| Chain sequence(s) |
A: DEEEKKKLLERIKKYVDEKGPPEGVDREKYIEELFKELMKQKEIYDHIEEHGGQKSVG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:23)
[INFO] Main: Simulation completed successfully. (00:02:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -4.2740 | |
| 2 | E | A | -4.9787 | |
| 3 | E | A | -5.1447 | |
| 4 | E | A | -5.2846 | |
| 5 | K | A | -4.7260 | |
| 6 | K | A | -4.9207 | |
| 7 | K | A | -4.1591 | |
| 8 | L | A | 0.0000 | |
| 9 | L | A | -3.0750 | |
| 10 | E | A | -3.9962 | |
| 11 | R | A | -3.8474 | |
| 12 | I | A | 0.0000 | |
| 13 | K | A | -3.6621 | |
| 14 | K | A | -4.0981 | |
| 15 | Y | A | -2.6695 | |
| 16 | V | A | 0.0000 | |
| 17 | D | A | -4.0873 | |
| 18 | E | A | -3.8403 | |
| 19 | K | A | -3.2404 | |
| 20 | G | A | -2.7847 | |
| 21 | P | A | -2.3204 | |
| 22 | P | A | -1.5283 | |
| 23 | E | A | -2.2016 | |
| 24 | G | A | -1.4337 | |
| 25 | V | A | -1.4783 | |
| 26 | D | A | -3.1435 | |
| 27 | R | A | -3.8353 | |
| 28 | E | A | -4.1693 | |
| 29 | K | A | -4.2037 | |
| 30 | Y | A | -3.1852 | |
| 31 | I | A | 0.0000 | |
| 32 | E | A | -4.3068 | |
| 33 | E | A | -4.1921 | |
| 34 | L | A | -2.5716 | |
| 35 | F | A | -2.9000 | |
| 36 | K | A | -3.4466 | |
| 37 | E | A | -3.5776 | |
| 38 | L | A | -2.0232 | |
| 39 | M | A | -1.9540 | |
| 40 | K | A | -2.8367 | |
| 41 | Q | A | -1.9645 | |
| 42 | K | A | -2.2047 | |
| 43 | E | A | -2.2332 | |
| 44 | I | A | -0.0758 | |
| 45 | Y | A | -0.3876 | |
| 46 | D | A | -2.8131 | |
| 47 | H | A | -2.0797 | |
| 48 | I | A | -0.7915 | |
| 49 | E | A | -2.9209 | |
| 50 | E | A | -3.3979 | |
| 51 | H | A | -2.7444 | |
| 52 | G | A | -2.6742 | |
| 53 | G | A | -2.3937 | |
| 54 | Q | A | -2.1335 | |
| 55 | K | A | -2.0794 | |
| 56 | S | A | -0.6008 | |
| 57 | V | A | 0.8565 | |
| 58 | G | A | 0.1525 |