Project name: Fatma_Nb2_PLO

Status: done

Started: 2025-07-13 18:40:08
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Chain sequence(s) A: QVELVESGGGSVQAGGSLRLSCVGEGFSFEEYPVGWFRQAPGKGREGVVCIGGGNTWYDDSVAGRFAISSDTAKNTVFLQMNNQKPEDTALYFCARRVEYCAGDGCGRIARCGYYSGINFLGGGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:37)
Show buried residues

Minimal score value
-2.7964
Maximal score value
1.0048
Average score
-0.7732
Total score value
-100.5224

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.7922
2 V A -1.2916
3 E A -2.0157
4 L A 0.0000
5 V A 0.2275
6 E A -0.0040
7 S A -0.6980
8 G A -1.1833
9 G A -1.2348
10 G A -0.9484
11 S A -0.7481
12 V A -0.8615
13 Q A -1.7314
14 A A -1.7838
15 G A -1.7813
16 G A -1.3793
17 S A -1.4728
18 L A -1.2310
19 R A -2.0793
20 L A 0.0000
21 S A -0.3845
22 C A 0.0000
23 V A -0.2803
24 G A 0.0000
25 E A -2.3745
26 G A -1.7878
27 F A -1.3825
28 S A -1.7159
29 F A 0.0000
30 E A -2.7964
31 E A -2.7058
32 Y A -1.2506
33 P A 0.0000
34 V A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A 0.0000
38 R A 0.0000
39 Q A -1.8480
40 A A -1.7758
41 P A -1.2237
42 G A -1.6721
43 K A -2.7430
44 G A -2.3446
45 R A -2.2622
46 E A -1.9647
47 G A 0.0000
48 V A 0.0000
49 V A 0.0000
50 C A 0.0000
51 I A 0.0410
52 G A -1.1140
53 G A -1.7401
54 G A -1.2151
55 N A -1.3842
56 T A -0.3368
57 W A -0.2959
58 Y A -0.4531
59 D A -1.8201
60 D A -2.1050
61 S A -1.4227
62 V A 0.0000
63 A A -0.9034
64 G A -1.0412
65 R A -1.1860
66 F A 0.0000
67 A A -0.3903
68 I A 0.0000
69 S A -0.2048
70 S A -0.7030
71 D A -1.1485
72 T A -1.3364
73 A A -1.1762
74 K A -1.8270
75 N A -1.6314
76 T A 0.0000
77 V A 0.0000
78 F A -0.3916
79 L A 0.0000
80 Q A -1.1747
81 M A 0.0000
82 N A -1.8458
83 N A -2.2521
84 Q A 0.0000
85 K A -2.4231
86 P A -1.8667
87 E A -2.3078
88 D A 0.0000
89 T A -1.1574
90 A A 0.0000
91 L A -0.5717
92 Y A 0.0000
93 F A 0.0000
94 C A 0.0000
95 A A 0.0000
96 R A 0.0000
97 R A 0.0000
98 V A 0.2196
99 E A -0.3741
100 Y A 1.0048
101 C A 0.5914
102 A A 0.0025
103 G A -1.0185
104 D A -1.9539
105 G A -1.0085
106 C A -0.0966
107 G A -0.7866
108 R A -1.9489
109 I A -1.1911
110 A A -0.9137
111 R A -1.7013
112 C A 0.0000
113 G A -0.7548
114 Y A 0.6686
115 Y A 0.7605
116 S A 0.3838
117 G A 0.5340
118 I A 0.6692
119 N A 0.2051
120 F A 0.6087
121 L A 0.5997
122 G A 0.0333
123 G A -0.4356
124 G A -0.4158
125 T A -0.7908
126 Q A -1.3795
127 V A 0.0000
128 T A -1.0062
129 V A 0.0000
130 S A -1.1212
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Laboratory of Theory of Biopolymers 2018