| Chain sequence(s) |
A: MVAKEIKSGIGNKGKIPWPRINTDMNFLETMTKKTRNKTKQNAAIMGRLTWESIPAKYRPLPERFNIVLSSKKFEDIAPGAHMVCSSLSFAMEKLRAPPLSDQIENVWIFGGAGVYEESMKHPDCDKLYVTEVLQEFPCDAFCPPIDSDIYKLIDHSDDPDVPKGEFVENGVKFKFEVYQR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:33)
[INFO] Main: Simulation completed successfully. (00:02:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.0000 | |
| 2 | V | A | 0.0000 | |
| 3 | A | A | 0.1288 | |
| 4 | K | A | 0.0000 | |
| 5 | E | A | 0.0000 | |
| 6 | I | A | -0.3319 | |
| 7 | K | A | -1.4784 | |
| 8 | S | A | -0.2952 | |
| 9 | G | A | 0.0000 | |
| 10 | I | A | 0.1362 | |
| 11 | G | A | -0.9714 | |
| 12 | N | A | -1.9073 | |
| 13 | K | A | -2.7604 | |
| 14 | G | A | -2.0079 | |
| 15 | K | A | -2.0295 | |
| 16 | I | A | -0.7534 | |
| 17 | P | A | -1.0063 | |
| 18 | W | A | 0.0000 | |
| 19 | P | A | -1.3763 | |
| 20 | R | A | -2.1948 | |
| 21 | I | A | 0.0000 | |
| 22 | N | A | -1.7646 | |
| 23 | T | A | -0.7629 | |
| 24 | D | A | 0.0000 | |
| 25 | M | A | -0.9889 | |
| 26 | N | A | -1.4441 | |
| 27 | F | A | -0.6126 | |
| 28 | L | A | -0.5213 | |
| 29 | E | A | -1.6160 | |
| 30 | T | A | -1.3849 | |
| 31 | M | A | -1.1146 | |
| 32 | T | A | 0.0000 | |
| 33 | K | A | -2.4320 | |
| 34 | K | A | -3.0360 | |
| 35 | T | A | -2.9149 | |
| 36 | R | A | -3.3286 | |
| 37 | N | A | -3.3747 | |
| 38 | K | A | -3.0212 | |
| 39 | T | A | -2.0903 | |
| 40 | K | A | -2.8440 | |
| 41 | Q | A | -2.4881 | |
| 42 | N | A | 0.0000 | |
| 43 | A | A | 0.0000 | |
| 44 | A | A | 0.0000 | |
| 45 | I | A | 0.0000 | |
| 46 | M | A | 0.0000 | |
| 47 | G | A | -0.0848 | |
| 48 | R | A | -0.6618 | |
| 49 | L | A | 0.5123 | |
| 50 | T | A | -0.0969 | |
| 51 | W | A | 0.0000 | |
| 52 | E | A | -0.7634 | |
| 53 | S | A | -0.5614 | |
| 54 | I | A | -0.2687 | |
| 55 | P | A | -0.4990 | |
| 56 | A | A | -0.7985 | |
| 57 | K | A | -1.2227 | |
| 58 | Y | A | 0.1784 | |
| 59 | R | A | -0.6671 | |
| 60 | P | A | -0.7469 | |
| 61 | L | A | 0.0000 | |
| 62 | P | A | -1.1340 | |
| 63 | E | A | -2.4599 | |
| 64 | R | A | 0.0000 | |
| 65 | F | A | -0.5150 | |
| 66 | N | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | V | A | 0.0000 | |
| 69 | L | A | 0.2516 | |
| 70 | S | A | 0.0000 | |
| 71 | S | A | -0.9142 | |
| 72 | K | A | -1.8677 | |
| 73 | K | A | -1.1828 | |
| 74 | F | A | -0.1227 | |
| 75 | E | A | -1.8108 | |
| 76 | D | A | -1.9385 | |
| 77 | I | A | -0.2650 | |
| 78 | A | A | 0.0000 | |
| 79 | P | A | -0.5633 | |
| 80 | G | A | -0.4326 | |
| 81 | A | A | -0.2371 | |
| 82 | H | A | -0.2787 | |
| 83 | M | A | -0.2614 | |
| 84 | V | A | 0.0282 | |
| 85 | C | A | 0.0000 | |
| 86 | S | A | -0.1211 | |
| 87 | S | A | -0.2061 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -0.5103 | |
| 90 | F | A | 0.2715 | |
| 91 | A | A | 0.0000 | |
| 92 | M | A | -0.9048 | |
| 93 | E | A | -2.1963 | |
| 94 | K | A | -1.5629 | |
| 95 | L | A | 0.0000 | |
| 96 | R | A | -2.6153 | |
| 97 | A | A | -1.6107 | |
| 98 | P | A | -1.2391 | |
| 99 | P | A | -1.0828 | |
| 100 | L | A | -1.4143 | |
| 101 | S | A | -1.8627 | |
| 102 | D | A | -2.5481 | |
| 103 | Q | A | -2.1509 | |
| 104 | I | A | 0.0000 | |
| 105 | E | A | -1.9212 | |
| 106 | N | A | -0.8336 | |
| 107 | V | A | 0.7731 | |
| 108 | W | A | 0.0000 | |
| 109 | I | A | 0.5869 | |
| 110 | F | A | 0.5872 | |
| 111 | G | A | 0.0000 | |
| 112 | G | A | -0.0722 | |
| 113 | A | A | -0.5637 | |
| 114 | G | A | -1.3617 | |
| 115 | V | A | -1.4145 | |
| 116 | Y | A | -1.5094 | |
| 117 | E | A | -3.1149 | |
| 118 | E | A | -3.4591 | |
| 119 | S | A | -2.1931 | |
| 120 | M | A | -2.4712 | |
| 121 | K | A | -3.3115 | |
| 122 | H | A | -2.6187 | |
| 123 | P | A | -1.7785 | |
| 124 | D | A | -2.0795 | |
| 125 | C | A | -0.8140 | |
| 126 | D | A | -1.2333 | |
| 127 | K | A | -0.8627 | |
| 128 | L | A | -0.3160 | |
| 129 | Y | A | 0.0306 | |
| 130 | V | A | 0.0000 | |
| 131 | T | A | 0.0000 | |
| 132 | E | A | -0.5847 | |
| 133 | V | A | 0.0000 | |
| 134 | L | A | -0.6499 | |
| 135 | Q | A | -1.5750 | |
| 136 | E | A | -2.0969 | |
| 137 | F | A | -0.8433 | |
| 138 | P | A | -0.9824 | |
| 139 | C | A | -1.4124 | |
| 140 | D | A | -2.1031 | |
| 141 | A | A | -0.5273 | |
| 142 | F | A | 0.2748 | |
| 143 | C | A | 0.0000 | |
| 144 | P | A | -0.3677 | |
| 145 | P | A | -0.4428 | |
| 146 | I | A | -0.3641 | |
| 147 | D | A | -1.3907 | |
| 148 | S | A | -1.4122 | |
| 149 | D | A | -1.8502 | |
| 150 | I | A | -0.1996 | |
| 151 | Y | A | 0.0000 | |
| 152 | K | A | -1.9014 | |
| 153 | L | A | -0.5007 | |
| 154 | I | A | -0.9292 | |
| 155 | D | A | -2.0181 | |
| 156 | H | A | -2.0125 | |
| 157 | S | A | -1.9061 | |
| 158 | D | A | -2.7463 | |
| 159 | D | A | -2.6852 | |
| 160 | P | A | -1.4139 | |
| 161 | D | A | -1.1595 | |
| 162 | V | A | -0.5122 | |
| 163 | P | A | -1.1528 | |
| 164 | K | A | -2.2384 | |
| 165 | G | A | -1.3936 | |
| 166 | E | A | -1.7453 | |
| 167 | F | A | 0.1587 | |
| 168 | V | A | 0.7074 | |
| 169 | E | A | -0.6061 | |
| 170 | N | A | -1.7049 | |
| 171 | G | A | -0.8311 | |
| 172 | V | A | -0.5914 | |
| 173 | K | A | -1.1087 | |
| 174 | F | A | 0.0000 | |
| 175 | K | A | -0.9825 | |
| 176 | F | A | 0.0000 | |
| 177 | E | A | -0.4621 | |
| 178 | V | A | 0.0000 | |
| 179 | Y | A | -0.5318 | |
| 180 | Q | A | -0.8292 | |
| 181 | R | A | -1.2491 |