Project name: A?16-22_8

Status: done

Started: 2026-06-19 11:21:52
Settings
Chain sequence(s) A: KLVFFAE
C: KLVFFAE
B: KLVFFAE
E: KLVFFAE
D: KLVFFAE
G: KLVFFAE
F: KLVFFAE
H: KLVFFAE
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:40)
Show buried residues

Minimal score value
-2.3611
Maximal score value
1.6242
Average score
-0.4469
Total score value
-25.024

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.5619
2 L A -0.3316
3 V A 0.3711
4 F A 0.0000
5 F A 0.0453
6 A A -1.1578
7 E A -2.1394
1 K B -1.4459
2 L B -0.2840
3 V B 0.4435
4 F B 0.0000
5 F B -0.3159
6 A B -1.4196
7 E B -2.3611
1 K C -1.9634
2 L C 0.0000
3 V C 0.5825
4 F C 0.0000
5 F C 1.2158
6 A C -0.5413
7 E C -1.8238
1 K D -1.5609
2 L D 0.0000
3 V D 0.8648
4 F D 0.0000
5 F D 0.9539
6 A D -0.6829
7 E D -1.9004
1 K E -1.3541
2 L E 0.0330
3 V E 0.8041
4 F E 0.0000
5 F E 0.7226
6 A E -0.6286
7 E E -1.8671
1 K F -1.5986
2 L F 0.1073
3 V F 1.6242
4 F F 0.0000
5 F F 0.7799
6 A F -0.6983
7 E F -2.0321
1 K G -1.3705
2 L G 0.2321
3 V G 1.0988
4 F G 0.0000
5 F G 0.1596
6 A G -0.9903
7 E G -2.2568
1 K H -1.7226
2 L H 0.0000
3 V H 0.5496
4 F H 0.0000
5 F H 0.8797
6 A H -0.6709
7 E H -1.8120
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Laboratory of Theory of Biopolymers 2018