| Chain sequence(s) |
A: DVQLVESGGGSVQAGGSLRLSCAASCKFSHLVFLGWFRQAPGKEREGVAAGLGAYESGYYADSVKGRFTVSLDNAENTVYLQMNSLKPEDTALYYCAALVVLSRDNTEFIAHNYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9837 | |
| 2 | V | A | -1.5634 | |
| 3 | Q | A | -1.3406 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.5115 | |
| 6 | E | A | -0.2319 | |
| 7 | S | A | -0.7646 | |
| 8 | G | A | -1.2534 | |
| 9 | G | A | -1.2199 | |
| 10 | G | A | -0.9362 | |
| 11 | S | A | -0.7054 | |
| 12 | V | A | -0.7651 | |
| 13 | Q | A | -1.6226 | |
| 14 | A | A | -1.7148 | |
| 15 | G | A | -1.4097 | |
| 16 | G | A | -1.0951 | |
| 17 | S | A | -1.2598 | |
| 18 | L | A | -1.1523 | |
| 19 | R | A | -2.1245 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4203 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.3621 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.1964 | |
| 26 | C | A | -1.3928 | |
| 27 | K | A | -2.3784 | |
| 28 | F | A | 0.0000 | |
| 29 | S | A | -0.9883 | |
| 30 | H | A | -0.5934 | |
| 31 | L | A | 0.0000 | |
| 32 | V | A | 1.0558 | |
| 33 | F | A | 0.6878 | |
| 34 | L | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | -0.4945 | |
| 38 | R | A | -1.3722 | |
| 39 | Q | A | -2.2246 | |
| 40 | A | A | -2.0796 | |
| 41 | P | A | -1.4862 | |
| 42 | G | A | -2.0142 | |
| 43 | K | A | -3.4692 | |
| 44 | E | A | -3.8059 | |
| 45 | R | A | -3.2748 | |
| 46 | E | A | -2.0678 | |
| 47 | G | A | -0.8839 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | G | A | 0.0000 | |
| 52 | L | A | 0.2762 | |
| 53 | G | A | 0.1679 | |
| 54 | A | A | 0.1768 | |
| 55 | Y | A | 0.1895 | |
| 56 | E | A | -1.4058 | |
| 57 | S | A | -0.6536 | |
| 58 | G | A | -0.0904 | |
| 59 | Y | A | 0.1778 | |
| 60 | Y | A | -0.5631 | |
| 61 | A | A | 0.0000 | |
| 62 | D | A | -2.3962 | |
| 63 | S | A | -1.8366 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5292 | |
| 66 | G | A | -1.7720 | |
| 67 | R | A | -1.5121 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.6946 | |
| 70 | V | A | 0.1235 | |
| 71 | S | A | -0.0014 | |
| 72 | L | A | -0.2392 | |
| 73 | D | A | -1.5723 | |
| 74 | N | A | -2.3757 | |
| 75 | A | A | -1.8608 | |
| 76 | E | A | -2.6737 | |
| 77 | N | A | -2.1574 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.3711 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.1920 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.5100 | |
| 85 | S | A | -1.3231 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.5628 | |
| 88 | P | A | -1.9729 | |
| 89 | E | A | -2.3865 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -1.2009 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | -0.6591 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.3295 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | L | A | 0.2723 | |
| 100 | V | A | 0.0000 | |
| 101 | V | A | 0.6921 | |
| 102 | L | A | 0.1891 | |
| 103 | S | A | -1.2914 | |
| 104 | R | A | -2.6723 | |
| 105 | D | A | -3.3200 | |
| 106 | N | A | -2.7050 | |
| 107 | T | A | -2.0168 | |
| 108 | E | A | -1.8854 | |
| 109 | F | A | 0.6773 | |
| 110 | I | A | 0.7578 | |
| 111 | A | A | 0.5014 | |
| 112 | H | A | -0.5613 | |
| 113 | N | A | -1.1664 | |
| 114 | Y | A | -0.7465 | |
| 115 | W | A | -0.0054 | |
| 116 | G | A | -0.2475 | |
| 117 | Q | A | -1.1343 | |
| 118 | G | A | -0.6387 | |
| 119 | T | A | 0.0000 | |
| 120 | Q | A | -1.4960 | |
| 121 | V | A | 0.0000 | |
| 122 | T | A | -0.9971 | |
| 123 | V | A | 0.0000 | |
| 124 | S | A | -1.1705 | |
| 125 | S | A | -0.8805 |