Project name: query_structure

Status: done

Started: 2026-03-17 01:19:37
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAGYWYVQYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYDDWEWSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-2.6998
Maximal score value
1.9717
Average score
-0.4846
Total score value
-43.6165

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.9077
2 S A 0.9383
3 S A 0.8051
4 V A 0.0554
5 P A 0.0000
6 T A -1.6835
7 K A -2.6579
8 L A 0.0000
9 E A -1.9389
10 V A 0.0837
11 V A 1.5272
12 A A 0.8898
13 A A 0.2989
14 T A -0.2009
15 P A -0.8083
16 T A -0.5395
17 S A -0.3237
18 L A 0.0000
19 L A 0.7334
20 I A 0.0000
21 S A -0.7937
22 W A 0.0000
23 D A -2.3831
24 A A -0.5312
25 G A 0.6214
26 Y A 1.9717
27 W A 1.9053
28 Y A 1.5901
29 V A 0.0000
30 Q A -0.8329
31 Y A -0.0744
32 Y A 0.0000
33 R A -0.6221
34 I A 0.0000
35 T A 0.0000
36 Y A -0.3980
37 G A 0.0000
38 E A -1.6056
39 T A -1.5079
40 G A -1.3536
41 G A -1.4389
42 N A -1.5212
43 S A -0.8762
44 P A -0.4106
45 V A 0.2659
46 Q A -1.1989
47 E A -1.8004
48 F A -0.7165
49 T A -0.1644
50 V A -0.0047
51 P A -0.3623
52 G A -0.0482
53 S A -0.2266
54 S A -0.4616
55 S A -0.5917
56 T A -0.2608
57 A A 0.0000
58 T A 0.3038
59 I A 0.0000
60 S A -0.4763
61 G A -0.6890
62 L A 0.0000
63 S A -0.9530
64 P A -1.1092
65 G A -1.2677
66 V A -1.3478
67 D A -2.6817
68 Y A 0.0000
69 T A -0.9213
70 I A 0.0000
71 T A -0.1701
72 V A 0.0000
73 Y A -0.2017
74 A A 0.0000
75 Y A -0.8193
76 Y A -0.7860
77 D A -2.3499
78 D A -2.4780
79 W A -1.0255
80 E A -1.8006
81 W A -0.5322
82 S A -0.3423
83 P A -0.2989
84 I A 0.0375
85 S A -0.5386
86 I A -0.7162
87 N A -1.9145
88 Y A -1.7115
89 R A -2.6998
90 T A -1.3824
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Laboratory of Theory of Biopolymers 2018