| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAGYWYVQYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYDDWEWSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.9077 | |
| 2 | S | A | 0.9383 | |
| 3 | S | A | 0.8051 | |
| 4 | V | A | 0.0554 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6835 | |
| 7 | K | A | -2.6579 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9389 | |
| 10 | V | A | 0.0837 | |
| 11 | V | A | 1.5272 | |
| 12 | A | A | 0.8898 | |
| 13 | A | A | 0.2989 | |
| 14 | T | A | -0.2009 | |
| 15 | P | A | -0.8083 | |
| 16 | T | A | -0.5395 | |
| 17 | S | A | -0.3237 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7334 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7937 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.3831 | |
| 24 | A | A | -0.5312 | |
| 25 | G | A | 0.6214 | |
| 26 | Y | A | 1.9717 | |
| 27 | W | A | 1.9053 | |
| 28 | Y | A | 1.5901 | |
| 29 | V | A | 0.0000 | |
| 30 | Q | A | -0.8329 | |
| 31 | Y | A | -0.0744 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.6221 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.3980 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.6056 | |
| 39 | T | A | -1.5079 | |
| 40 | G | A | -1.3536 | |
| 41 | G | A | -1.4389 | |
| 42 | N | A | -1.5212 | |
| 43 | S | A | -0.8762 | |
| 44 | P | A | -0.4106 | |
| 45 | V | A | 0.2659 | |
| 46 | Q | A | -1.1989 | |
| 47 | E | A | -1.8004 | |
| 48 | F | A | -0.7165 | |
| 49 | T | A | -0.1644 | |
| 50 | V | A | -0.0047 | |
| 51 | P | A | -0.3623 | |
| 52 | G | A | -0.0482 | |
| 53 | S | A | -0.2266 | |
| 54 | S | A | -0.4616 | |
| 55 | S | A | -0.5917 | |
| 56 | T | A | -0.2608 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.3038 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4763 | |
| 61 | G | A | -0.6890 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.9530 | |
| 64 | P | A | -1.1092 | |
| 65 | G | A | -1.2677 | |
| 66 | V | A | -1.3478 | |
| 67 | D | A | -2.6817 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.9213 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1701 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.2017 | |
| 74 | A | A | 0.0000 | |
| 75 | Y | A | -0.8193 | |
| 76 | Y | A | -0.7860 | |
| 77 | D | A | -2.3499 | |
| 78 | D | A | -2.4780 | |
| 79 | W | A | -1.0255 | |
| 80 | E | A | -1.8006 | |
| 81 | W | A | -0.5322 | |
| 82 | S | A | -0.3423 | |
| 83 | P | A | -0.2989 | |
| 84 | I | A | 0.0375 | |
| 85 | S | A | -0.5386 | |
| 86 | I | A | -0.7162 | |
| 87 | N | A | -1.9145 | |
| 88 | Y | A | -1.7115 | |
| 89 | R | A | -2.6998 | |
| 90 | T | A | -1.3824 |