Project name: query_structure

Status: done

Started: 2026-03-16 23:04:33
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Chain sequence(s) A: DVQLVESGGGSVQAGGSLRLSCAASCKFSHLVFLGWFRQAPGKEREGVAAGLGAYESGYYADSVKGRFTVSLDNAENTVYLQMNSLKPEDTALYYCAALVVLSRDNTEFIAHNYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-3.8059
Maximal score value
1.0558
Average score
-0.8477
Total score value
-105.9679

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.9837
2 V A -1.5634
3 Q A -1.3406
4 L A 0.0000
5 V A 0.5115
6 E A -0.2319
7 S A -0.7646
8 G A -1.2534
9 G A -1.2199
10 G A -0.9362
11 S A -0.7054
12 V A -0.7651
13 Q A -1.6226
14 A A -1.7148
15 G A -1.4097
16 G A -1.0951
17 S A -1.2598
18 L A -1.1523
19 R A -2.1245
20 L A 0.0000
21 S A -0.4203
22 C A 0.0000
23 A A -0.3621
24 A A 0.0000
25 S A -1.1964
26 C A -1.3928
27 K A -2.3784
28 F A 0.0000
29 S A -0.9883
30 H A -0.5934
31 L A 0.0000
32 V A 1.0558
33 F A 0.6878
34 L A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A -0.4945
38 R A -1.3722
39 Q A -2.2246
40 A A -2.0796
41 P A -1.4862
42 G A -2.0142
43 K A -3.4692
44 E A -3.8059
45 R A -3.2748
46 E A -2.0678
47 G A -0.8839
48 V A 0.0000
49 A A 0.0000
50 A A 0.0000
51 G A 0.0000
52 L A 0.2762
53 G A 0.1679
54 A A 0.1768
55 Y A 0.1895
56 E A -1.4058
57 S A -0.6536
58 G A -0.0904
59 Y A 0.1778
60 Y A -0.5631
61 A A 0.0000
62 D A -2.3962
63 S A -1.8366
64 V A 0.0000
65 K A -2.5292
66 G A -1.7720
67 R A -1.5121
68 F A 0.0000
69 T A -0.6946
70 V A 0.1235
71 S A -0.0014
72 L A -0.2392
73 D A -1.5723
74 N A -2.3757
75 A A -1.8608
76 E A -2.6737
77 N A -2.1574
78 T A 0.0000
79 V A 0.0000
80 Y A -0.3711
81 L A 0.0000
82 Q A -1.1920
83 M A 0.0000
84 N A -1.5100
85 S A -1.3231
86 L A 0.0000
87 K A -2.5628
88 P A -1.9729
89 E A -2.3865
90 D A 0.0000
91 T A -1.2009
92 A A 0.0000
93 L A -0.6591
94 Y A 0.0000
95 Y A -0.3295
96 C A 0.0000
97 A A 0.0000
98 A A 0.0000
99 L A 0.2723
100 V A 0.0000
101 V A 0.6921
102 L A 0.1891
103 S A -1.2914
104 R A -2.6723
105 D A -3.3200
106 N A -2.7050
107 T A -2.0168
108 E A -1.8854
109 F A 0.6773
110 I A 0.7578
111 A A 0.5014
112 H A -0.5613
113 N A -1.1664
114 Y A -0.7465
115 W A -0.0054
116 G A -0.2475
117 Q A -1.1343
118 G A -0.6387
119 T A 0.0000
120 Q A -1.4960
121 V A 0.0000
122 T A -0.9971
123 V A 0.0000
124 S A -1.1705
125 S A -0.8805
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Laboratory of Theory of Biopolymers 2018