| Chain sequence(s) |
A: VKPIRLFFGQQRRDVYPSALRRLLRFIAPDLVITHMEAHVNEATGRGKGCAWVIVPSVLEAKRLLRLSGRIFLDINSNGEEVYLFAPPNCREWLSEYADYVVSSTTRASHLPYLPMVVGVPKKECIYVRELLAPYIYDPNRGDCPPYADAVSEFKGLLEDHASLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 0.9368 | |
| 2 | K | A | -0.8977 | |
| 3 | P | A | -0.6044 | |
| 4 | I | A | 0.0000 | |
| 5 | R | A | -0.7540 | |
| 6 | L | A | 0.0000 | |
| 7 | F | A | 0.8290 | |
| 8 | F | A | 0.0000 | |
| 9 | G | A | 0.0000 | |
| 10 | Q | A | -0.0792 | |
| 11 | Q | A | -0.6984 | |
| 12 | R | A | -1.0649 | |
| 13 | R | A | -2.0756 | |
| 14 | D | A | -0.9152 | |
| 15 | V | A | -0.0520 | |
| 16 | Y | A | 0.7803 | |
| 17 | P | A | -0.5948 | |
| 18 | S | A | -0.6448 | |
| 19 | A | A | -0.6859 | |
| 20 | L | A | 0.0000 | |
| 21 | R | A | -2.2340 | |
| 22 | R | A | -2.0318 | |
| 23 | L | A | 0.0000 | |
| 24 | L | A | 0.0000 | |
| 25 | R | A | -2.0290 | |
| 26 | F | A | -0.0807 | |
| 27 | I | A | -0.0779 | |
| 28 | A | A | -0.6912 | |
| 29 | P | A | -1.2940 | |
| 30 | D | A | -1.5650 | |
| 31 | L | A | 0.0000 | |
| 32 | V | A | 1.2060 | |
| 33 | I | A | 0.5003 | |
| 34 | T | A | 0.0995 | |
| 35 | H | A | -0.9767 | |
| 36 | M | A | 0.0000 | |
| 37 | E | A | -1.4926 | |
| 38 | A | A | -0.7887 | |
| 39 | H | A | -1.1547 | |
| 40 | V | A | -1.3820 | |
| 41 | N | A | -1.9291 | |
| 42 | E | A | -2.3074 | |
| 43 | A | A | -1.2647 | |
| 44 | T | A | -1.3221 | |
| 45 | G | A | -1.7854 | |
| 46 | R | A | -2.6849 | |
| 47 | G | A | 0.0000 | |
| 48 | K | A | -1.9706 | |
| 49 | G | A | -1.5511 | |
| 50 | C | A | -0.6135 | |
| 51 | A | A | 0.0000 | |
| 52 | W | A | -0.4301 | |
| 53 | V | A | 0.0000 | |
| 54 | I | A | -0.1011 | |
| 55 | V | A | 0.0000 | |
| 56 | P | A | 0.4429 | |
| 57 | S | A | 0.8578 | |
| 58 | V | A | 1.1047 | |
| 59 | L | A | 1.6837 | |
| 60 | E | A | 0.0000 | |
| 61 | A | A | 0.0000 | |
| 62 | K | A | -0.1085 | |
| 63 | R | A | -0.6594 | |
| 64 | L | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | R | A | -1.5036 | |
| 67 | L | A | 0.0000 | |
| 68 | S | A | 0.0000 | |
| 69 | G | A | 0.0000 | |
| 70 | R | A | -0.4075 | |
| 71 | I | A | 0.0000 | |
| 72 | F | A | 0.0000 | |
| 73 | L | A | 0.0000 | |
| 74 | D | A | 0.0000 | |
| 75 | I | A | -0.5721 | |
| 76 | N | A | -1.1432 | |
| 77 | S | A | -1.0919 | |
| 78 | N | A | -1.7267 | |
| 79 | G | A | -0.8912 | |
| 80 | E | A | -1.2437 | |
| 81 | E | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | -0.6542 | |
| 84 | L | A | 0.0000 | |
| 85 | F | A | 0.1677 | |
| 86 | A | A | 0.0000 | |
| 87 | P | A | -0.2046 | |
| 88 | P | A | -1.3374 | |
| 89 | N | A | -2.2088 | |
| 90 | C | A | 0.0000 | |
| 91 | R | A | 0.0000 | |
| 92 | E | A | -1.9800 | |
| 93 | W | A | -1.3081 | |
| 94 | L | A | 0.0000 | |
| 95 | S | A | -0.8299 | |
| 96 | E | A | -1.4723 | |
| 97 | Y | A | -0.3205 | |
| 98 | A | A | 0.0000 | |
| 99 | D | A | -0.9932 | |
| 100 | Y | A | 0.4397 | |
| 101 | V | A | 0.5034 | |
| 102 | V | A | 0.6363 | |
| 103 | S | A | 0.0814 | |
| 104 | S | A | -0.0494 | |
| 105 | T | A | 0.3396 | |
| 106 | T | A | 0.3102 | |
| 107 | R | A | 0.3220 | |
| 108 | A | A | 0.0052 | |
| 109 | S | A | -0.5210 | |
| 110 | H | A | -1.0834 | |
| 111 | L | A | 0.0000 | |
| 112 | P | A | 0.0000 | |
| 113 | Y | A | 1.2246 | |
| 114 | L | A | 0.7349 | |
| 115 | P | A | 0.0000 | |
| 116 | M | A | 0.0000 | |
| 117 | V | A | 0.9355 | |
| 118 | V | A | 0.0000 | |
| 119 | G | A | 0.3645 | |
| 120 | V | A | -0.4766 | |
| 121 | P | A | -1.2703 | |
| 122 | K | A | -2.2199 | |
| 123 | K | A | -2.2353 | |
| 124 | E | A | 0.0000 | |
| 125 | C | A | 0.5013 | |
| 126 | I | A | 1.6639 | |
| 127 | Y | A | 1.7491 | |
| 128 | V | A | 0.0000 | |
| 129 | R | A | -0.4909 | |
| 130 | E | A | -0.8104 | |
| 131 | L | A | 0.0814 | |
| 132 | L | A | 0.0000 | |
| 133 | A | A | -0.2409 | |
| 134 | P | A | -0.0890 | |
| 135 | Y | A | 0.1975 | |
| 136 | I | A | 0.7880 | |
| 137 | Y | A | -0.0548 | |
| 138 | D | A | -1.5223 | |
| 139 | P | A | -1.7037 | |
| 140 | N | A | -2.6630 | |
| 141 | R | A | -2.7654 | |
| 142 | G | A | -2.4084 | |
| 143 | D | A | -2.6337 | |
| 144 | C | A | -1.5312 | |
| 145 | P | A | -0.9367 | |
| 146 | P | A | -0.5417 | |
| 147 | Y | A | 0.2310 | |
| 148 | A | A | -0.4805 | |
| 149 | D | A | -1.2958 | |
| 150 | A | A | -0.0930 | |
| 151 | V | A | 1.1198 | |
| 152 | S | A | 0.0610 | |
| 153 | E | A | -1.5111 | |
| 154 | F | A | -0.9830 | |
| 155 | K | A | -1.7263 | |
| 156 | G | A | -0.6440 | |
| 157 | L | A | 0.5221 | |
| 158 | L | A | -0.4201 | |
| 159 | E | A | -2.0084 | |
| 160 | D | A | -2.4606 | |
| 161 | H | A | -1.6925 | |
| 162 | A | A | -0.9678 | |
| 163 | S | A | 0.0000 | |
| 164 | L | A | -0.1136 | |
| 165 | P | A | 0.5538 | |
| 166 | V | A | 1.5994 |