| Chain sequence(s) |
A: IVIVKGH
C: IVIVKGH B: IVIVKGH E: IVIVKGH D: IVIVKGH G: IVIVKGH F: IVIVKGH I: IVIVKGH H: IVIVKGH K: IVIVKGH J: IVIVKGH L: IVIVKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:34)
[INFO] Main: Simulation completed successfully. (00:02:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.5081 | |
| 2 | V | A | 3.6529 | |
| 3 | I | A | 2.0369 | |
| 4 | V | A | -0.3741 | |
| 5 | K | A | -2.7213 | |
| 6 | G | A | -3.0771 | |
| 7 | H | A | -2.6363 | |
| 1 | I | B | 4.2933 | |
| 2 | V | B | 3.6085 | |
| 3 | I | B | 1.8081 | |
| 4 | V | B | -0.5127 | |
| 5 | K | B | -2.8536 | |
| 6 | G | B | -2.9884 | |
| 7 | H | B | -2.6988 | |
| 1 | I | C | 4.5060 | |
| 2 | V | C | 3.5702 | |
| 3 | I | C | 1.7173 | |
| 4 | V | C | -0.5652 | |
| 5 | K | C | -2.8605 | |
| 6 | G | C | -3.0005 | |
| 7 | H | C | -2.6498 | |
| 1 | I | D | 4.5588 | |
| 2 | V | D | 3.5966 | |
| 3 | I | D | 1.7067 | |
| 4 | V | D | -0.5893 | |
| 5 | K | D | -2.8375 | |
| 6 | G | D | -2.9149 | |
| 7 | H | D | -2.6624 | |
| 1 | I | E | 4.6050 | |
| 2 | V | E | 3.8240 | |
| 3 | I | E | 1.7550 | |
| 4 | V | E | -0.5853 | |
| 5 | K | E | -2.7894 | |
| 6 | G | E | -2.8360 | |
| 7 | H | E | -2.5874 | |
| 1 | I | F | 4.5514 | |
| 2 | V | F | 0.0000 | |
| 3 | I | F | 1.5943 | |
| 4 | V | F | -0.6407 | |
| 5 | K | F | -2.7336 | |
| 6 | G | F | -2.6758 | |
| 7 | H | F | -2.5527 | |
| 1 | I | G | 4.5252 | |
| 2 | V | G | 3.8044 | |
| 3 | I | G | 1.4657 | |
| 4 | V | G | -0.6671 | |
| 5 | K | G | -2.8308 | |
| 6 | G | G | -2.7833 | |
| 7 | H | G | -2.5899 | |
| 1 | I | H | 4.5431 | |
| 2 | V | H | 3.5511 | |
| 3 | I | H | 1.5139 | |
| 4 | V | H | -0.6384 | |
| 5 | K | H | -2.7347 | |
| 6 | G | H | -2.7417 | |
| 7 | H | H | -2.5299 | |
| 1 | I | I | 4.5049 | |
| 2 | V | I | 3.4855 | |
| 3 | I | I | 1.4271 | |
| 4 | V | I | -0.6574 | |
| 5 | K | I | -2.8423 | |
| 6 | G | I | -2.7288 | |
| 7 | H | I | -2.5612 | |
| 1 | I | J | 4.5808 | |
| 2 | V | J | 3.9352 | |
| 3 | I | J | 1.7070 | |
| 4 | V | J | -0.5854 | |
| 5 | K | J | -2.7445 | |
| 6 | G | J | -2.9215 | |
| 7 | H | J | -2.6154 | |
| 1 | I | K | 4.6748 | |
| 2 | V | K | 3.7819 | |
| 3 | I | K | 2.0082 | |
| 4 | V | K | -0.4546 | |
| 5 | K | K | -2.7820 | |
| 6 | G | K | -3.0691 | |
| 7 | H | K | -2.5909 | |
| 1 | I | L | 4.3909 | |
| 2 | V | L | 0.0000 | |
| 3 | I | L | 2.1716 | |
| 4 | V | L | -0.3932 | |
| 5 | K | L | -2.7660 | |
| 6 | G | L | -3.0221 | |
| 7 | H | L | -2.7130 |