| Chain sequence(s) |
A: WCKQSGEMCNLLDQNCCDGYCIVLVCT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | W | A | 1.1019 | |
| 2 | C | A | 0.1395 | |
| 3 | K | A | -1.3242 | |
| 4 | Q | A | -1.8718 | |
| 5 | S | A | -1.2949 | |
| 6 | G | A | -0.5519 | |
| 7 | E | A | -1.2327 | |
| 8 | M | A | 0.6770 | |
| 9 | C | A | 0.0000 | |
| 10 | N | A | 0.6635 | |
| 11 | L | A | 2.4507 | |
| 12 | L | A | 0.8990 | |
| 13 | D | A | -1.3840 | |
| 14 | Q | A | -0.4702 | |
| 15 | N | A | -1.4677 | |
| 16 | C | A | -1.2581 | |
| 17 | C | A | -0.6672 | |
| 18 | D | A | -1.7936 | |
| 19 | G | A | -0.8667 | |
| 20 | Y | A | 1.0337 | |
| 21 | C | A | 0.0000 | |
| 22 | I | A | 3.5419 | |
| 23 | V | A | 3.6268 | |
| 24 | L | A | 2.9198 | |
| 25 | V | A | 2.0982 | |
| 26 | C | A | 0.0000 | |
| 27 | T | A | 0.0190 |