| Chain sequence(s) |
H: QVQLLESGGGLVQPGGSLRLSCAASGFTFSTAAMSWVRQAPGKGLEWVSGISGSGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARELSYLYSGYYFDYWGQGTLVTVSS
L: QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNDVSWYQQLPGTAPKLLIYKNYNRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCSAWDQRQFDVVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3958 | |
| 2 | V | H | -0.7318 | |
| 3 | Q | H | -0.6288 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.8314 | |
| 6 | E | H | 0.2101 | |
| 7 | S | H | -0.2675 | |
| 8 | G | H | -0.6365 | |
| 9 | G | H | 0.1713 | |
| 11 | G | H | 0.6808 | |
| 12 | L | H | 1.3302 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.3725 | |
| 15 | P | H | -1.4619 | |
| 16 | G | H | -1.5844 | |
| 17 | G | H | -1.3616 | |
| 18 | S | H | -1.4486 | |
| 19 | L | H | -1.0096 | |
| 20 | R | H | -1.7297 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3425 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1368 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6710 | |
| 27 | G | H | -0.8937 | |
| 28 | F | H | -0.3294 | |
| 29 | T | H | -0.2228 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.6280 | |
| 36 | T | H | -0.2559 | |
| 37 | A | H | 0.0000 | |
| 38 | A | H | -0.0381 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6166 | |
| 45 | A | H | -1.0293 | |
| 46 | P | H | -0.8119 | |
| 47 | G | H | -1.4514 | |
| 48 | K | H | -2.2590 | |
| 49 | G | H | -1.5159 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9437 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | -0.1917 | |
| 58 | G | H | -0.4806 | |
| 59 | S | H | -0.6482 | |
| 62 | G | H | -0.6500 | |
| 63 | S | H | -0.4479 | |
| 64 | S | H | -0.0176 | |
| 65 | T | H | 0.4998 | |
| 66 | Y | H | 1.0965 | |
| 67 | Y | H | -0.0862 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.4337 | |
| 70 | S | H | -1.6894 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3583 | |
| 74 | G | H | -1.8052 | |
| 75 | R | H | -1.8537 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7880 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4513 | |
| 80 | R | H | -0.9846 | |
| 81 | D | H | -1.5222 | |
| 82 | N | H | -1.7669 | |
| 83 | S | H | -1.5950 | |
| 84 | K | H | -2.3413 | |
| 85 | N | H | -1.6653 | |
| 86 | T | H | -0.9817 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4459 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3984 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -2.1273 | |
| 93 | S | H | -1.5816 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2324 | |
| 96 | A | H | -1.6506 | |
| 97 | E | H | -2.1555 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3819 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7649 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.0149 | |
| 107 | E | H | 0.0000 | |
| 108 | L | H | 0.8071 | |
| 109 | S | H | 1.3029 | |
| 110 | Y | H | 2.4668 | |
| 111 | L | H | 2.8123 | |
| 111A | Y | H | 2.2537 | |
| 112A | S | H | 1.2782 | |
| 112 | G | H | 0.9413 | |
| 113 | Y | H | 0.7925 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.0236 | |
| 117 | Y | H | 0.2289 | |
| 118 | W | H | -0.0565 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.7971 | |
| 121 | G | H | -0.0655 | |
| 122 | T | H | 0.4763 | |
| 123 | L | H | 1.5261 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2881 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7300 | |
| 128 | S | H | -0.5612 | |
| 1 | Q | L | -0.8150 | |
| 2 | S | L | -0.1310 | |
| 3 | V | L | 1.1545 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | 0.1288 | |
| 6 | Q | L | -0.3742 | |
| 7 | P | L | -0.6159 | |
| 8 | P | L | -0.8504 | |
| 9 | S | L | -0.8761 | |
| 11 | A | L | -0.5338 | |
| 12 | S | L | -0.3173 | |
| 13 | G | L | 0.0000 | |
| 14 | T | L | -0.2384 | |
| 15 | P | L | -0.9462 | |
| 16 | G | L | -1.6993 | |
| 17 | Q | L | -2.3410 | |
| 18 | R | L | -2.5541 | |
| 19 | V | L | -1.1304 | |
| 20 | T | L | -0.4899 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.3694 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.1849 | |
| 25 | G | L | 0.0383 | |
| 26 | S | L | -0.3502 | |
| 27 | S | L | -0.8922 | |
| 28 | S | L | -1.1063 | |
| 29 | N | L | 0.0000 | |
| 30 | I | L | 0.0000 | |
| 35 | G | L | -0.8519 | |
| 36 | S | L | -0.7666 | |
| 37 | N | L | -0.7998 | |
| 38 | D | L | -0.6458 | |
| 39 | V | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | L | L | -0.6169 | |
| 46 | P | L | -0.4735 | |
| 47 | G | L | -0.6437 | |
| 48 | T | L | -0.6209 | |
| 49 | A | L | -0.5820 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.8952 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.2643 | |
| 56 | K | L | -0.5071 | |
| 57 | N | L | -0.4268 | |
| 65 | Y | L | 0.3717 | |
| 66 | N | L | -0.5697 | |
| 67 | R | L | -1.3459 | |
| 68 | P | L | -0.7029 | |
| 69 | S | L | -0.7522 | |
| 70 | G | L | -0.9478 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.4439 | |
| 74 | D | L | -2.2654 | |
| 75 | R | L | -1.6050 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6451 | |
| 78 | G | L | -0.1058 | |
| 79 | S | L | -0.3615 | |
| 80 | K | L | -0.9734 | |
| 83 | S | L | -0.8629 | |
| 84 | G | L | -0.9028 | |
| 85 | T | L | -0.7397 | |
| 86 | S | L | -0.6953 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.3079 | |
| 89 | L | L | 0.0000 | |
| 90 | A | L | -0.5612 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.8234 | |
| 93 | G | L | -1.7109 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.5502 | |
| 96 | S | L | -1.3290 | |
| 97 | E | L | -2.1737 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.2967 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.1808 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | S | L | 0.0000 | |
| 106 | A | L | 0.0000 | |
| 107 | W | L | -0.1874 | |
| 108 | D | L | 0.0000 | |
| 109 | Q | L | -1.5685 | |
| 110 | R | L | -2.2944 | |
| 113 | Q | L | -1.5149 | |
| 114 | F | L | 0.6915 | |
| 115 | D | L | -0.1547 | |
| 116 | V | L | 0.0000 | |
| 117 | V | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7323 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4284 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.3520 | |
| 126 | V | L | 0.1679 | |
| 127 | L | L | 1.4301 |