Project name: db407efe02e27ed

Status: done

Started: 2026-04-28 07:23:49
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSAITWNSGHIDYADSVEGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAKVSYLSTASSLDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQGIRNYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQRYNRAPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:40)
Show buried residues

Minimal score value
-2.8461
Maximal score value
1.9221
Average score
-0.6466
Total score value
-147.4147

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1323
2 V H -1.1704
3 Q H -1.2323
4 L H 0.0000
5 V H 1.0366
6 E H 0.4013
7 S H -0.1423
8 G H -0.4120
9 G H 0.1962
10 G H 0.8463
11 L H 1.5233
12 V H -0.0856
13 Q H -1.1572
14 P H -1.7161
15 G H -1.9973
16 R H -2.5595
17 S H -1.6210
18 L H -0.8297
19 R H -1.1291
20 L H 0.0000
21 S H -0.1920
22 C H 0.0000
23 A H -0.1650
24 A H 0.0000
25 S H -1.0794
26 G H -1.2720
27 F H -0.8260
28 T H -0.8133
29 F H 0.0000
30 D H -2.1201
31 D H -0.8882
32 Y H 0.2215
33 A H 0.0000
34 M H 0.0000
35 H H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.7004
40 A H -1.0801
41 P H -0.8473
42 G H -1.4773
43 K H -2.3613
44 G H -1.6212
45 L H 0.0000
46 E H -1.0240
47 W H 0.0000
48 V H 0.0000
49 S H 0.0000
50 A H 0.0000
51 I H 0.0000
52 T H 0.0000
53 W H -0.8903
54 N H -1.9282
55 S H -1.1482
56 G H -1.0940
57 H H -0.9242
58 I H 0.3946
59 D H -0.4942
60 Y H -0.7596
61 A H 0.0000
62 D H -2.6336
63 S H -1.7106
64 V H 0.0000
65 E H -2.6558
66 G H -1.7493
67 R H -1.3017
68 F H 0.0000
69 T H -0.5875
70 I H 0.0000
71 S H -0.1221
72 R H -1.0923
73 D H -1.6233
74 N H -2.0891
75 A H -1.4875
76 K H -2.4477
77 N H -2.0887
78 S H -1.1666
79 L H 0.0000
80 Y H -0.2754
81 L H 0.0000
82 Q H -0.7193
83 M H 0.0000
84 N H -1.5836
85 S H -1.6331
86 L H 0.0000
87 R H -2.0539
88 A H -1.4432
89 E H -2.1185
90 D H 0.0000
91 T H -0.3430
92 A H 0.0000
93 V H 0.5225
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 K H 0.0000
99 V H 0.0000
100 S H 1.0596
101 Y H 1.9129
102 L H 1.9221
103 S H 0.8347
104 T H 0.1053
105 A H -0.2431
106 S H 0.2906
107 S H 0.0000
108 L H 0.0000
109 D H 0.1615
110 Y H 0.3384
111 W H 0.0000
112 G H 0.0000
113 Q H -1.1933
114 G H -0.3605
115 T H 0.4456
116 L H 1.3812
117 V H 0.0000
118 T H 0.4565
119 V H 0.0000
120 S H -0.4075
121 S H -0.3160
122 D L -2.4938
123 I L 0.0000
124 Q L -2.3362
125 M L 0.0000
126 T L -1.4600
127 Q L 0.0000
128 S L -0.7395
129 P L -0.5508
130 S L -0.9421
131 S L -1.1597
132 L L -0.9113
133 S L -1.0969
134 A L -1.0794
135 S L -0.8257
136 V L 0.0971
137 G L -0.6832
138 D L -1.7453
139 R L -2.3061
140 V L 0.0000
141 T L -0.6494
142 I L 0.0000
143 T L -0.8171
144 C L 0.0000
145 R L -2.8461
146 A L 0.0000
147 S L -2.1291
148 Q L -2.5900
149 G L -2.1503
150 I L 0.0000
151 R L -2.6284
152 N L -1.6804
153 Y L -0.9104
154 L L 0.0000
155 A L 0.0000
156 W L 0.0000
157 Y L 0.0000
158 Q L -0.8596
159 Q L 0.0000
160 K L -1.8411
161 P L -1.2815
162 G L -1.6945
163 K L -2.5591
164 A L -1.5536
165 P L 0.0000
166 K L -1.1910
167 L L 0.0000
168 L L 0.0000
169 I L 0.0000
170 Y L 0.1367
171 A L -0.3318
172 A L 0.0000
173 S L -0.3253
174 T L -0.0052
175 L L 0.2541
176 Q L -0.2348
177 S L -0.3712
178 G L -0.5026
179 V L -0.3285
180 P L -0.3594
181 S L -0.4444
182 R L -0.8497
183 F L 0.0000
184 S L -0.3710
185 G L -0.2828
186 S L -0.7306
187 G L -1.4130
188 S L -1.7996
189 G L -2.1510
190 T L -2.2969
191 D L -2.4742
192 F L 0.0000
193 T L -0.7513
194 L L 0.0000
195 T L -0.6628
196 I L 0.0000
197 S L -1.4562
198 S L -1.2096
199 L L 0.0000
200 Q L -0.7252
201 P L -1.0990
202 E L -1.7511
203 D L 0.0000
204 V L -0.8593
205 A L 0.0000
206 T L -1.1888
207 Y L 0.0000
208 Y L 0.0000
209 C L 0.0000
210 Q L 0.0000
211 R L 0.0000
212 Y L 0.0000
213 N L -1.5046
214 R L -2.0313
215 A L -1.1518
216 P L -1.4549
217 Y L 0.0000
218 T L -1.0013
219 F L -0.4737
220 G L 0.0000
221 Q L -1.8629
222 G L 0.0000
223 T L 0.0000
224 K L -2.0035
225 V L 0.0000
226 E L -1.8024
227 I L -1.0419
228 K L -1.6008
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Laboratory of Theory of Biopolymers 2018