| Chain sequence(s) |
A: VLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | ID107A,RL31A,KL16A,LG69A,LG76A,TR67A,GR73A,LD135A,VG114A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 18.0836 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:22)
[INFO] FoldX: Starting FoldX energy minimalization (00:08:57)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:11:43)
[INFO] Main: Simulation completed successfully. (00:11:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.2305 | |
| 2 | L | A | 0.0000 | |
| 3 | S | A | -1.0504 | |
| 4 | E | A | -2.3404 | |
| 5 | G | A | -1.8056 | |
| 6 | E | A | -1.7893 | |
| 7 | W | A | -1.7950 | |
| 8 | Q | A | -1.9134 | |
| 9 | L | A | -1.1922 | |
| 10 | V | A | 0.0000 | |
| 11 | L | A | -0.8711 | |
| 12 | H | A | -0.8467 | |
| 13 | V | A | 0.0000 | |
| 14 | W | A | 0.0000 | |
| 15 | A | A | -0.4069 | |
| 16 | L | A | -0.5302 | mutated: KL16A |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -0.9571 | |
| 19 | A | A | -0.8515 | |
| 20 | D | A | -1.5590 | |
| 21 | V | A | -0.9106 | |
| 22 | A | A | -0.9980 | |
| 23 | G | A | -0.8368 | |
| 24 | H | A | 0.0000 | |
| 25 | G | A | 0.0000 | |
| 26 | Q | A | 0.0000 | |
| 27 | D | A | -0.5044 | |
| 28 | I | A | -0.2821 | |
| 29 | L | A | 0.0000 | |
| 30 | I | A | 0.0000 | |
| 31 | L | A | -0.7736 | mutated: RL31A |
| 32 | L | A | 0.0000 | |
| 33 | F | A | 0.0000 | |
| 34 | K | A | -2.2580 | |
| 35 | S | A | -1.2954 | |
| 36 | H | A | -1.2127 | |
| 37 | P | A | -1.6783 | |
| 38 | E | A | -1.8834 | |
| 39 | T | A | 0.0000 | |
| 40 | L | A | -2.6499 | |
| 41 | E | A | -3.4756 | |
| 42 | K | A | -2.8717 | |
| 43 | F | A | -2.5689 | |
| 44 | D | A | -3.4305 | |
| 45 | R | A | -2.9448 | |
| 46 | F | A | 0.0000 | |
| 47 | K | A | -3.8577 | |
| 48 | H | A | -3.0299 | |
| 49 | L | A | 0.0000 | |
| 50 | K | A | -2.9315 | |
| 51 | T | A | -2.3398 | |
| 52 | E | A | -2.5812 | |
| 53 | A | A | -1.7432 | |
| 54 | E | A | -2.2983 | |
| 55 | M | A | 0.0000 | |
| 56 | K | A | -2.3462 | |
| 57 | A | A | -1.7381 | |
| 58 | S | A | -2.0850 | |
| 59 | E | A | -2.9990 | |
| 60 | D | A | -2.5283 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.6463 | |
| 63 | K | A | -2.5836 | |
| 64 | H | A | -1.8117 | |
| 65 | G | A | 0.0000 | |
| 66 | V | A | -0.9620 | |
| 67 | R | A | -1.6893 | mutated: TR67A |
| 68 | V | A | -0.3552 | |
| 69 | G | A | -0.2979 | mutated: LG69A |
| 70 | T | A | -0.5486 | |
| 71 | A | A | -0.3799 | |
| 72 | L | A | -0.4288 | |
| 73 | R | A | -1.1291 | mutated: GR73A |
| 74 | A | A | -1.1027 | |
| 75 | I | A | 0.0000 | |
| 76 | G | A | -1.5921 | mutated: LG76A |
| 77 | K | A | -2.3046 | |
| 78 | K | A | -2.6909 | |
| 79 | K | A | -2.3059 | |
| 80 | G | A | -1.4525 | |
| 81 | H | A | -2.3596 | |
| 82 | H | A | 0.0000 | |
| 83 | E | A | -2.6647 | |
| 84 | A | A | -1.5719 | |
| 85 | E | A | -1.4660 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -1.8827 | |
| 88 | P | A | -1.2133 | |
| 89 | L | A | -0.5913 | |
| 90 | A | A | 0.0000 | |
| 91 | Q | A | -1.3990 | |
| 92 | S | A | -1.6279 | |
| 93 | H | A | -1.5583 | |
| 94 | A | A | 0.0000 | |
| 95 | T | A | -1.5473 | |
| 96 | K | A | -2.6743 | |
| 97 | H | A | -2.5063 | |
| 98 | K | A | -2.3321 | |
| 99 | I | A | -1.3397 | |
| 100 | P | A | -1.1170 | |
| 101 | I | A | -1.3190 | |
| 102 | K | A | -2.0274 | |
| 103 | Y | A | -1.2136 | |
| 104 | L | A | -1.3193 | |
| 105 | E | A | -2.4090 | |
| 106 | F | A | -1.2376 | |
| 107 | D | A | -1.1419 | mutated: ID107A |
| 108 | S | A | 0.0000 | |
| 109 | E | A | -2.0889 | |
| 110 | A | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | I | A | -1.1903 | |
| 113 | H | A | -1.7011 | |
| 114 | G | A | -1.4184 | mutated: VG114A |
| 115 | L | A | 0.0000 | |
| 116 | H | A | -2.2024 | |
| 117 | S | A | -1.8502 | |
| 118 | R | A | -2.5591 | |
| 119 | H | A | -1.8147 | |
| 120 | P | A | -1.5971 | |
| 121 | G | A | -1.3145 | |
| 122 | D | A | -1.5653 | |
| 123 | F | A | 0.0000 | |
| 124 | G | A | -1.3902 | |
| 125 | A | A | -1.3389 | |
| 126 | D | A | -2.0954 | |
| 127 | A | A | 0.0000 | |
| 128 | Q | A | -1.6454 | |
| 129 | G | A | -1.4019 | |
| 130 | A | A | 0.0000 | |
| 131 | M | A | 0.0000 | |
| 132 | N | A | -2.0268 | |
| 133 | K | A | -1.8375 | |
| 134 | A | A | -1.3700 | |
| 135 | D | A | 0.0000 | mutated: LD135A |
| 136 | E | A | -2.9545 | |
| 137 | L | A | -1.4664 | |
| 138 | F | A | -1.1911 | |
| 139 | R | A | -2.1041 | |
| 140 | K | A | -2.2703 | |
| 141 | D | A | -1.7306 | |
| 142 | I | A | 0.0000 | |
| 143 | A | A | -1.6503 | |
| 144 | A | A | -1.6569 | |
| 145 | K | A | -1.9691 | |
| 146 | Y | A | 0.0000 | |
| 147 | K | A | -2.8036 | |
| 148 | E | A | -2.5714 | |
| 149 | L | A | -1.0997 | |
| 150 | G | A | -1.3484 | |
| 151 | Y | A | -1.1422 | |
| 152 | Q | A | -1.8226 | |
| 153 | G | A | -1.3277 |