| Chain sequence(s) |
A: DTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLENGGGGKYVCSNKLVLATGLRNKPLKETQGLFGAIAGFTEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAMDGVTNKVNSIIDKMNTQYEAIGCEYNNSERCMKQIEDKIEEIESKVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISGVKLESVGTYQRRKRGSGATNFSLLKQAGDVEENPG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:16)
[INFO] Main: Simulation completed successfully. (00:08:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.2562 | |
| 2 | T | A | -1.1918 | |
| 3 | I | A | 0.0000 | |
| 4 | C | A | -0.2267 | |
| 5 | I | A | 0.0000 | |
| 6 | G | A | 0.0000 | |
| 7 | Y | A | 0.0000 | |
| 8 | H | A | -0.6839 | |
| 9 | A | A | 0.0000 | |
| 10 | N | A | -1.4237 | |
| 11 | N | A | -1.9763 | |
| 12 | S | A | -1.3932 | |
| 13 | T | A | -1.2015 | |
| 14 | D | A | -1.6157 | |
| 15 | T | A | -1.4973 | |
| 16 | V | A | 0.0000 | |
| 17 | D | A | -1.4637 | |
| 18 | T | A | 0.0000 | |
| 19 | V | A | 0.9714 | |
| 20 | L | A | 1.0450 | |
| 21 | E | A | -1.3927 | |
| 22 | K | A | -2.4961 | |
| 23 | N | A | -2.6557 | |
| 24 | V | A | 0.0000 | |
| 25 | T | A | -1.6268 | |
| 26 | V | A | 0.0000 | |
| 27 | T | A | 0.0000 | |
| 28 | H | A | -0.6223 | |
| 29 | S | A | -0.4977 | |
| 30 | V | A | -0.2369 | |
| 31 | N | A | -1.5629 | |
| 32 | L | A | -0.8136 | |
| 33 | L | A | -1.9357 | |
| 34 | E | A | -2.8447 | |
| 35 | N | A | -2.6076 | |
| 36 | G | A | -1.8414 | |
| 37 | G | A | -2.0137 | |
| 38 | G | A | -1.7382 | |
| 39 | G | A | -1.3970 | |
| 40 | K | A | -1.6877 | |
| 41 | Y | A | -0.9425 | |
| 42 | V | A | 0.0000 | |
| 43 | C | A | -0.2796 | |
| 44 | S | A | 0.0000 | |
| 45 | N | A | -1.7538 | |
| 46 | K | A | -2.0542 | |
| 47 | L | A | 0.0000 | |
| 48 | V | A | -0.8420 | |
| 49 | L | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | T | A | -0.0566 | |
| 52 | G | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | R | A | -1.3927 | |
| 55 | N | A | 0.0000 | |
| 56 | K | A | -2.5482 | |
| 57 | P | A | -2.0289 | |
| 58 | L | A | -1.7832 | |
| 59 | K | A | -3.0046 | |
| 60 | E | A | -2.8002 | |
| 61 | T | A | -2.0708 | |
| 62 | Q | A | -1.5436 | |
| 63 | G | A | -0.2304 | |
| 64 | L | A | 1.7233 | |
| 65 | F | A | 2.4047 | |
| 66 | G | A | 1.2203 | |
| 67 | A | A | 1.1945 | |
| 68 | I | A | 2.1732 | |
| 69 | A | A | 0.5363 | |
| 70 | G | A | -0.8525 | |
| 71 | F | A | -0.1933 | |
| 72 | T | A | -1.0922 | |
| 73 | E | A | -2.1703 | |
| 74 | G | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | W | A | 0.0000 | |
| 77 | Q | A | -1.4508 | |
| 78 | G | A | -0.6919 | |
| 79 | M | A | 0.0000 | |
| 80 | V | A | 0.5793 | |
| 81 | D | A | -1.1372 | |
| 82 | G | A | 0.0000 | |
| 83 | W | A | 0.0000 | |
| 84 | Y | A | 0.0000 | |
| 85 | G | A | 0.0000 | |
| 86 | Y | A | 0.0000 | |
| 87 | H | A | -0.0805 | |
| 88 | H | A | -0.7526 | |
| 89 | S | A | -1.5320 | |
| 90 | N | A | -2.6095 | |
| 91 | E | A | -3.2614 | |
| 92 | Q | A | -2.7616 | |
| 93 | G | A | -1.9380 | |
| 94 | S | A | -1.1130 | |
| 95 | G | A | -0.0986 | |
| 96 | Y | A | 0.4687 | |
| 97 | A | A | -0.3651 | |
| 98 | A | A | 0.0000 | |
| 99 | D | A | -1.9839 | |
| 100 | K | A | -3.2268 | |
| 101 | E | A | -3.5074 | |
| 102 | S | A | -2.4128 | |
| 103 | T | A | 0.0000 | |
| 104 | Q | A | -3.2570 | |
| 105 | K | A | -3.3751 | |
| 106 | A | A | 0.0000 | |
| 107 | M | A | -1.5199 | |
| 108 | D | A | -2.5181 | |
| 109 | G | A | -1.9281 | |
| 110 | V | A | 0.0000 | |
| 111 | T | A | -1.6449 | |
| 112 | N | A | -2.1467 | |
| 113 | K | A | -1.5586 | |
| 114 | V | A | -1.1417 | |
| 115 | N | A | -2.2260 | |
| 116 | S | A | -2.0149 | |
| 117 | I | A | 0.0000 | |
| 118 | I | A | -1.5115 | |
| 119 | D | A | -3.0126 | |
| 120 | K | A | -2.8949 | |
| 121 | M | A | -1.8846 | |
| 122 | N | A | -2.3970 | |
| 123 | T | A | -2.0830 | |
| 124 | Q | A | -1.7085 | |
| 125 | Y | A | -1.3657 | |
| 126 | E | A | -1.7887 | |
| 127 | A | A | -0.7073 | |
| 128 | I | A | -0.2817 | |
| 129 | G | A | -0.6130 | |
| 130 | C | A | -0.3275 | |
| 131 | E | A | -1.3639 | |
| 132 | Y | A | -0.4201 | |
| 133 | N | A | -1.8924 | |
| 134 | N | A | -2.6430 | |
| 135 | S | A | -2.3867 | |
| 136 | E | A | -3.4011 | |
| 137 | R | A | -3.2515 | |
| 138 | C | A | -1.5067 | |
| 139 | M | A | -1.9737 | |
| 140 | K | A | -3.6557 | |
| 141 | Q | A | -2.9052 | |
| 142 | I | A | -1.2341 | |
| 143 | E | A | -2.5295 | |
| 144 | D | A | -3.5092 | |
| 145 | K | A | -2.6143 | |
| 146 | I | A | -1.0158 | |
| 147 | E | A | -2.0763 | |
| 148 | E | A | -2.4679 | |
| 149 | I | A | -0.5148 | |
| 150 | E | A | -0.8549 | |
| 151 | S | A | -1.0298 | |
| 152 | K | A | -0.7419 | |
| 153 | V | A | 0.6139 | |
| 154 | W | A | 0.3461 | |
| 155 | T | A | 0.0000 | |
| 156 | Y | A | 0.9686 | |
| 157 | N | A | 0.1926 | |
| 158 | A | A | 0.0000 | |
| 159 | E | A | -0.0035 | |
| 160 | L | A | 0.8470 | |
| 161 | L | A | 0.7259 | |
| 162 | V | A | 0.0000 | |
| 163 | L | A | 0.3131 | |
| 164 | M | A | 0.5115 | |
| 165 | E | A | -0.7080 | |
| 166 | N | A | 0.0000 | |
| 167 | E | A | -1.4421 | |
| 168 | R | A | -2.5150 | |
| 169 | T | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | D | A | -2.9285 | |
| 172 | F | A | -1.2904 | |
| 173 | H | A | 0.0000 | |
| 174 | D | A | -2.4636 | |
| 175 | S | A | -1.5754 | |
| 176 | N | A | -1.5656 | |
| 177 | V | A | 0.0000 | |
| 178 | K | A | -1.7047 | |
| 179 | N | A | -2.2609 | |
| 180 | L | A | 0.0000 | |
| 181 | Y | A | 0.0000 | |
| 182 | D | A | -1.5174 | |
| 183 | K | A | -1.9301 | |
| 184 | V | A | 0.0000 | |
| 185 | R | A | -1.6761 | |
| 186 | L | A | -0.2111 | |
| 187 | Q | A | -1.1348 | |
| 188 | L | A | 0.0000 | |
| 189 | R | A | -2.5307 | |
| 190 | D | A | -2.6946 | |
| 191 | N | A | 0.0000 | |
| 192 | A | A | 0.0000 | |
| 193 | K | A | -2.5772 | |
| 194 | E | A | -2.2934 | |
| 195 | L | A | -0.8360 | |
| 196 | G | A | -1.0167 | |
| 197 | N | A | -1.1566 | |
| 198 | G | A | 0.0000 | |
| 199 | C | A | -0.8188 | |
| 200 | F | A | 0.0000 | |
| 201 | E | A | -1.7526 | |
| 202 | F | A | 0.0000 | |
| 203 | Y | A | -1.6772 | |
| 204 | H | A | 0.0000 | |
| 205 | K | A | -2.5380 | |
| 206 | C | A | 0.0000 | |
| 207 | D | A | -3.3754 | |
| 208 | N | A | -3.2753 | |
| 209 | E | A | -3.2390 | |
| 210 | C | A | 0.0000 | |
| 211 | M | A | 0.0000 | |
| 212 | E | A | -3.4453 | |
| 213 | S | A | -2.6579 | |
| 214 | V | A | 0.0000 | |
| 215 | R | A | -2.2638 | |
| 216 | N | A | -2.3489 | |
| 217 | G | A | -1.8386 | |
| 218 | T | A | -1.4817 | |
| 219 | Y | A | 0.0000 | |
| 220 | D | A | -2.1880 | |
| 221 | Y | A | -1.6699 | |
| 222 | P | A | -1.6868 | |
| 223 | Q | A | -2.2584 | |
| 224 | Y | A | -2.2463 | |
| 225 | S | A | -2.6207 | |
| 226 | E | A | -3.1399 | |
| 227 | E | A | -3.2869 | |
| 228 | A | A | 0.0000 | |
| 229 | R | A | -2.6671 | |
| 230 | L | A | -1.6261 | |
| 231 | K | A | -2.0980 | |
| 232 | R | A | -1.6322 | |
| 233 | E | A | -0.9037 | |
| 234 | E | A | -1.4143 | |
| 235 | I | A | 0.6946 | |
| 236 | S | A | -0.0195 | |
| 237 | G | A | -0.1240 | |
| 238 | V | A | 0.5036 | |
| 239 | K | A | -1.3575 | |
| 240 | L | A | -0.1292 | |
| 241 | E | A | -1.1507 | |
| 242 | S | A | -0.2739 | |
| 243 | V | A | 1.3173 | |
| 244 | G | A | 0.2240 | |
| 245 | T | A | 0.1871 | |
| 246 | Y | A | 0.0508 | |
| 247 | Q | A | -2.2870 | |
| 248 | R | A | -3.6753 | |
| 249 | R | A | -4.3099 | |
| 250 | K | A | -4.3055 | |
| 251 | R | A | -3.7547 | |
| 252 | G | A | -2.1897 | |
| 253 | S | A | -1.2391 | |
| 254 | G | A | -0.8927 | |
| 255 | A | A | -0.5394 | |
| 256 | T | A | -0.3498 | |
| 257 | N | A | -0.2547 | |
| 258 | F | A | 1.7483 | |
| 259 | S | A | 1.3661 | |
| 260 | L | A | 1.9649 | |
| 261 | L | A | 1.3183 | |
| 262 | K | A | -1.1948 | |
| 263 | Q | A | -1.7367 | |
| 264 | A | A | -1.2707 | |
| 265 | G | A | -1.5992 | |
| 266 | D | A | -1.9310 | |
| 267 | V | A | -0.6736 | |
| 268 | E | A | -2.6816 | |
| 269 | E | A | -3.1197 | |
| 270 | N | A | -2.6430 | |
| 271 | P | A | -1.7067 | |
| 272 | G | A | -0.8869 |