| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSS
L: QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0440 | |
| 2 | V | H | -0.9459 | |
| 3 | Q | H | -0.9137 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.8712 | |
| 6 | E | H | 0.2643 | |
| 7 | S | H | -0.2204 | |
| 8 | G | H | -0.6254 | |
| 9 | G | H | 0.1695 | |
| 11 | G | H | 0.7661 | |
| 12 | L | H | 1.3689 | |
| 13 | V | H | -0.0111 | |
| 14 | Q | H | -1.3066 | |
| 15 | P | H | -1.4815 | |
| 16 | G | H | -1.3322 | |
| 17 | G | H | -0.9539 | |
| 18 | S | H | -1.0175 | |
| 19 | L | H | -0.4725 | |
| 20 | R | H | -1.2840 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2720 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1719 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0088 | |
| 27 | G | H | -1.2742 | |
| 28 | F | H | -0.7341 | |
| 29 | T | H | -0.6346 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.5168 | |
| 36 | D | H | -1.4726 | |
| 37 | Y | H | -0.6363 | |
| 38 | D | H | -0.6379 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6312 | |
| 45 | A | H | -1.0128 | |
| 46 | P | H | -0.8126 | |
| 47 | G | H | -1.4525 | |
| 48 | K | H | -2.2462 | |
| 49 | G | H | -1.4657 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9341 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | T | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -0.7106 | |
| 58 | L | H | -1.1392 | |
| 59 | D | H | -2.1550 | |
| 62 | S | H | -1.0385 | |
| 63 | G | H | -0.7805 | |
| 64 | S | H | 0.0423 | |
| 65 | I | H | 1.1845 | |
| 66 | Y | H | 0.7476 | |
| 67 | Y | H | -0.2604 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.1386 | |
| 70 | S | H | -1.6310 | |
| 71 | V | H | 0.0000 | |
| 72 | Q | H | -1.9166 | |
| 74 | G | H | -1.4531 | |
| 75 | R | H | -1.2768 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.4632 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1853 | |
| 80 | R | H | -1.0726 | |
| 81 | D | H | -1.5851 | |
| 82 | N | H | -2.0009 | |
| 83 | S | H | -1.5673 | |
| 84 | K | H | -2.4104 | |
| 85 | N | H | -1.8993 | |
| 86 | T | H | -0.9976 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3409 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9512 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2089 | |
| 93 | S | H | -1.1601 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -1.8397 | |
| 96 | A | H | -1.5153 | |
| 97 | E | H | -2.0905 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3044 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.6887 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | L | H | -0.1544 | |
| 109 | H | H | -0.6134 | |
| 110 | M | H | 0.1670 | |
| 111 | G | H | -0.3954 | |
| 112A | P | H | -0.6182 | |
| 112 | E | H | -0.7571 | |
| 113 | G | H | -0.5912 | |
| 114 | P | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0256 | |
| 117 | Y | H | 0.6002 | |
| 118 | W | H | 0.1259 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.7779 | |
| 121 | G | H | -0.0546 | |
| 122 | T | H | 0.4438 | |
| 123 | L | H | 1.4251 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3521 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6843 | |
| 128 | S | H | -0.6053 | |
| 1 | Q | L | -0.8958 | |
| 2 | S | L | -0.0733 | |
| 3 | V | L | 1.1467 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | 0.0947 | |
| 6 | Q | L | -0.3712 | |
| 7 | P | L | -0.5962 | |
| 8 | P | L | -0.7689 | |
| 9 | S | L | -0.7694 | |
| 11 | A | L | -0.4858 | |
| 12 | S | L | -0.1019 | |
| 13 | G | L | 0.0000 | |
| 14 | T | L | -0.3489 | |
| 15 | P | L | -1.1917 | |
| 16 | G | L | -1.8693 | |
| 17 | Q | L | -2.4447 | |
| 18 | R | L | -2.5902 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6564 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.3886 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.2611 | |
| 25 | G | L | -0.0650 | |
| 26 | S | L | -0.2600 | |
| 27 | S | L | -0.6859 | |
| 28 | S | L | -0.3406 | |
| 29 | N | L | 0.0000 | |
| 30 | I | L | 0.0000 | |
| 35 | G | L | -1.0042 | |
| 36 | S | L | -0.6618 | |
| 37 | N | L | -0.5296 | |
| 38 | S | L | -0.7400 | |
| 39 | V | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.6154 | |
| 45 | L | L | -0.5837 | |
| 46 | P | L | -0.5422 | |
| 47 | G | L | -0.6452 | |
| 48 | T | L | -0.6097 | |
| 49 | A | L | -0.5528 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.7165 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -1.1247 | |
| 56 | S | L | -1.2783 | |
| 57 | D | L | -1.5588 | |
| 65 | N | L | -2.2275 | |
| 66 | H | L | -2.0832 | |
| 67 | R | L | -2.0215 | |
| 68 | P | L | -0.9171 | |
| 69 | S | L | -0.7593 | |
| 70 | G | L | -0.9563 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.4182 | |
| 74 | D | L | -2.2351 | |
| 75 | R | L | -1.7116 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.3640 | |
| 78 | G | L | -1.2749 | |
| 79 | S | L | -1.1412 | |
| 80 | K | L | -1.2305 | |
| 83 | S | L | -0.8469 | |
| 84 | G | L | -0.9568 | |
| 85 | T | L | -0.8195 | |
| 86 | S | L | -0.7149 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.6035 | |
| 89 | L | L | 0.0000 | |
| 90 | A | L | -0.7359 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.9882 | |
| 93 | G | L | -1.9058 | |
| 94 | L | L | 0.0000 | |
| 95 | R | L | -2.3823 | |
| 96 | S | L | -1.7413 | |
| 97 | E | L | -2.4409 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.3494 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.8946 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | G | L | 0.0000 | |
| 107 | W | L | 0.1333 | |
| 108 | D | L | 0.0000 | |
| 109 | T | L | -0.1102 | |
| 110 | S | L | -0.0123 | |
| 113 | L | L | 0.1385 | |
| 114 | S | L | -0.0406 | |
| 115 | G | L | 0.0000 | |
| 116 | H | L | 0.0556 | |
| 117 | V | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7315 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1852 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.1916 | |
| 126 | V | L | 0.0265 | |
| 127 | L | L | 1.3428 |