Project name: dd38dd5084477cd

Status: done

Started: 2025-12-30 12:51:15
Settings
Chain sequence(s) A: GIVEQCCKNICSLKQLEKYCNNEDKELCGSHLVDRLPDKCGERGFFYDRHK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:03)
Show buried residues

Minimal score value
-3.8782
Maximal score value
2.0621
Average score
-1.7914
Total score value
-91.3589

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.0041
2 I A -1.0738
3 V A -1.5849
4 E A -2.8652
5 Q A -2.1514
6 C A 0.0000
7 C A -2.0220
8 K A -2.5540
9 N A -1.0622
10 I A 1.5470
11 C A 0.0000
12 S A 0.0000
13 L A -2.1975
14 K A -3.5638
15 Q A -2.6349
16 L A 0.0000
17 E A -2.9014
18 K A -2.6102
19 Y A -1.3629
20 C A -1.3359
21 N A -1.9945
22 N A -2.9103
23 E A -3.4181
24 D A -3.3417
25 K A -3.5574
26 E A -3.3093
27 L A 0.0000
28 C A -1.5492
29 G A 0.0000
30 S A -1.8217
31 H A -2.3583
32 L A 0.0000
33 V A -1.7140
34 D A -3.3296
35 R A -3.6566
36 L A 0.0000
37 P A -2.6755
38 D A -3.8782
39 K A -3.5486
40 C A 0.0000
41 G A -2.9326
42 E A -3.3620
43 R A -3.2802
44 G A -1.9204
45 F A -0.1358
46 F A 2.0621
47 Y A 0.6645
48 D A -1.2451
49 R A -2.9376
50 H A -2.9478
51 K A -2.8838
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018