| Chain sequence(s) |
H: EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIDPSDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARVGPADVWDSFDYWGQGTLVTVSS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLLSPWNSNQLAWYQQKPGQPPKLLIYGASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYLIPSTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0972 | |
| 2 | V | H | -1.1791 | |
| 3 | Q | H | -1.2462 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.5335 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.3443 | |
| 8 | G | H | -0.4502 | |
| 9 | A | H | 0.1841 | |
| 11 | E | H | 0.2294 | |
| 12 | V | H | 1.1383 | |
| 13 | K | H | -0.8790 | |
| 14 | K | H | -2.0790 | |
| 15 | P | H | -1.8991 | |
| 16 | G | H | -1.9000 | |
| 17 | E | H | -2.3583 | |
| 18 | S | H | -1.7043 | |
| 19 | L | H | 0.0000 | |
| 20 | K | H | -1.3602 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.3013 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.2724 | |
| 25 | G | H | 0.0000 | |
| 26 | S | H | -0.6449 | |
| 27 | G | H | -1.2105 | |
| 28 | Y | H | -0.5664 | |
| 29 | S | H | -0.2472 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.7583 | |
| 36 | S | H | -0.2044 | |
| 37 | Y | H | 0.1120 | |
| 38 | W | H | 0.0538 | |
| 39 | I | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | -0.4856 | |
| 44 | Q | H | -0.7338 | |
| 45 | M | H | -0.6686 | |
| 46 | P | H | -0.8437 | |
| 47 | G | H | -1.3578 | |
| 48 | K | H | -2.1970 | |
| 49 | G | H | -1.3681 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7669 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | I | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -1.0894 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -1.4813 | |
| 62 | D | H | -2.2542 | |
| 63 | S | H | -1.6490 | |
| 64 | D | H | -1.4367 | |
| 65 | T | H | -0.9130 | |
| 66 | R | H | -0.9938 | |
| 67 | Y | H | -0.6335 | |
| 68 | S | H | 0.0000 | |
| 69 | P | H | -1.0488 | |
| 70 | S | H | -0.8192 | |
| 71 | F | H | -1.0451 | |
| 72 | Q | H | -1.8481 | |
| 74 | G | H | -1.6020 | |
| 75 | Q | H | -1.8553 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.8000 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5238 | |
| 80 | A | H | -0.7660 | |
| 81 | D | H | -0.7633 | |
| 82 | K | H | -1.0206 | |
| 83 | S | H | 0.0459 | |
| 84 | I | H | 1.1029 | |
| 85 | S | H | -0.0300 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3807 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1199 | |
| 91 | W | H | 0.0000 | |
| 92 | S | H | -1.2025 | |
| 93 | S | H | -1.5498 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -1.5037 | |
| 96 | A | H | -0.8583 | |
| 97 | S | H | -0.4297 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.0118 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | 0.1353 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | V | H | 0.0000 | |
| 108 | G | H | -0.1151 | |
| 109 | P | H | -0.5451 | |
| 110 | A | H | -0.5679 | |
| 111 | D | H | -1.2095 | |
| 112A | V | H | 0.4429 | |
| 112 | W | H | 0.3663 | |
| 113 | D | H | 0.0000 | |
| 114 | S | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.0160 | |
| 117 | Y | H | 0.1508 | |
| 118 | W | H | -0.1411 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0641 | |
| 121 | G | H | -0.5020 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.5247 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2336 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7619 | |
| 128 | S | H | -0.9772 | |
| 1 | D | L | -1.4190 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7115 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.7493 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.3812 | |
| 8 | P | L | -1.3894 | |
| 9 | D | L | -2.2995 | |
| 10 | S | L | -1.4766 | |
| 11 | L | L | -0.7814 | |
| 12 | A | L | -0.4982 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -0.8559 | |
| 15 | L | L | 0.0452 | |
| 16 | G | L | -1.1598 | |
| 17 | E | L | -2.3573 | |
| 18 | R | L | -2.6437 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6492 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -1.5988 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.3463 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.9687 | |
| 27 | Q | L | -1.5548 | |
| 28 | S | L | -0.9728 | |
| 29 | V | L | 0.0000 | |
| 30 | L | L | 0.0605 | |
| 31 | L | L | 0.2846 | |
| 32 | S | L | -0.3590 | |
| 33 | P | L | -0.1374 | |
| 34 | W | L | 0.2551 | |
| 35 | N | L | -0.8340 | |
| 36 | S | L | -0.2536 | |
| 37 | N | L | -0.1399 | |
| 38 | Q | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3290 | |
| 46 | P | L | -1.0006 | |
| 47 | G | L | -1.4158 | |
| 48 | Q | L | -2.0368 | |
| 49 | P | L | -1.2793 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0619 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1689 | |
| 56 | G | L | -0.2048 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5072 | |
| 66 | T | L | -0.4197 | |
| 67 | R | L | -1.1693 | |
| 68 | E | L | -0.8448 | |
| 69 | S | L | -0.7378 | |
| 70 | G | L | -0.9828 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.3364 | |
| 74 | D | L | -2.1740 | |
| 75 | R | L | -1.5882 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.8200 | |
| 78 | G | L | -0.4760 | |
| 79 | S | L | -0.7704 | |
| 80 | G | L | -1.3303 | |
| 83 | S | L | -1.0330 | |
| 84 | G | L | -0.9287 | |
| 85 | T | L | -1.6378 | |
| 86 | D | L | -2.3602 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -1.0375 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6370 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6800 | |
| 93 | S | L | -1.7423 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.2447 | |
| 96 | A | L | -0.5198 | |
| 97 | E | L | -1.2888 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.4074 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.5551 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | Y | L | 0.8468 | |
| 109 | L | L | 0.7436 | |
| 114 | I | L | 0.3792 | |
| 115 | P | L | -0.1971 | |
| 116 | S | L | 0.0000 | |
| 117 | T | L | 0.1102 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.3211 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4099 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.9035 | |
| 126 | I | L | -0.0327 | |
| 127 | K | L | -1.2803 |