Project name: dd43d22ce10f3ac

Status: done

Started: 2026-04-12 13:17:10
Settings
Chain sequence(s) A: FYGHKYF
C: FYGHKYF
B: FYGHKYF
E: FYGHKYF
D: FYGHKYF
G: FYGHKYF
F: FYGHKYF
I: FYGHKYF
H: FYGHKYF
K: FYGHKYF
J: FYGHKYF
L: FYGHKYF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:32)
Show buried residues

Minimal score value
-1.2674
Maximal score value
4.0712
Average score
1.3009
Total score value
109.2764

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 3.9715
2 Y A 0.0000
3 G A 0.8260
4 H A 0.0000
5 K A -0.2441
6 Y A 1.6498
7 F A 3.3364
1 F B 4.0095
2 Y B 0.0000
3 G B 0.7916
4 H B 0.0000
5 K B -0.3668
6 Y B 1.6461
7 F B 3.4824
1 F C 3.9561
2 Y C 2.4917
3 G C 0.8463
4 H C 0.0000
5 K C -0.2846
6 Y C 0.0000
7 F C 3.3587
1 F D 3.9075
2 Y D 0.0000
3 G D 0.0000
4 H D 0.0000
5 K D -0.2449
6 Y D 1.4793
7 F D 3.3624
1 F E 3.6246
2 Y E 2.0780
3 G E 0.5011
4 H E 0.0000
5 K E -0.4828
6 Y E 1.1575
7 F E 2.8135
1 F F 2.9036
2 Y F 1.4929
3 G F -0.0713
4 H F -1.1922
5 K F -1.2674
6 Y F 0.7172
7 F F 2.3808
1 F G 2.9538
2 Y G 1.6214
3 G G -0.0092
4 H G -1.1288
5 K G -1.0993
6 Y G 1.1127
7 F G 2.4781
1 F H 3.6007
2 Y H 2.3546
3 G H 0.0000
4 H H 0.0000
5 K H -0.3744
6 Y H 1.4813
7 F H 3.2919
1 F I 4.0034
2 Y I 2.6333
3 G I 0.8583
4 H I 0.0000
5 K I -0.3470
6 Y I 1.6364
7 F I 3.5049
1 F J 4.0712
2 Y J 0.0000
3 G J 0.8250
4 H J 0.0000
5 K J -0.4706
6 Y J 1.4803
7 F J 3.3673
1 F K 3.5119
2 Y K 2.7153
3 G K 0.6244
4 H K -0.9844
5 K K -1.0183
6 Y K 1.3981
7 F K 2.8610
1 F L 3.4888
2 Y L 2.6738
3 G L 0.5593
4 H L -1.0074
5 K L -0.8212
6 Y L 1.7293
7 F L 3.0701
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Laboratory of Theory of Biopolymers 2018