Project name: 42K

Status: done

Started: 2026-03-31 08:39:38
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Chain sequence(s) A: APTSSSTKKTQLQLEHLLLDLQMILNGINNYKNPELTRMLTAKFYMPKKATELKHLQCLEEELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFSDSIISTLT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-3.8445
Maximal score value
1.0032
Average score
-0.9394
Total score value
-124.9399

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.1250
2 P A -0.5587
3 T A -0.6144
4 S A -1.0964
5 S A -1.4392
6 S A -1.5422
7 T A -1.3975
8 K A -2.3862
9 K A -2.3265
10 T A -1.3809
11 Q A -0.9682
12 L A -0.1148
13 Q A -0.5420
14 L A 0.0000
15 E A -0.5026
16 H A -0.5626
17 L A 0.0000
18 L A 0.2893
19 L A 1.0032
20 D A -0.0238
21 L A 0.0000
22 Q A -0.1719
23 M A -0.0382
24 I A 0.0000
25 L A -1.0043
26 N A -1.7908
27 G A -1.5707
28 I A 0.0000
29 N A -1.7498
30 N A -1.4667
31 Y A -0.1272
32 K A -1.7378
33 N A 0.0000
34 P A -1.0640
35 E A -1.1607
36 L A -0.7841
37 T A -0.8496
38 R A -1.7453
39 M A 0.0000
40 L A -0.5541
41 T A -0.8178
42 A A -1.2854
43 K A -1.5582
44 F A 0.0000
45 Y A -0.1515
46 M A -1.2476
47 P A 0.0000
48 K A -3.2215
49 K A -3.0123
50 A A 0.0000
51 T A -1.2328
52 E A -1.8243
53 L A -0.9150
54 K A -1.1897
55 H A 0.0000
56 L A 0.0000
57 Q A -0.7135
58 C A 0.0000
59 L A 0.0000
60 E A -0.9549
61 E A -1.2907
62 E A 0.0000
63 L A 0.0000
64 K A -2.8584
65 P A -2.0478
66 L A 0.0000
67 E A -2.9933
68 E A -3.0380
69 V A 0.0000
70 L A 0.0000
71 N A -2.6582
72 L A -1.3703
73 A A 0.0000
74 Q A -2.3784
75 S A -2.2948
76 K A -2.8176
77 N A -2.4513
78 F A 0.0000
79 H A -1.3296
80 L A -1.2559
81 R A -3.2300
82 P A -2.9238
83 R A -3.8445
84 D A -2.9924
85 L A 0.0000
86 I A 0.0000
87 S A -1.6049
88 N A -1.5119
89 I A 0.0000
90 N A -0.5491
91 V A 0.8149
92 I A -0.0712
93 V A 0.0000
94 L A 0.0802
95 E A -1.1779
96 L A 0.0000
97 K A -1.3875
98 G A -1.5000
99 S A -1.5530
100 E A -2.1467
101 T A -0.9271
102 T A -0.2658
103 F A 0.0229
104 M A 0.6303
105 C A -0.7439
106 E A -2.1360
107 Y A -1.5966
108 A A -2.3013
109 D A -2.8477
110 E A -2.7862
111 T A -1.5398
112 A A 0.0000
113 T A -0.7550
114 I A 0.0000
115 V A -0.9781
116 E A -1.8756
117 F A 0.0000
118 L A 0.0000
119 N A -1.4955
120 R A -1.3776
121 W A 0.0000
122 I A -0.6189
123 T A -0.6498
124 F A 0.0000
125 S A 0.0000
126 D A -1.0359
127 S A -0.6154
128 I A -0.2892
129 I A 0.0158
130 S A -0.2540
131 T A 0.0049
132 L A 0.1688
133 T A -0.0829
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Laboratory of Theory of Biopolymers 2018