Project name: query_structure

Status: done

Started: 2026-03-17 01:31:04
Settings
Chain sequence(s) A: WCKQSGEMCNLLDQNCCDGYCIVLVCT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-1.8718
Maximal score value
3.6268
Average score
0.1847
Total score value
4.988

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 W A 1.1019
2 C A 0.1395
3 K A -1.3242
4 Q A -1.8718
5 S A -1.2949
6 G A -0.5519
7 E A -1.2327
8 M A 0.6770
9 C A 0.0000
10 N A 0.6635
11 L A 2.4507
12 L A 0.8990
13 D A -1.3840
14 Q A -0.4702
15 N A -1.4677
16 C A -1.2581
17 C A -0.6672
18 D A -1.7936
19 G A -0.8667
20 Y A 1.0337
21 C A 0.0000
22 I A 3.5419
23 V A 3.6268
24 L A 2.9198
25 V A 2.0982
26 C A 0.0000
27 T A 0.0190
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Laboratory of Theory of Biopolymers 2018