Project name: uuu

Status: done

Started: 2024-07-08 03:28:16
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Chain sequence(s) A: KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:33)
Show buried residues

Minimal score value
-3.6857
Maximal score value
1.8254
Average score
-1.2628
Total score value
-224.7771

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.6441
2 K A -2.2041
3 V A -1.7776
4 V A -1.1643
5 L A 0.0000
6 G A 0.0000
7 K A -2.4277
8 K A -3.5981
9 G A -3.0582
10 D A -3.3741
11 T A -2.4566
12 V A -1.5650
13 E A -1.8764
14 L A 0.0000
15 T A -0.8183
16 C A 0.0000
17 T A -0.6319
18 A A -2.0008
19 S A -1.6999
20 Q A -2.7739
21 K A -3.2881
22 K A -3.6857
23 S A -2.8662
24 I A -2.0455
25 Q A -2.1001
26 F A 0.0000
27 H A -1.3778
28 W A 0.0000
29 K A -1.3819
30 N A -1.4290
31 S A -1.5958
32 N A -1.8669
33 Q A -1.6560
34 I A -0.3932
35 K A -1.1718
36 I A 0.0000
37 L A 0.0000
38 G A 0.0000
39 N A -0.8968
40 Q A -1.1544
41 G A -0.8247
42 S A -0.1906
43 F A 1.0509
44 L A -0.1573
45 T A -0.4891
46 K A -1.3688
47 G A -0.9977
48 P A -1.1367
49 S A -1.4167
50 K A -2.2202
51 L A 0.0000
52 N A -2.0623
53 D A -2.6339
54 R A -2.1291
55 A A 0.0000
56 D A -1.7745
57 S A 0.0000
58 R A -2.5140
59 R A -2.7124
60 S A -2.0359
61 L A -1.9851
62 W A -2.3323
63 D A -3.3566
64 Q A -3.0162
65 G A 0.0000
66 N A -1.5248
67 F A 0.0000
68 P A 0.0000
69 L A 0.0000
70 I A 0.0000
71 I A 0.0000
72 K A -2.8513
73 N A -3.0270
74 L A 0.0000
75 K A -2.4429
76 I A -1.7121
77 E A -1.4280
78 D A 0.0000
79 S A 0.0000
80 D A -1.0643
81 T A -1.3591
82 Y A 0.0000
83 I A -1.9726
84 C A 0.0000
85 E A -3.0301
86 V A 0.0000
87 E A -3.2375
88 D A -3.5432
89 Q A -3.3724
90 K A -3.6636
91 E A -2.9062
92 E A -3.2030
93 V A 0.0000
94 Q A -1.4975
95 L A 0.0000
96 L A 0.0000
97 V A 0.0000
98 F A 0.0000
99 G A 0.0000
100 L A -1.3699
101 T A -1.0987
102 A A -1.5725
103 N A -1.9359
104 S A -1.8296
105 D A -2.4199
106 T A -1.8461
107 H A -1.1327
108 L A 0.3797
109 L A 1.3600
110 Q A -0.0210
111 G A -1.0813
112 Q A -1.7704
113 S A -1.0266
114 L A 0.0000
115 T A -0.8542
116 L A 0.0000
117 T A -1.4630
118 L A 0.0000
119 E A -2.4159
120 S A -1.6372
121 P A 0.0000
122 P A -0.7720
123 G A -0.7352
124 S A -0.8160
125 S A -1.0086
126 P A 0.0000
127 S A -0.6222
128 V A 0.0000
129 Q A -1.4247
130 C A 0.0000
131 R A -3.2703
132 S A 0.0000
133 P A -2.1686
134 R A -3.3947
135 G A -2.6781
136 K A -3.2165
137 N A -2.7644
138 I A -1.3033
139 Q A -1.7995
140 G A -1.4099
141 G A 0.0000
142 K A -2.3973
143 T A -1.4966
144 L A -0.8697
145 S A -0.5965
146 V A -0.4021
147 S A -1.2150
148 Q A -1.9864
149 L A 0.0000
150 E A -2.0187
151 L A 0.2244
152 Q A -1.3707
153 D A 0.0000
154 S A -0.2664
155 G A -1.2040
156 T A -1.5959
157 W A 0.0000
158 T A -1.9351
159 C A 0.0000
160 T A -1.1937
161 V A 0.0000
162 L A -1.0449
163 Q A -1.4937
164 N A -2.5437
165 Q A -2.5504
166 K A -2.5904
167 K A -2.3736
168 V A -1.4110
169 E A -1.7028
170 F A -1.3588
171 K A -2.3257
172 I A -1.5664
173 D A -2.1599
174 I A 0.0000
175 V A 0.1178
176 V A 0.0000
177 L A 1.8254
178 A A 0.9629
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Laboratory of Theory of Biopolymers 2018