Project name: IVIVKGH12

Status: done

Started: 2026-02-13 09:38:57
Settings
Chain sequence(s) A: IVIVKGH
C: IVIVKGH
B: IVIVKGH
E: IVIVKGH
D: IVIVKGH
G: IVIVKGH
F: IVIVKGH
I: IVIVKGH
H: IVIVKGH
K: IVIVKGH
J: IVIVKGH
L: IVIVKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:37)
Show buried residues

Minimal score value
-3.0771
Maximal score value
4.6748
Average score
0.0674
Total score value
5.6579

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 4.5081
2 V A 3.6529
3 I A 2.0369
4 V A -0.3741
5 K A -2.7213
6 G A -3.0771
7 H A -2.6363
1 I B 4.2933
2 V B 3.6085
3 I B 1.8081
4 V B -0.5127
5 K B -2.8536
6 G B -2.9884
7 H B -2.6988
1 I C 4.5060
2 V C 3.5702
3 I C 1.7173
4 V C -0.5652
5 K C -2.8605
6 G C -3.0005
7 H C -2.6498
1 I D 4.5588
2 V D 3.5966
3 I D 1.7067
4 V D -0.5893
5 K D -2.8375
6 G D -2.9149
7 H D -2.6624
1 I E 4.6050
2 V E 3.8240
3 I E 1.7550
4 V E -0.5853
5 K E -2.7894
6 G E -2.8360
7 H E -2.5874
1 I F 4.5514
2 V F 0.0000
3 I F 1.5943
4 V F -0.6407
5 K F -2.7336
6 G F -2.6758
7 H F -2.5527
1 I G 4.5252
2 V G 3.8044
3 I G 1.4657
4 V G -0.6671
5 K G -2.8308
6 G G -2.7833
7 H G -2.5899
1 I H 4.5431
2 V H 3.5511
3 I H 1.5139
4 V H -0.6384
5 K H -2.7347
6 G H -2.7417
7 H H -2.5299
1 I I 4.5049
2 V I 3.4855
3 I I 1.4271
4 V I -0.6574
5 K I -2.8423
6 G I -2.7288
7 H I -2.5612
1 I J 4.5808
2 V J 3.9352
3 I J 1.7070
4 V J -0.5854
5 K J -2.7445
6 G J -2.9215
7 H J -2.6154
1 I K 4.6748
2 V K 3.7819
3 I K 2.0082
4 V K -0.4546
5 K K -2.7820
6 G K -3.0691
7 H K -2.5909
1 I L 4.3909
2 V L 0.0000
3 I L 2.1716
4 V L -0.3932
5 K L -2.7660
6 G L -3.0221
7 H L -2.7130
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Laboratory of Theory of Biopolymers 2018