.0357 | |
| 29 | A | A | 0.4011 | |
| 30 | G | A | -0.6865 | |
| 31 | V | A | -0.3725 | |
| 32 | C | A | 0.0000 | |
| 33 | V | A | 0.8348 |