| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASGDWRYYNWAWFRQAPGKGRELVASVGPGRATGWTASDPRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAASRSGEVSSPSSFSYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.1790 | |
| 2 | V | C | -1.3681 | |
| 3 | Q | C | -1.3981 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.5558 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.6478 | |
| 8 | G | C | -0.9215 | |
| 9 | G | C | -0.7163 | |
| 10 | G | C | 0.1705 | |
| 11 | L | C | 0.9802 | |
| 12 | V | C | -0.0578 | |
| 13 | Q | C | -1.3474 | |
| 14 | P | C | -1.7015 | |
| 15 | G | C | -1.5129 | |
| 16 | G | C | -1.1541 | |
| 17 | S | C | -1.2133 | |
| 18 | L | C | -1.0739 | |
| 19 | R | C | -2.1068 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.4663 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.3128 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -1.1486 | |
| 26 | G | C | -1.6401 | |
| 27 | D | C | -1.5301 | |
| 28 | W | C | -1.1056 | |
| 29 | R | C | -1.6622 | |
| 30 | Y | C | -0.1735 | |
| 31 | Y | C | 0.0000 | |
| 32 | N | C | -0.9762 | |
| 33 | W | C | 0.0000 | |
| 34 | A | C | 0.0000 | |
| 35 | W | C | 0.0000 | |
| 36 | F | C | 0.0000 | |
| 37 | R | C | -1.2616 | |
| 38 | Q | C | -1.7898 | |
| 39 | A | C | -1.7390 | |
| 40 | P | C | -1.1664 | |
| 41 | G | C | -1.6550 | |
| 42 | K | C | -2.7400 | |
| 43 | G | C | -2.3137 | |
| 44 | R | C | -2.2937 | |
| 45 | E | C | -2.2415 | |
| 46 | L | C | -0.7872 | |
| 47 | V | C | 0.0000 | |
| 48 | A | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | V | C | 0.0000 | |
| 51 | G | C | 0.0000 | |
| 52 | P | C | -0.8063 | |
| 53 | G | C | -1.1091 | |
| 54 | R | C | -2.0009 | |
| 55 | A | C | -0.9477 | |
| 56 | T | C | -0.7361 | |
| 57 | G | C | -0.4206 | |
| 58 | W | C | 0.5916 | |
| 59 | T | C | 0.1494 | |
| 60 | A | C | -0.0781 | |
| 61 | S | C | -0.5292 | |
| 62 | D | C | -0.5337 | |
| 63 | P | C | -0.6564 | |
| 64 | R | C | -0.8833 | |
| 65 | F | C | 0.0000 | |
| 66 | T | C | -0.5911 | |
| 67 | I | C | 0.0000 | |
| 68 | S | C | -0.3354 | |
| 69 | R | C | -1.0654 | |
| 70 | D | C | -1.4935 | |
| 71 | N | C | -1.8166 | |
| 72 | A | C | -1.4092 | |
| 73 | K | C | -2.3975 | |
| 74 | R | C | -2.2799 | |
| 75 | M | C | -1.0016 | |
| 76 | V | C | 0.0000 | |
| 77 | Y | C | -0.6289 | |
| 78 | L | C | 0.0000 | |
| 79 | Q | C | -1.5138 | |
| 80 | M | C | 0.0000 | |
| 81 | N | C | -1.7415 | |
| 82 | S | C | -1.3352 | |
| 83 | L | C | 0.0000 | |
| 84 | R | C | -2.4921 | |
| 85 | A | C | -1.8423 | |
| 86 | E | C | -2.2888 | |
| 87 | D | C | 0.0000 | |
| 88 | T | C | -0.9023 | |
| 89 | A | C | 0.0000 | |
| 90 | V | C | -0.4462 | |
| 91 | Y | C | 0.0000 | |
| 92 | Y | C | -0.3065 | |
| 93 | C | C | 0.0000 | |
| 94 | A | C | 0.0000 | |
| 95 | A | C | 0.0000 | |
| 96 | S | C | 0.0000 | |
| 97 | R | C | -2.3838 | |
| 98 | S | C | -1.6951 | |
| 99 | G | C | -1.7094 | |
| 100 | E | C | -2.1399 | |
| 101 | V | C | -0.5167 | |
| 102 | S | C | -0.5675 | |
| 103 | S | C | -0.6991 | |
| 104 | P | C | -0.7967 | |
| 105 | S | C | -0.5005 | |
| 106 | S | C | -0.9404 | |
| 107 | F | C | 0.0000 | |
| 108 | S | C | -0.4046 | |
| 109 | Y | C | -0.3242 | |
| 110 | W | C | 0.0681 | |
| 111 | G | C | -0.2616 | |
| 112 | Q | C | -0.9324 | |
| 113 | G | C | 0.0000 | |
| 114 | T | C | -0.7265 | |
| 115 | Q | C | -0.9710 | |
| 116 | V | C | 0.0000 | |
| 117 | T | C | -0.3129 | |
| 118 | V | C | 0.0000 | |
| 119 | S | C | -0.7673 | |
| 120 | S | C | -0.5629 |