| Chain sequence(s) |
L: KGPPPSSPQSACHDGD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 205 | K | L | -1.7949 | |
| 206 | G | L | -0.8254 | |
| 207 | P | L | -0.3592 | |
| 208 | P | L | -0.3703 | |
| 209 | P | L | -0.3092 | |
| 210 | S | L | -0.2941 | |
| 211 | S | L | -0.2680 | |
| 212 | P | L | -0.5112 | |
| 213 | Q | L | -1.1929 | |
| 214 | S | L | -0.4406 | |
| 215 | A | L | 0.0000 | |
| 216 | C | L | 0.4002 | |
| 217 | H | L | -1.1883 | |
| 218 | D | L | -2.0559 | |
| 219 | G | L | -1.1121 | |
| 220 | D | L | -1.8737 |