| Chain sequence(s) |
A: GIVEQCCKNICSLKQLEKYCNNEDKELCGSHLVDRLPDKCGERGFFYDRHK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:02)
[INFO] Main: Simulation completed successfully. (00:02:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0041 | |
| 2 | I | A | -1.0738 | |
| 3 | V | A | -1.5849 | |
| 4 | E | A | -2.8652 | |
| 5 | Q | A | -2.1514 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -2.0220 | |
| 8 | K | A | -2.5540 | |
| 9 | N | A | -1.0622 | |
| 10 | I | A | 1.5470 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | 0.0000 | |
| 13 | L | A | -2.1975 | |
| 14 | K | A | -3.5638 | |
| 15 | Q | A | -2.6349 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -2.9014 | |
| 18 | K | A | -2.6102 | |
| 19 | Y | A | -1.3629 | |
| 20 | C | A | -1.3359 | |
| 21 | N | A | -1.9945 | |
| 22 | N | A | -2.9103 | |
| 23 | E | A | -3.4181 | |
| 24 | D | A | -3.3417 | |
| 25 | K | A | -3.5574 | |
| 26 | E | A | -3.3093 | |
| 27 | L | A | 0.0000 | |
| 28 | C | A | -1.5492 | |
| 29 | G | A | 0.0000 | |
| 30 | S | A | -1.8217 | |
| 31 | H | A | -2.3583 | |
| 32 | L | A | 0.0000 | |
| 33 | V | A | -1.7140 | |
| 34 | D | A | -3.3296 | |
| 35 | R | A | -3.6566 | |
| 36 | L | A | 0.0000 | |
| 37 | P | A | -2.6755 | |
| 38 | D | A | -3.8782 | |
| 39 | K | A | -3.5486 | |
| 40 | C | A | 0.0000 | |
| 41 | G | A | -2.9326 | |
| 42 | E | A | -3.3620 | |
| 43 | R | A | -3.2802 | |
| 44 | G | A | -1.9204 | |
| 45 | F | A | -0.1358 | |
| 46 | F | A | 2.0621 | |
| 47 | Y | A | 0.6645 | |
| 48 | D | A | -1.2451 | |
| 49 | R | A | -2.9376 | |
| 50 | H | A | -2.9478 | |
| 51 | K | A | -2.8838 |