Project name: E1Growdia

Status: done

Started: 2024-07-04 03:38:34
Settings
Chain sequence(s) B: YEHVTVIPNTVGVPYKTLVNRPGYSPMVLEMELLSVTLEPTLSLDYITCEYKTVVPSPYVKCCGTAECKDKNLPDYSCKVFTGVYPFMWGGAYCFCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFDNKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPESEDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERGASLQHTAPFGCQIATNPVRAVNCAVGNMPISIDIPEAAFTRVVDAPSLTDMSCEVPACTHSSDFGGVAIIKYAASKKGKCAVHSMTNAVTIREAEIEVEGNSQLQISFSTALASAEFRVQVCSTQVHCAAECHPPKDHIVNYPASHTTLGVQDISATAMSWVQKITGGVGLVVAVAALILIVVLCVSFSRH
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations Yes
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:36)
[INFO]       Auto_mut: Residue number 430 from chain B and a score of 5.640 (valine) selected for  
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 427 from chain B and a score of 5.452 (isoleucine) selected  
                       for automated muatation                                                     (00:03:39)
[INFO]       Auto_mut: Residue number 429 from chain B and a score of 5.276 (isoleucine) selected  
                       for automated muatation                                                     (00:03:39)
[INFO]       Auto_mut: Residue number 428 from chain B and a score of 5.186 (leucine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 431 from chain B and a score of 5.174 (valine) selected for  
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 426 from chain B and a score of 5.051 (leucine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 432 from chain B and a score of 4.404 (leucine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 423 from chain B and a score of 4.333 (valine) selected for  
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 420 from chain B and a score of 4.320 (valine) selected for  
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 421 from chain B and a score of 4.223 (valine) selected for  
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 433 from chain B and a score of 4.024 (cysteine) selected    
                       for automated muatation                                                     (00:03:39)
[INFO]       Auto_mut: Residue number 425 from chain B and a score of 3.856 (alanine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 424 from chain B and a score of 3.681 (alanine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 419 from chain B and a score of 3.614 (leucine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 422 from chain B and a score of 3.572 (alanine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 434 from chain B and a score of 3.513 (valine) selected for  
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 417 from chain B and a score of 2.998 (valine) selected for  
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 418 from chain B and a score of 2.388 (glycine) selected for 
                       automated muatation                                                         (00:03:39)
[INFO]       Auto_mut: Residue number 436 from chain B and a score of 2.333 (phenylalanine)        
                       selected for automated muatation                                            (00:03:39)
[INFO]       Auto_mut: Residue number 87 from chain B and a score of 2.212 (phenylalanine)         
                       selected for automated muatation                                            (00:03:39)
[INFO]       Auto_mut: Mutating residue number 430 from chain B (valine) into glutamic acid        (00:03:39)
[INFO]       Auto_mut: Mutating residue number 427 from chain B (isoleucine) into arginine         (00:03:39)
[INFO]       Auto_mut: Mutating residue number 428 from chain B (leucine) into aspartic acid       (00:03:39)
[INFO]       Auto_mut: Mutating residue number 430 from chain B (valine) into lysine               (00:05:50)
[INFO]       Auto_mut: Mutating residue number 429 from chain B (isoleucine) into glutamic acid    (00:05:53)
[INFO]       Auto_mut: Mutating residue number 428 from chain B (leucine) into arginine            (00:06:02)
[INFO]       Auto_mut: Mutating residue number 429 from chain B (isoleucine) into lysine           (00:08:11)
[INFO]       Auto_mut: Mutating residue number 430 from chain B (valine) into aspartic acid        (00:08:16)
[INFO]       Auto_mut: Mutating residue number 431 from chain B (valine) into glutamic acid        (00:08:21)
[INFO]       Auto_mut: Mutating residue number 430 from chain B (valine) into arginine             (00:10:28)
[INFO]       Auto_mut: Mutating residue number 431 from chain B (valine) into lysine               (00:10:37)
[INFO]       Auto_mut: Mutating residue number 429 from chain B (isoleucine) into aspartic acid    (00:10:38)
[INFO]       Auto_mut: Mutating residue number 427 from chain B (isoleucine) into glutamic acid    (00:12:46)
[INFO]       Auto_mut: Mutating residue number 429 from chain B (isoleucine) into arginine         (00:12:52)
[INFO]       Auto_mut: Mutating residue number 431 from chain B (valine) into aspartic acid        (00:13:11)
[INFO]       Auto_mut: Mutating residue number 427 from chain B (isoleucine) into lysine           (00:15:13)
[INFO]       Auto_mut: Mutating residue number 428 from chain B (leucine) into glutamic acid       (00:15:26)
[INFO]       Auto_mut: Mutating residue number 431 from chain B (valine) into arginine             (00:15:37)
[INFO]       Auto_mut: Mutating residue number 427 from chain B (isoleucine) into aspartic acid    (00:18:02)
[INFO]       Auto_mut: Mutating residue number 428 from chain B (leucine) into lysine              (00:18:04)
[INFO]       Auto_mut: Mutating residue number 426 from chain B (leucine) into glutamic acid       (00:18:21)
[INFO]       Auto_mut: Mutating residue number 426 from chain B (leucine) into lysine              (00:20:37)
[INFO]       Auto_mut: Mutating residue number 423 from chain B (valine) into glutamic acid        (00:20:47)
[INFO]       Auto_mut: Mutating residue number 420 from chain B (valine) into arginine             (00:21:02)
[INFO]       Auto_mut: Mutating residue number 423 from chain B (valine) into lysine               (00:23:24)
[INFO]       Auto_mut: Mutating residue number 426 from chain B (leucine) into aspartic acid       (00:23:31)
[INFO]       Auto_mut: Mutating residue number 421 from chain B (valine) into glutamic acid        (00:23:44)
[INFO]       Auto_mut: Mutating residue number 426 from chain B (leucine) into arginine            (00:26:10)
[INFO]       Auto_mut: Mutating residue number 421 from chain B (valine) into lysine               (00:26:15)
[INFO]       Auto_mut: Mutating residue number 423 from chain B (valine) into aspartic acid        (00:26:20)
[INFO]       Auto_mut: Mutating residue number 423 from chain B (valine) into arginine             (00:28:55)
[INFO]       Auto_mut: Mutating residue number 432 from chain B (leucine) into glutamic acid       (00:28:56)
[INFO]       Auto_mut: Mutating residue number 421 from chain B (valine) into aspartic acid        (00:29:04)
[INFO]       Auto_mut: Mutating residue number 432 from chain B (leucine) into lysine              (00:31:33)
[INFO]       Auto_mut: Mutating residue number 421 from chain B (valine) into arginine             (00:31:38)
[INFO]       Auto_mut: Mutating residue number 420 from chain B (valine) into glutamic acid        (00:31:47)
[INFO]       Auto_mut: Mutating residue number 432 from chain B (leucine) into aspartic acid       (00:34:14)
[INFO]       Auto_mut: Mutating residue number 433 from chain B (cysteine) into glutamic acid      (00:34:18)
[INFO]       Auto_mut: Mutating residue number 420 from chain B (valine) into lysine               (00:34:23)
[INFO]       Auto_mut: Mutating residue number 432 from chain B (leucine) into arginine            (00:36:42)
[INFO]       Auto_mut: Mutating residue number 433 from chain B (cysteine) into lysine             (00:36:43)
[INFO]       Auto_mut: Mutating residue number 420 from chain B (valine) into aspartic acid        (00:37:06)
[INFO]       Auto_mut: Mutating residue number 433 from chain B (cysteine) into aspartic acid      (00:39:07)
[INFO]       Auto_mut: Mutating residue number 424 from chain B (alanine) into lysine              (00:39:17)
[INFO]       Auto_mut: Mutating residue number 422 from chain B (alanine) into glutamic acid       (00:39:26)
[INFO]       Auto_mut: Mutating residue number 433 from chain B (cysteine) into arginine           (00:41:30)
[INFO]       Auto_mut: Mutating residue number 422 from chain B (alanine) into lysine              (00:41:51)
[INFO]       Auto_mut: Mutating residue number 424 from chain B (alanine) into aspartic acid       (00:41:55)
[INFO]       Auto_mut: Mutating residue number 425 from chain B (alanine) into glutamic acid       (00:43:59)
[INFO]       Auto_mut: Mutating residue number 424 from chain B (alanine) into arginine            (00:44:20)
[INFO]       Auto_mut: Mutating residue number 422 from chain B (alanine) into aspartic acid       (00:44:24)
[INFO]       Auto_mut: Mutating residue number 425 from chain B (alanine) into lysine              (00:46:25)
[INFO]       Auto_mut: Mutating residue number 422 from chain B (alanine) into arginine            (00:46:47)
[INFO]       Auto_mut: Mutating residue number 419 from chain B (leucine) into glutamic acid       (00:46:54)
[INFO]       Auto_mut: Mutating residue number 425 from chain B (alanine) into aspartic acid       (00:49:05)
[INFO]       Auto_mut: Mutating residue number 434 from chain B (valine) into glutamic acid        (00:49:14)
[INFO]       Auto_mut: Mutating residue number 419 from chain B (leucine) into lysine              (00:49:24)
[INFO]       Auto_mut: Mutating residue number 425 from chain B (alanine) into arginine            (00:51:27)
[INFO]       Auto_mut: Mutating residue number 434 from chain B (valine) into lysine               (00:51:40)
[INFO]       Auto_mut: Mutating residue number 419 from chain B (leucine) into aspartic acid       (00:52:01)
[INFO]       Auto_mut: Mutating residue number 424 from chain B (alanine) into glutamic acid       (00:54:02)
[INFO]       Auto_mut: Mutating residue number 434 from chain B (valine) into aspartic acid        (00:54:15)
[INFO]       Auto_mut: Mutating residue number 419 from chain B (leucine) into arginine            (00:54:27)
[INFO]       Auto_mut: Mutating residue number 434 from chain B (valine) into arginine             (00:56:27)
[INFO]       Auto_mut: Mutating residue number 418 from chain B (glycine) into aspartic acid       (00:56:38)
[INFO]       Auto_mut: Mutating residue number 87 from chain B (phenylalanine) into lysine         (00:57:01)
[INFO]       Auto_mut: Mutating residue number 417 from chain B (valine) into glutamic acid        (00:58:59)
[INFO]       Auto_mut: Mutating residue number 418 from chain B (glycine) into arginine            (00:59:00)
[INFO]       Auto_mut: Mutating residue number 87 from chain B (phenylalanine) into aspartic acid  
                       Mutating residue number 87 from chain B (phenylalanine) into aspartic acid  (00:59:33)
[INFO]       Auto_mut: Mutating residue number 417 from chain B (valine) into lysine               (01:01:26)
[INFO]       Auto_mut: Mutating residue number 436 from chain B (phenylalanine) into glutamic acid 
                       Mutating residue number 436 from chain B (phenylalanine) into glutamic acid (01:01:30)
[INFO]       Auto_mut: Mutating residue number 87 from chain B (phenylalanine) into arginine       (01:01:58)
[INFO]       Auto_mut: Mutating residue number 436 from chain B (phenylalanine) into lysine        (01:03:55)
[INFO]       Auto_mut: Mutating residue number 417 from chain B (valine) into aspartic acid        (01:03:58)
[INFO]       Auto_mut: Mutating residue number 417 from chain B (valine) into arginine             (01:06:16)
[INFO]       Auto_mut: Mutating residue number 436 from chain B (phenylalanine) into aspartic acid 
                       Mutating residue number 436 from chain B (phenylalanine) into aspartic acid (01:06:19)
[INFO]       Auto_mut: Mutating residue number 436 from chain B (phenylalanine) into arginine      (01:08:38)
[INFO]       Auto_mut: Mutating residue number 418 from chain B (glycine) into glutamic acid       (01:08:38)
[INFO]       Auto_mut: Mutating residue number 87 from chain B (phenylalanine) into glutamic acid  
                       Mutating residue number 87 from chain B (phenylalanine) into glutamic acid  (01:10:55)
[INFO]       Auto_mut: Mutating residue number 418 from chain B (glycine) into lysine              (01:11:06)
[INFO]       Auto_mut: Effect of mutation residue number 430 from chain B (valine) into glutamic   
                       acid: Energy difference: 0.4543 kcal/mol, Difference in average score from  
                       the base case: -0.0178                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 430 from chain B (valine) into lysine:    
                       Energy difference: 0.1984 kcal/mol, Difference in average score from the    
                       base case: -0.0152                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 430 from chain B (valine) into aspartic   
                       acid: Energy difference: 1.0972 kcal/mol, Difference in average score from  
                       the base case: -0.0127                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 430 from chain B (valine) into arginine:  
                       Energy difference: 0.3353 kcal/mol, Difference in average score from the    
                       base case: -0.0168                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 427 from chain B (isoleucine) into        
                       glutamic acid: Energy difference: 0.4704 kcal/mol, Difference in average    
                       score from the base case: -0.0241                                           (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 427 from chain B (isoleucine) into        
                       lysine: Energy difference: 0.1827 kcal/mol, Difference in average score     
                       from the base case: -0.0252                                                 (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 427 from chain B (isoleucine) into        
                       aspartic acid: Energy difference: 0.8949 kcal/mol, Difference in average    
                       score from the base case: -0.0125                                           (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 427 from chain B (isoleucine) into        
                       arginine: Energy difference: 0.3332 kcal/mol, Difference in average score   
                       from the base case: -0.0296                                                 (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 429 from chain B (isoleucine) into        
                       glutamic acid: Energy difference: 1.2296 kcal/mol, Difference in average    
                       score from the base case: -0.0247                                           (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 429 from chain B (isoleucine) into        
                       lysine: Energy difference: 0.6473 kcal/mol, Difference in average score     
                       from the base case: -0.0231                                                 (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 429 from chain B (isoleucine) into        
                       aspartic acid: Energy difference: 1.9825 kcal/mol, Difference in average    
                       score from the base case: -0.0223                                           (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 429 from chain B (isoleucine) into        
                       arginine: Energy difference: 0.9825 kcal/mol, Difference in average score   
                       from the base case: -0.0278                                                 (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 428 from chain B (leucine) into glutamic  
                       acid: Energy difference: 0.5460 kcal/mol, Difference in average score from  
                       the base case: -0.0211                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 428 from chain B (leucine) into lysine:   
                       Energy difference: 0.2010 kcal/mol, Difference in average score from the    
                       base case: -0.0242                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 428 from chain B (leucine) into aspartic  
                       acid: Energy difference: 1.1228 kcal/mol, Difference in average score from  
                       the base case: -0.0191                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 428 from chain B (leucine) into arginine: 
                       Energy difference: 0.0465 kcal/mol, Difference in average score from the    
                       base case: -0.0190                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 431 from chain B (valine) into glutamic   
                       acid: Energy difference: 0.3624 kcal/mol, Difference in average score from  
                       the base case: -0.0241                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 431 from chain B (valine) into lysine:    
                       Energy difference: -0.1440 kcal/mol, Difference in average score from the   
                       base case: -0.0250                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 431 from chain B (valine) into aspartic   
                       acid: Energy difference: 0.8968 kcal/mol, Difference in average score from  
                       the base case: -0.0220                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 431 from chain B (valine) into arginine:  
                       Energy difference: 0.1849 kcal/mol, Difference in average score from the    
                       base case: -0.0309                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 426 from chain B (leucine) into glutamic  
                       acid: Energy difference: 0.5849 kcal/mol, Difference in average score from  
                       the base case: -0.0219                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 426 from chain B (leucine) into lysine:   
                       Energy difference: 0.2582 kcal/mol, Difference in average score from the    
                       base case: -0.0258                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 426 from chain B (leucine) into aspartic  
                       acid: Energy difference: 1.3123 kcal/mol, Difference in average score from  
                       the base case: -0.0201                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 426 from chain B (leucine) into arginine: 
                       Energy difference: 0.2545 kcal/mol, Difference in average score from the    
                       base case: -0.0186                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 432 from chain B (leucine) into glutamic  
                       acid: Energy difference: 1.1889 kcal/mol, Difference in average score from  
                       the base case: -0.0090                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 432 from chain B (leucine) into lysine:   
                       Energy difference: 0.6643 kcal/mol, Difference in average score from the    
                       base case: -0.0113                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 432 from chain B (leucine) into aspartic  
                       acid: Energy difference: 2.0088 kcal/mol, Difference in average score from  
                       the base case: -0.0052                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 432 from chain B (leucine) into arginine: 
                       Energy difference: 0.8506 kcal/mol, Difference in average score from the    
                       base case: -0.0210                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 423 from chain B (valine) into glutamic   
                       acid: Energy difference: -0.0973 kcal/mol, Difference in average score from 
                       the base case: -0.0251                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 423 from chain B (valine) into lysine:    
                       Energy difference: -0.6584 kcal/mol, Difference in average score from the   
                       base case: -0.0212                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 423 from chain B (valine) into aspartic   
                       acid: Energy difference: 0.4657 kcal/mol, Difference in average score from  
                       the base case: -0.0270                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 423 from chain B (valine) into arginine:  
                       Energy difference: -0.1646 kcal/mol, Difference in average score from the   
                       base case: -0.0259                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 420 from chain B (valine) into glutamic   
                       acid: Energy difference: -0.2934 kcal/mol, Difference in average score from 
                       the base case: -0.0299                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 420 from chain B (valine) into lysine:    
                       Energy difference: -0.5419 kcal/mol, Difference in average score from the   
                       base case: -0.0273                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 420 from chain B (valine) into aspartic   
                       acid: Energy difference: 0.0282 kcal/mol, Difference in average score from  
                       the base case: -0.0318                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 420 from chain B (valine) into arginine:  
                       Energy difference: -0.7570 kcal/mol, Difference in average score from the   
                       base case: -0.0281                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 421 from chain B (valine) into glutamic   
                       acid: Energy difference: -0.2715 kcal/mol, Difference in average score from 
                       the base case: -0.0302                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 421 from chain B (valine) into lysine:    
                       Energy difference: -0.3649 kcal/mol, Difference in average score from the   
                       base case: -0.0288                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 421 from chain B (valine) into aspartic   
                       acid: Energy difference: 0.0046 kcal/mol, Difference in average score from  
                       the base case: -0.0297                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 421 from chain B (valine) into arginine:  
                       Energy difference: -0.2975 kcal/mol, Difference in average score from the   
                       base case: -0.0310                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 433 from chain B (cysteine) into glutamic 
                       acid: Energy difference: -0.6180 kcal/mol, Difference in average score from 
                       the base case: -0.0186                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 433 from chain B (cysteine) into lysine:  
                       Energy difference: -1.0668 kcal/mol, Difference in average score from the   
                       base case: -0.0207                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 433 from chain B (cysteine) into aspartic 
                       acid: Energy difference: -0.2308 kcal/mol, Difference in average score from 
                       the base case: -0.0183                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 433 from chain B (cysteine) into          
                       arginine: Energy difference: -1.3464 kcal/mol, Difference in average score  
                       from the base case: -0.0241                                                 (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 425 from chain B (alanine) into glutamic  
                       acid: Energy difference: -0.0769 kcal/mol, Difference in average score from 
                       the base case: -0.0150                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 425 from chain B (alanine) into lysine:   
                       Energy difference: -0.5957 kcal/mol, Difference in average score from the   
                       base case: -0.0184                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 425 from chain B (alanine) into aspartic  
                       acid: Energy difference: 0.4694 kcal/mol, Difference in average score from  
                       the base case: -0.0162                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 425 from chain B (alanine) into arginine: 
                       Energy difference: -0.1998 kcal/mol, Difference in average score from the   
                       base case: -0.0185                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 424 from chain B (alanine) into glutamic  
                       acid: Energy difference: -0.0544 kcal/mol, Difference in average score from 
                       the base case: -0.0160                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 424 from chain B (alanine) into lysine:   
                       Energy difference: -0.4223 kcal/mol, Difference in average score from the   
                       base case: -0.0178                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 424 from chain B (alanine) into aspartic  
                       acid: Energy difference: 0.3816 kcal/mol, Difference in average score from  
                       the base case: -0.0140                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 424 from chain B (alanine) into arginine: 
                       Energy difference: -0.1926 kcal/mol, Difference in average score from the   
                       base case: -0.0231                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 419 from chain B (leucine) into glutamic  
                       acid: Energy difference: 0.1981 kcal/mol, Difference in average score from  
                       the base case: -0.0293                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 419 from chain B (leucine) into lysine:   
                       Energy difference: -0.0304 kcal/mol, Difference in average score from the   
                       base case: -0.0300                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 419 from chain B (leucine) into aspartic  
                       acid: Energy difference: 0.5736 kcal/mol, Difference in average score from  
                       the base case: -0.0262                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 419 from chain B (leucine) into arginine: 
                       Energy difference: -0.0695 kcal/mol, Difference in average score from the   
                       base case: -0.0227                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 422 from chain B (alanine) into glutamic  
                       acid: Energy difference: -0.0597 kcal/mol, Difference in average score from 
                       the base case: -0.0062                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 422 from chain B (alanine) into lysine:   
                       Energy difference: -0.4853 kcal/mol, Difference in average score from the   
                       base case: -0.0057                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 422 from chain B (alanine) into aspartic  
                       acid: Energy difference: 0.2952 kcal/mol, Difference in average score from  
                       the base case: -0.0104                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 422 from chain B (alanine) into arginine: 
                       Energy difference: -0.4098 kcal/mol, Difference in average score from the   
                       base case: -0.0116                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 434 from chain B (valine) into glutamic   
                       acid: Energy difference: -0.3605 kcal/mol, Difference in average score from 
                       the base case: -0.0316                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 434 from chain B (valine) into lysine:    
                       Energy difference: -0.6891 kcal/mol, Difference in average score from the   
                       base case: -0.0308                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 434 from chain B (valine) into aspartic   
                       acid: Energy difference: 0.1511 kcal/mol, Difference in average score from  
                       the base case: -0.0285                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 434 from chain B (valine) into arginine:  
                       Energy difference: -1.0197 kcal/mol, Difference in average score from the   
                       base case: -0.0325                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 417 from chain B (valine) into glutamic   
                       acid: Energy difference: -0.3932 kcal/mol, Difference in average score from 
                       the base case: -0.0267                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 417 from chain B (valine) into lysine:    
                       Energy difference: -0.6065 kcal/mol, Difference in average score from the   
                       base case: -0.0290                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 417 from chain B (valine) into aspartic   
                       acid: Energy difference: -0.0938 kcal/mol, Difference in average score from 
                       the base case: -0.0269                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 417 from chain B (valine) into arginine:  
                       Energy difference: -0.8588 kcal/mol, Difference in average score from the   
                       base case: -0.0369                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 418 from chain B (glycine) into glutamic  
                       acid: Energy difference: -1.1701 kcal/mol, Difference in average score from 
                       the base case: -0.0080                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 418 from chain B (glycine) into lysine:   
                       Energy difference: -0.9612 kcal/mol, Difference in average score from the   
                       base case: -0.0070                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 418 from chain B (glycine) into aspartic  
                       acid: Energy difference: -0.3338 kcal/mol, Difference in average score from 
                       the base case: -0.0082                                                      (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 418 from chain B (glycine) into arginine: 
                       Energy difference: -0.7212 kcal/mol, Difference in average score from the   
                       base case: -0.0084                                                          (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 436 from chain B (phenylalanine) into     
                       glutamic acid: Energy difference: 0.3949 kcal/mol, Difference in average    
                       score from the base case: -0.0243                                           (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 436 from chain B (phenylalanine) into     
                       lysine: Energy difference: -0.0443 kcal/mol, Difference in average score    
                       from the base case: -0.0253                                                 (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 436 from chain B (phenylalanine) into     
                       aspartic acid: Energy difference: 0.9409 kcal/mol, Difference in average    
                       score from the base case: -0.0218                                           (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 436 from chain B (phenylalanine) into     
                       arginine: Energy difference: 0.0711 kcal/mol, Difference in average score   
                       from the base case: -0.0286                                                 (01:13:39)
[INFO]       Auto_mut: Effect of mutation residue number 87 from chain B (phenylalanine) into      
                       glutamic acid: Energy difference: 1.2090 kcal/mol, Difference in average    
                       score from the base case: -0.0284                                           (01:13:40)
[INFO]       Auto_mut: Effect of mutation residue number 87 from chain B (phenylalanine) into      
                       lysine: Energy difference: 0.6777 kcal/mol, Difference in average score     
                       from the base case: -0.0202                                                 (01:13:40)
[INFO]       Auto_mut: Effect of mutation residue number 87 from chain B (phenylalanine) into      
                       aspartic acid: Energy difference: 2.2443 kcal/mol, Difference in average    
                       score from the base case: -0.0181                                           (01:13:40)
[INFO]       Auto_mut: Effect of mutation residue number 87 from chain B (phenylalanine) into      
                       arginine: Energy difference: 1.0457 kcal/mol, Difference in average score   
                       from the base case: -0.0234                                                 (01:13:40)
[INFO]       Main:     Simulation completed successfully.                                          (01:14:05)
Show buried residues

Minimal score value
-3.9407
Maximal score value
5.6397
Average score
-0.5015
Total score value
-220.1576

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Y B -1.4137
2 E B -2.2363
3 H B -0.5781
4 V B 1.5811
5 T B 1.6934
6 V B 1.9586
7 I B 0.0000
8 P B -0.0195
9 N B 0.0000
10 T B -0.0620
11 V B -0.0568
12 G B -0.3713
13 V B 0.0000
14 P B -0.5714
15 Y B -0.2584
16 K B -0.4513
17 T B 0.0000
18 L B -0.0984
19 V B 0.0000
20 N B -1.6744
21 R B -1.7712
22 P B -1.1713
23 G B -0.6629
24 Y B -0.8114
25 S B -0.4393
26 P B -0.6779
27 M B -0.5194
28 V B -0.4427
29 L B 0.0000
30 E B 0.0000
31 M B 0.0000
32 E B -0.6495
33 L B 0.0000
34 L B -0.2626
35 S B -0.3249
36 V B 0.0000
37 T B -0.6138
38 L B 0.0000
39 E B -1.4475
40 P B 0.0000
41 T B -0.7455
42 L B -0.5431
43 S B -0.4308
44 L B -0.0605
45 D B -0.4844
46 Y B 0.0000
47 I B 0.0000
48 T B 0.0000
49 C B 0.0000
50 E B -1.5467
51 Y B -1.4593
52 K B -1.7339
53 T B -0.4409
54 V B 0.1138
55 V B 0.5124
56 P B 0.2052
57 S B 0.0986
58 P B 0.3133
59 Y B 0.8526
60 V B 0.0000
61 K B -0.4764
62 C B 0.4968
63 C B 0.2234
64 G B -0.5895
65 T B -0.8765
66 A B 0.0000
67 E B -2.3340
68 C B -1.7825
69 K B -3.1957
70 D B -3.5602
71 K B -3.1724
72 N B -2.1384
73 L B -1.0881
74 P B -0.8358
75 D B -0.6358
76 Y B -0.5318
77 S B -0.6436
78 C B -1.2252
79 K B -1.7236
80 V B -1.1094
81 F B 0.0000
82 T B -1.0358
83 G B -1.2114
84 V B 0.0000
85 Y B 0.3845
86 P B 0.0000
87 F B 2.2115
88 M B 1.7561
89 W B 1.5219
90 G B 0.5007
91 G B 0.7351
92 A B 1.4802
93 Y B 2.0935
94 C B 0.0000
95 F B 1.9099
96 C B 0.1993
97 D B -1.3949
98 A B -1.3309
99 E B -1.8949
100 N B 0.0000
101 T B 0.0000
102 Q B 0.0000
103 L B 0.0000
104 S B 0.0000
105 E B -0.3579
106 A B 0.0000
107 H B 0.0000
108 V B 0.0000
109 E B -1.8776
110 K B -2.0844
111 S B -2.0643
112 E B -2.7472
113 S B -1.9247
114 C B 0.0000
115 K B -2.6909
116 T B -1.6037
117 E B -1.5327
118 F B -0.6476
119 A B 0.0000
120 S B 0.0000
121 A B 0.0000
122 Y B -0.6435
123 R B -2.0040
124 A B 0.0000
125 H B -1.7919
126 T B -1.1141
127 A B -0.7243
128 S B -0.6455
129 A B -0.4059
130 S B -0.0899
131 A B 0.0000
132 K B -0.7381
133 L B 0.0000
134 R B -1.1645
135 V B 0.0000
136 L B -1.1565
137 Y B 0.0000
138 Q B -2.1921
139 G B -2.1637
140 N B -2.1446
141 N B -2.0704
142 I B 0.0000
143 T B -0.7782
144 V B 0.0000
145 T B -0.1246
146 A B 0.0000
147 Y B 0.3163
148 A B 0.0000
149 N B -1.5345
150 G B -1.4391
151 D B -2.2182
152 H B -1.4382
153 A B -0.8037
154 V B -0.1689
155 T B -1.1892
156 V B -1.2639
157 K B -2.7336
158 D B -2.9247
159 A B 0.0000
160 K B -2.3020
161 F B 0.0000
162 I B -0.0578
163 V B 0.0000
164 G B -0.5412
165 P B -0.8766
166 M B -0.4482
167 S B -0.1825
168 S B -0.1327
169 A B 0.1252
170 W B 0.3074
171 T B -0.2904
172 P B 0.0000
173 F B 0.0000
174 D B -3.0600
175 N B -2.7802
176 K B -2.6621
177 I B 0.0000
178 V B 0.0000
179 V B -0.5815
180 Y B -0.8929
181 K B -2.1507
182 G B -1.7565
183 D B -1.4714
184 V B 0.0000
185 Y B 0.0000
186 N B -1.7298
187 M B -1.5125
188 D B -2.3681
189 Y B 0.0000
190 P B -0.9027
191 P B -0.4631
192 F B 0.2503
193 G B -0.1888
194 A B -0.4246
195 G B 0.0000
196 R B -2.4763
197 P B -1.7749
198 G B -1.4246
199 Q B -1.7916
200 F B 0.0000
201 G B 0.0000
202 D B 0.0000
203 I B 0.0000
204 Q B 0.0000
205 S B 0.0000
206 R B -1.9440
207 T B -1.8917
208 P B -2.2397
209 E B -3.0335
210 S B -2.6638
211 E B -3.3977
212 D B -3.0462
213 V B -1.5278
214 Y B -0.3487
215 A B 0.0000
216 N B -1.1273
217 T B 0.0000
218 Q B -1.2908
219 L B 0.0000
220 V B 0.9446
221 L B 0.0000
222 Q B -1.1604
223 R B -2.1503
224 P B 0.0000
225 A B -0.4453
226 A B 0.0473
227 G B 0.6840
228 T B 0.5346
229 V B 0.8338
230 H B -0.3818
231 V B -0.2603
232 P B -0.0784
233 Y B 0.5589
234 S B 0.1988
235 Q B -0.2132
236 A B -0.8156
237 P B -0.7909
238 S B -0.9032
239 G B 0.0000
240 F B 0.0000
241 K B -1.6614
242 Y B -1.2492
243 W B 0.0000
244 L B -1.5763
245 K B -2.7816
246 E B -3.0021
247 R B -2.1704
248 G B -1.5514
249 A B -1.0710
250 S B 0.0000
251 L B 0.0000
252 Q B -2.1213
253 H B -1.8393
254 T B -0.9890
255 A B -0.7958
256 P B -0.1766
257 F B 0.7089
258 G B -0.4863
259 C B 0.0000
260 Q B -1.5651
261 I B 0.0000
262 A B -1.4312
263 T B -1.5435
264 N B -1.8150
265 P B -1.3475
266 V B 0.0000
267 R B -1.6443
268 A B 0.0000
269 V B -0.6751
270 N B -0.2845
271 C B 0.0000
272 A B 0.2789
273 V B 0.1765
274 G B -0.4711
275 N B -0.2469
276 M B 0.0000
277 P B 0.8649
278 I B 0.0000
279 S B 0.3862
280 I B 0.0000
281 D B -2.2965
282 I B 0.0000
283 P B -2.0191
284 E B -1.9310
285 A B -0.9337
286 A B -0.8507
287 F B -0.7161
288 T B -0.8748
289 R B -1.1016
290 V B 0.3837
291 V B 0.8669
292 D B -1.2346
293 A B 0.0000
294 P B 0.0000
295 S B -0.6888
296 L B 0.0000
297 T B -1.4628
298 D B -2.2768
299 M B -1.8252
300 S B -1.8684
301 C B -1.7951
302 E B -2.1126
303 V B -0.9807
304 P B -0.6416
305 A B -0.6130
306 C B 0.0000
307 T B -1.1840
308 H B -0.9864
309 S B -1.3575
310 S B -0.7128
311 D B -1.6403
312 F B -0.8514
313 G B -0.6087
314 G B 0.0000
315 V B -0.0486
316 A B 0.0000
317 I B -1.3588
318 I B 0.0000
319 K B -3.1953
320 Y B 0.0000
321 A B -2.2246
322 A B -2.0676
323 S B -1.6690
324 K B -3.0652
325 K B -3.6250
326 G B -2.8667
327 K B -3.0917
328 C B 0.0000
329 A B 0.0000
330 V B 0.0000
331 H B -0.8861
332 S B -0.9725
333 M B -0.6557
334 T B -1.1109
335 N B -1.1921
336 A B 0.0000
337 V B 0.0000
338 T B -0.8077
339 I B 0.0000
340 R B -2.3235
341 E B -1.7268
342 A B -1.3256
343 E B -2.5924
344 I B -1.8371
345 E B -2.3897
346 V B 0.0000
347 E B -3.9407
348 G B -2.6700
349 N B -2.8193
350 S B -2.3017
351 Q B -2.7425
352 L B 0.0000
353 Q B -1.6527
354 I B 0.0000
355 S B -0.7571
356 F B 0.0000
357 S B 0.0000
358 T B 0.0000
359 A B 0.1519
360 L B 0.0000
361 A B -0.8061
362 S B -1.2926
363 A B 0.0000
364 E B -2.4099
365 F B 0.0000
366 R B -2.2701
367 V B 0.0000
368 Q B -1.1632
369 V B 0.0000
370 C B 0.0000
371 S B -0.4945
372 T B -0.8940
373 Q B -1.6994
374 V B 0.0000
375 H B -2.2845
376 C B 0.0000
377 A B -1.8143
378 A B -1.6752
379 E B -2.3406
380 C B 0.0000
381 H B -1.8086
382 P B -1.6142
383 P B -2.0505
384 K B -2.8064
385 D B -2.3856
386 H B -1.1332
387 I B 1.0841
388 V B 0.6964
389 N B -0.1599
390 Y B 0.0428
391 P B -0.3736
392 A B -0.4229
393 S B -0.7560
394 H B -0.6890
395 T B -0.2445
396 T B 0.4393
397 L B 0.8335
398 G B 0.4774
399 V B 1.0922
400 Q B -0.9184
401 D B -1.5910
402 I B -0.1357
403 S B -0.3386
404 A B -0.5086
405 T B -0.2333
406 A B 0.3897
407 M B 0.5771
408 S B 0.0770
409 W B 0.8758
410 V B 0.5359
411 Q B -0.8902
412 K B -1.0532
413 I B 0.9675
414 T B 0.5918
415 G B 0.4029
416 G B 1.3613
417 V B 2.9977
418 G B 2.3881
419 L B 3.6136
420 V B 4.3200
421 V B 4.2225
422 A B 3.5719
423 V B 4.3332
424 A B 3.6814
425 A B 3.8559
426 L B 5.0505
427 I B 5.4523
428 L B 5.1863
429 I B 5.2758
430 V B 5.6397
431 V B 5.1737
432 L B 4.4043
433 C B 4.0240
434 V B 3.5134
435 S B 2.0597
436 F B 2.3333
437 S B 0.6077
438 R B -1.1966
439 H B -1.3682
Download PDB file
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Automated mutations analysis

In the automated mutations mode, the server selects aggregation prone resides and each selected residue is mutated to glutamic acid, lysine, aspartic acid and arginine. The table below shows 2 best scored mutants for each mutated residue. Protein variants are ordered according to the mutation effect they had on protein stability (energetic effect) together with the difference in the average per-residue aggregation score between the wild type and the mutant (in the table green values indicate a positive change, grey are neutral, and orange/red mean destabilizing or more aggregation prone mutants).
Summary for all the mutants can be found in this CSV file.

Mutant
Energetic effect
Score comparison
VR417B -0.8588 -0.0369 View CSV PDB
VR434B -1.0197 -0.0325 View CSV PDB
CR433B -1.3464 -0.0241 View CSV PDB
VK434B -0.6891 -0.0308 View CSV PDB
VR420B -0.757 -0.0281 View CSV PDB
CK433B -1.0668 -0.0207 View CSV PDB
VK417B -0.6065 -0.029 View CSV PDB
VK420B -0.5419 -0.0273 View CSV PDB
VK421B -0.3649 -0.0288 View CSV PDB
VR421B -0.2975 -0.031 View CSV PDB
VK423B -0.6584 -0.0212 View CSV PDB
AK425B -0.5957 -0.0184 View CSV PDB
VR423B -0.1646 -0.0259 View CSV PDB
AK424B -0.4223 -0.0178 View CSV PDB
VK431B -0.144 -0.025 View CSV PDB
AR424B -0.1926 -0.0231 View CSV PDB
LK419B -0.0304 -0.03 View CSV PDB
FK436B -0.0443 -0.0253 View CSV PDB
GE418B -1.1701 -0.008 View CSV PDB
AR425B -0.1998 -0.0185 View CSV PDB
LR419B -0.0695 -0.0227 View CSV PDB
AR422B -0.4098 -0.0116 View CSV PDB
GR418B -0.7212 -0.0084 View CSV PDB
AK422B -0.4853 -0.0057 View CSV PDB
LR428B 0.0465 -0.019 View CSV PDB
FR436B 0.0711 -0.0286 View CSV PDB
VR431B 0.1849 -0.0309 View CSV PDB
IK427B 0.1827 -0.0252 View CSV PDB
LK428B 0.201 -0.0242 View CSV PDB
LK426B 0.2582 -0.0258 View CSV PDB
IR427B 0.3332 -0.0296 View CSV PDB
VK430B 0.1984 -0.0152 View CSV PDB
LR426B 0.2545 -0.0186 View CSV PDB
VR430B 0.3353 -0.0168 View CSV PDB
IK429B 0.6473 -0.0231 View CSV PDB
FK87B 0.6777 -0.0202 View CSV PDB
IR429B 0.9825 -0.0278 View CSV PDB
LR432B 0.8506 -0.021 View CSV PDB
FE87B 1.209 -0.0284 View CSV PDB
LK432B 0.6643 -0.0113 View CSV PDB
 

Laboratory of Theory of Biopolymers 2018