Project name: query_structure

Status: done

Started: 2026-03-16 21:27:20
Settings
Chain sequence(s) A: MKGTFLICLILIAGFSFKSTQAGSICLEPKVVGPCTAYFPRFYFDSETGKCTPFIYGGCEGNGNNFETLHACRAICRA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-2.5458
Maximal score value
5.2363
Average score
0.1835
Total score value
14.3117

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3048
2 K A -0.9259
3 G A 0.0547
4 T A 1.4449
5 F A 3.3927
6 L A 4.1553
7 I A 4.8943
8 C A 4.7478
9 L A 5.2363
10 I A 5.1316
11 L A 4.7137
12 I A 4.2326
13 A A 2.5972
14 G A 1.9860
15 F A 2.6655
16 S A 1.1828
17 F A 1.4856
18 K A -0.8345
19 S A -0.8733
20 T A -1.0069
21 Q A -1.5529
22 A A -0.6767
23 G A -0.7173
24 S A -0.2646
25 I A 0.1997
26 C A 0.0000
27 L A 0.7276
28 E A -0.3381
29 P A -0.7365
30 K A -1.0829
31 V A -0.1931
32 V A 1.2662
33 G A -0.0572
34 P A -0.0990
35 C A 0.3645
36 T A 0.8124
37 A A 1.2470
38 Y A 2.1369
39 F A 1.7109
40 P A 0.3759
41 R A -0.1151
42 F A -0.7764
43 Y A 0.0000
44 F A -1.0604
45 D A -1.5131
46 S A -1.2608
47 E A -2.1481
48 T A -1.6860
49 G A -1.8335
50 K A -2.5458
51 C A -1.4450
52 T A -0.6372
53 P A -0.5595
54 F A 0.0000
55 I A 1.4953
56 Y A 1.0903
57 G A 0.0000
58 G A 0.5894
59 C A -0.2949
60 E A -1.5398
61 G A -1.0490
62 N A -1.0895
63 G A -0.5639
64 N A 0.0000
65 N A -0.7953
66 F A 0.0000
67 E A -1.8370
68 T A -1.3231
69 L A -0.9585
70 H A -1.4452
71 A A -1.2296
72 C A 0.0000
73 R A -2.5445
74 A A -1.2575
75 I A -0.6395
76 C A 0.0000
77 R A -2.4483
78 A A -1.9748
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Laboratory of Theory of Biopolymers 2018