| Chain sequence(s) |
H: EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSAITWNSGHIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKVSYLSTASSLDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQGIRNYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQRYNRAPYTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1323 | |
| 2 | V | H | -1.1704 | |
| 3 | Q | H | -1.2323 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0366 | |
| 6 | E | H | 0.4013 | |
| 7 | S | H | -0.1423 | |
| 8 | G | H | -0.4120 | |
| 9 | G | H | 0.1962 | |
| 10 | G | H | 0.8463 | |
| 11 | L | H | 1.5233 | |
| 12 | V | H | -0.0856 | |
| 13 | Q | H | -1.1572 | |
| 14 | P | H | -1.7161 | |
| 15 | G | H | -1.9973 | |
| 16 | R | H | -2.5595 | |
| 17 | S | H | -1.6210 | |
| 18 | L | H | -0.8297 | |
| 19 | R | H | -1.1291 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.1920 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.1650 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.0794 | |
| 26 | G | H | -1.2720 | |
| 27 | F | H | -0.8260 | |
| 28 | T | H | -0.8133 | |
| 29 | F | H | 0.0000 | |
| 30 | D | H | -2.1201 | |
| 31 | D | H | -0.8882 | |
| 32 | Y | H | 0.2215 | |
| 33 | A | H | 0.0000 | |
| 34 | M | H | 0.0000 | |
| 35 | H | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.7004 | |
| 40 | A | H | -1.0801 | |
| 41 | P | H | -0.8473 | |
| 42 | G | H | -1.4773 | |
| 43 | K | H | -2.3613 | |
| 44 | G | H | -1.6212 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -1.0240 | |
| 47 | W | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | S | H | 0.0000 | |
| 50 | A | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | T | H | 0.0000 | |
| 53 | W | H | -0.8903 | |
| 54 | N | H | -1.9282 | |
| 55 | S | H | -1.1482 | |
| 56 | G | H | -1.0940 | |
| 57 | H | H | -0.9242 | |
| 58 | I | H | 0.3946 | |
| 59 | D | H | -0.4942 | |
| 60 | Y | H | -0.7596 | |
| 61 | A | H | 0.0000 | |
| 62 | D | H | -2.6336 | |
| 63 | S | H | -1.7106 | |
| 64 | V | H | 0.0000 | |
| 65 | E | H | -2.6558 | |
| 66 | G | H | -1.7493 | |
| 67 | R | H | -1.3017 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.5875 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.1221 | |
| 72 | R | H | -1.0923 | |
| 73 | D | H | -1.6233 | |
| 74 | N | H | -2.0891 | |
| 75 | A | H | -1.4875 | |
| 76 | K | H | -2.4477 | |
| 77 | N | H | -2.0887 | |
| 78 | S | H | -1.1666 | |
| 79 | L | H | 0.0000 | |
| 80 | Y | H | -0.2754 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -0.7193 | |
| 83 | M | H | 0.0000 | |
| 84 | N | H | -1.5836 | |
| 85 | S | H | -1.6331 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.0539 | |
| 88 | A | H | -1.4432 | |
| 89 | E | H | -2.1185 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.3430 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | 0.5225 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | K | H | 0.0000 | |
| 99 | V | H | 0.0000 | |
| 100 | S | H | 1.0596 | |
| 101 | Y | H | 1.9129 | |
| 102 | L | H | 1.9221 | |
| 103 | S | H | 0.8347 | |
| 104 | T | H | 0.1053 | |
| 105 | A | H | -0.2431 | |
| 106 | S | H | 0.2906 | |
| 107 | S | H | 0.0000 | |
| 108 | L | H | 0.0000 | |
| 109 | D | H | 0.1615 | |
| 110 | Y | H | 0.3384 | |
| 111 | W | H | 0.0000 | |
| 112 | G | H | 0.0000 | |
| 113 | Q | H | -1.1933 | |
| 114 | G | H | -0.3605 | |
| 115 | T | H | 0.4456 | |
| 116 | L | H | 1.3812 | |
| 117 | V | H | 0.0000 | |
| 118 | T | H | 0.4565 | |
| 119 | V | H | 0.0000 | |
| 120 | S | H | -0.4075 | |
| 121 | S | H | -0.3160 | |
| 122 | D | L | -2.4938 | |
| 123 | I | L | 0.0000 | |
| 124 | Q | L | -2.3362 | |
| 125 | M | L | 0.0000 | |
| 126 | T | L | -1.4600 | |
| 127 | Q | L | 0.0000 | |
| 128 | S | L | -0.7395 | |
| 129 | P | L | -0.5508 | |
| 130 | S | L | -0.9421 | |
| 131 | S | L | -1.1597 | |
| 132 | L | L | -0.9113 | |
| 133 | S | L | -1.0969 | |
| 134 | A | L | -1.0794 | |
| 135 | S | L | -0.8257 | |
| 136 | V | L | 0.0971 | |
| 137 | G | L | -0.6832 | |
| 138 | D | L | -1.7453 | |
| 139 | R | L | -2.3061 | |
| 140 | V | L | 0.0000 | |
| 141 | T | L | -0.6494 | |
| 142 | I | L | 0.0000 | |
| 143 | T | L | -0.8171 | |
| 144 | C | L | 0.0000 | |
| 145 | R | L | -2.8461 | |
| 146 | A | L | 0.0000 | |
| 147 | S | L | -2.1291 | |
| 148 | Q | L | -2.5900 | |
| 149 | G | L | -2.1503 | |
| 150 | I | L | 0.0000 | |
| 151 | R | L | -2.6284 | |
| 152 | N | L | -1.6804 | |
| 153 | Y | L | -0.9104 | |
| 154 | L | L | 0.0000 | |
| 155 | A | L | 0.0000 | |
| 156 | W | L | 0.0000 | |
| 157 | Y | L | 0.0000 | |
| 158 | Q | L | -0.8596 | |
| 159 | Q | L | 0.0000 | |
| 160 | K | L | -1.8411 | |
| 161 | P | L | -1.2815 | |
| 162 | G | L | -1.6945 | |
| 163 | K | L | -2.5591 | |
| 164 | A | L | -1.5536 | |
| 165 | P | L | 0.0000 | |
| 166 | K | L | -1.1910 | |
| 167 | L | L | 0.0000 | |
| 168 | L | L | 0.0000 | |
| 169 | I | L | 0.0000 | |
| 170 | Y | L | 0.1367 | |
| 171 | A | L | -0.3318 | |
| 172 | A | L | 0.0000 | |
| 173 | S | L | -0.3253 | |
| 174 | T | L | -0.0052 | |
| 175 | L | L | 0.2541 | |
| 176 | Q | L | -0.2348 | |
| 177 | S | L | -0.3712 | |
| 178 | G | L | -0.5026 | |
| 179 | V | L | -0.3285 | |
| 180 | P | L | -0.3594 | |
| 181 | S | L | -0.4444 | |
| 182 | R | L | -0.8497 | |
| 183 | F | L | 0.0000 | |
| 184 | S | L | -0.3710 | |
| 185 | G | L | -0.2828 | |
| 186 | S | L | -0.7306 | |
| 187 | G | L | -1.4130 | |
| 188 | S | L | -1.7996 | |
| 189 | G | L | -2.1510 | |
| 190 | T | L | -2.2969 | |
| 191 | D | L | -2.4742 | |
| 192 | F | L | 0.0000 | |
| 193 | T | L | -0.7513 | |
| 194 | L | L | 0.0000 | |
| 195 | T | L | -0.6628 | |
| 196 | I | L | 0.0000 | |
| 197 | S | L | -1.4562 | |
| 198 | S | L | -1.2096 | |
| 199 | L | L | 0.0000 | |
| 200 | Q | L | -0.7252 | |
| 201 | P | L | -1.0990 | |
| 202 | E | L | -1.7511 | |
| 203 | D | L | 0.0000 | |
| 204 | V | L | -0.8593 | |
| 205 | A | L | 0.0000 | |
| 206 | T | L | -1.1888 | |
| 207 | Y | L | 0.0000 | |
| 208 | Y | L | 0.0000 | |
| 209 | C | L | 0.0000 | |
| 210 | Q | L | 0.0000 | |
| 211 | R | L | 0.0000 | |
| 212 | Y | L | 0.0000 | |
| 213 | N | L | -1.5046 | |
| 214 | R | L | -2.0313 | |
| 215 | A | L | -1.1518 | |
| 216 | P | L | -1.4549 | |
| 217 | Y | L | 0.0000 | |
| 218 | T | L | -1.0013 | |
| 219 | F | L | -0.4737 | |
| 220 | G | L | 0.0000 | |
| 221 | Q | L | -1.8629 | |
| 222 | G | L | 0.0000 | |
| 223 | T | L | 0.0000 | |
| 224 | K | L | -2.0035 | |
| 225 | V | L | 0.0000 | |
| 226 | E | L | -1.8024 | |
| 227 | I | L | -1.0419 | |
| 228 | K | L | -1.6008 |