Project name: dcb881fd80b7055

Status: done

Started: 2024-12-19 09:02:24
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Chain sequence(s) Q: VLTQPPSVSGAPGQRVTISCSGSSSNIGGYHVQWYQQLPGTAPKLLIYESNKRPSGISDRFSASQFGTSASLTITGLQSEDEADYYCQSYDSSVSAQVFGGGTRLT
O: VQLQESGPGLVKPSETLSLTCAVSGASFSSFWWDWIRQPPGRGLEWIGDINGNSGSTNYNPSLKSRVTISKDASKSQFSLKLTSVTAADTAVYYCALQSVTYYEDDSGHYETEMAKFWGQGVLVTV
input PDB
Selected Chain(s) O,Q
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:45)
Show buried residues

Minimal score value
-2.7221
Maximal score value
1.7202
Average score
-0.5645
Total score value
-130.9726

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V O -0.1276
3 Q O -1.2436
4 L O -1.0503
5 Q O -1.6229
6 E O 0.0000
7 S O -0.5687
8 G O -0.3461
9 P O 0.0374
11 G O 0.4019
12 L O 1.1135
13 V O 0.0000
14 K O -1.9011
15 P O -1.4138
16 S O -1.5109
17 E O -2.2098
18 T O -1.6479
19 L O 0.0000
20 S O -1.2491
21 L O 0.0000
22 T O -0.8313
23 C O 0.0000
24 A O -0.9525
25 V O -0.8103
26 S O -0.9627
27 G O -0.6196
28 A O 0.0000
29 S O -0.2892
30 F O 0.0000
35 S O -0.6012
36 S O 0.0664
37 F O 0.1624
38 W O 0.0000
39 W O 0.0000
40 D O 0.0000
41 W O 0.0000
42 I O 0.0000
43 R O 0.0000
44 Q O 0.0000
45 P O -0.8283
46 P O -1.0003
47 G O -1.6192
48 R O -2.3888
49 G O -1.5135
50 L O 0.0000
51 E O -0.8259
52 W O 0.0000
53 I O 0.0000
54 G O 0.0000
55 D O 0.0000
56 I O 0.0000
57 N O 0.0000
58 G O 0.0000
59 N O -1.2780
62 S O -0.9808
63 G O -1.1827
64 S O -0.9110
65 T O -0.4108
66 N O -0.7441
67 Y O -0.7699
68 N O -0.7281
69 P O -0.7408
70 S O -0.6969
71 L O -1.0832
72 K O -2.0376
74 S O -1.3424
75 R O -1.5114
76 V O 0.0000
77 T O -1.1795
78 I O 0.0000
79 S O -1.1017
80 K O -1.7801
81 D O -2.2811
82 A O -1.6997
83 S O -1.6588
84 K O -2.2627
85 S O -1.6074
86 Q O -1.6384
87 F O 0.0000
88 S O -1.0852
89 L O 0.0000
90 K O -1.9605
91 L O 0.0000
92 T O -1.2349
93 S O -1.1350
94 V O 0.0000
95 T O -0.7266
96 A O -0.2630
97 A O -0.1637
98 D O -0.5131
99 T O 0.1992
100 A O 0.0000
101 V O 0.7256
102 Y O 0.0000
103 Y O 0.0000
104 C O 0.0000
105 A O 0.0000
106 L O 0.0000
107 Q O -0.2157
108 S O 0.0000
109 V O 0.3118
110 T O 0.0000
111 Y O 0.2624
111A Y O -0.0087
111B E O -1.5400
111C D O -1.5198
111D D O -2.0542
112E S O -1.0973
112D G O -0.7256
112C H O -0.4207
112B Y O 0.0331
112A E O -1.0075
112 T O -0.8880
113 E O -1.2017
114 M O -0.1014
115 A O 0.0000
116 K O -0.8430
117 F O -0.3347
118 W O -0.6933
119 G O 0.0000
120 Q O -1.5716
121 G O 0.0000
122 V O 0.5065
123 L O 1.7202
124 V O 0.0000
125 T O 0.6798
126 V O -0.1098
3 V Q 1.7153
4 L Q 0.0000
5 T Q 0.1175
6 Q Q -0.2764
7 P Q -0.6386
8 P Q -0.8132
9 S Q -0.9885
11 V Q -0.6262
12 S Q -0.5851
13 G Q -1.1858
14 A Q -1.1978
15 P Q -1.4217
16 G Q -1.7372
17 Q Q -2.4731
18 R Q -2.7221
19 V Q 0.0000
20 T Q -0.6818
21 I Q 0.0000
22 S Q -0.2817
23 C Q 0.0000
24 S Q 0.0468
25 G Q 0.0049
26 S Q -0.3780
27 S Q -0.6987
28 S Q -0.3325
29 N Q 0.0000
30 I Q 0.0000
35 G Q -0.5115
36 G Q -0.5501
37 Y Q 0.0763
38 H Q -0.7089
39 V Q 0.0000
40 Q Q -0.7599
41 W Q 0.0000
42 Y Q 0.0000
43 Q Q 0.0000
44 Q Q 0.0000
45 L Q -0.1472
46 P Q -0.3069
47 G Q -0.6583
48 T Q -0.6179
49 A Q -0.7008
50 P Q 0.0000
51 K Q -1.4635
52 L Q 0.0000
53 L Q 0.0000
54 I Q 0.0000
55 Y Q 0.0000
56 E Q -1.8586
57 S Q -1.2916
65 N Q -2.3932
66 K Q -2.5479
67 R Q -2.2676
68 P Q 0.0000
69 S Q -0.9886
70 G Q -0.8977
71 I Q -0.8749
72 S Q -1.2659
74 D Q -2.2351
75 R Q -1.7057
76 F Q 0.0000
77 S Q -1.2225
78 A Q -0.9540
79 S Q -0.5045
80 Q Q 0.0867
83 F Q 1.4304
84 G Q 0.1391
85 T Q -0.1625
86 S Q 0.0637
87 A Q 0.0000
88 S Q 0.0007
89 L Q 0.0000
90 T Q -0.6489
91 I Q 0.0000
92 T Q -1.7788
93 G Q -1.7509
94 L Q 0.0000
95 Q Q -1.8758
96 S Q -1.7863
97 E Q -2.4931
98 D Q 0.0000
99 E Q -2.1769
100 A Q 0.0000
101 D Q -1.1276
102 Y Q 0.0000
103 Y Q 0.0000
104 C Q 0.0000
105 Q Q 0.0000
106 S Q 0.0000
107 Y Q 0.4665
108 D Q 0.0000
109 S Q -0.0236
110 S Q -0.0259
113 V Q 0.6157
114 S Q -0.0079
115 A Q 0.0000
116 Q Q 0.0736
117 V Q 0.5438
118 F Q 0.0000
119 G Q 0.0000
120 G Q -0.7486
121 G Q -1.1628
122 T Q 0.0000
123 R Q -2.1638
124 L Q 0.0000
125 T Q -0.9925
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Laboratory of Theory of Biopolymers 2018