| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHEGADVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPVGHPLPAAPPPSPLYVPPPPGSPYAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9471 | |
| 2 | L | A | 1.9755 | |
| 3 | P | A | 0.7107 | |
| 4 | P | A | 0.1177 | |
| 5 | T | A | 0.2183 | |
| 6 | T | A | 0.1558 | |
| 7 | P | A | 0.2573 | |
| 8 | V | A | 1.2521 | |
| 9 | A | A | 0.0593 | |
| 10 | K | A | -1.1074 | |
| 11 | V | A | -0.3214 | |
| 12 | Q | A | -1.4781 | |
| 13 | S | A | -1.6325 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6386 | |
| 16 | E | A | -2.5696 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4321 | |
| 20 | P | A | 0.0367 | |
| 21 | T | A | 0.1063 | |
| 22 | S | A | -0.1764 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0720 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2431 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7624 | |
| 31 | R | A | -2.7046 | |
| 32 | L | A | -0.8363 | |
| 33 | L | A | 1.0850 | |
| 34 | T | A | 1.3504 | |
| 35 | V | A | 1.8915 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7281 | |
| 40 | R | A | -1.9787 | |
| 41 | D | A | -0.7005 | |
| 42 | I | A | 1.3551 | |
| 43 | V | A | 2.2827 | |
| 44 | V | A | 1.5907 | |
| 45 | N | A | -0.5857 | |
| 46 | G | A | -0.3787 | |
| 47 | K | A | -0.1146 | |
| 48 | V | A | 2.2524 | |
| 49 | L | A | 2.5755 | |
| 50 | V | A | 1.5178 | |
| 51 | P | A | 0.3992 | |
| 52 | K | A | -0.6604 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1853 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4477 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3295 | |
| 70 | K | A | -1.8647 | |
| 71 | F | A | -0.9203 | |
| 72 | A | A | -0.5972 | |
| 73 | L | A | -0.9357 | |
| 74 | P | A | -1.2563 | |
| 75 | Q | A | -2.4755 | |
| 76 | K | A | -3.0940 | |
| 77 | D | A | -2.9834 | |
| 78 | F | A | -1.6504 | |
| 79 | Y | A | -1.9269 | |
| 80 | D | A | -2.7415 | |
| 81 | P | A | -2.3444 | |
| 82 | E | A | -3.0442 | |
| 83 | K | A | -3.3965 | |
| 84 | E | A | -2.4565 | |
| 85 | R | A | -1.2807 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.5285 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0117 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.4038 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7814 | |
| 99 | G | A | -0.6048 | |
| 100 | P | A | -0.4309 | |
| 101 | L | A | -0.0165 | |
| 102 | G | A | -0.4653 | |
| 103 | K | A | -0.7966 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4667 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1338 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1912 | |
| 110 | L | A | 0.0020 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1007 | |
| 113 | K | A | -0.3594 | |
| 114 | L | A | -0.6648 | |
| 115 | G | A | -0.8504 | |
| 116 | D | A | -1.3493 | |
| 117 | T | A | -1.1910 | |
| 118 | E | A | -2.4063 | |
| 119 | N | A | -2.6188 | |
| 120 | P | A | -1.9546 | |
| 121 | T | A | -1.7087 | |
| 122 | E | A | -2.3413 | |
| 123 | P | A | -1.3849 | |
| 124 | V | A | -0.8300 | |
| 125 | H | A | -2.1018 | |
| 126 | E | A | -2.4880 | |
| 127 | G | A | -1.9619 | |
| 128 | A | A | -1.3711 | |
| 129 | D | A | -1.9396 | |
| 130 | V | A | -1.3156 | |
| 131 | R | A | -0.9795 | |
| 132 | V | A | -0.1258 | |
| 133 | N | A | -0.8468 | |
| 134 | F | A | -0.3403 | |
| 135 | S | A | -0.3976 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7270 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2028 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5466 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2610 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0234 | |
| 157 | D | A | 0.1613 | |
| 158 | L | A | 0.6906 | |
| 159 | A | A | 0.0644 | |
| 160 | E | A | -1.4857 | |
| 161 | P | A | -0.2594 | |
| 162 | C | A | 0.1812 | |
| 163 | P | A | -0.1863 | |
| 164 | G | A | -0.1164 | |
| 165 | L | A | 0.5256 | |
| 166 | P | A | -0.1637 | |
| 167 | P | A | -0.3649 | |
| 168 | G | A | -0.4370 | |
| 169 | A | A | -0.0534 | |
| 170 | C | A | 0.6248 | |
| 171 | P | A | 0.5323 | |
| 172 | P | A | 0.6062 | |
| 173 | I | A | 1.7169 | |
| 174 | Q | A | 0.6983 | |
| 175 | L | A | 1.3395 | |
| 176 | V | A | 0.7971 | |
| 177 | N | A | -0.3375 | |
| 178 | S | A | -0.0110 | |
| 179 | V | A | 0.3353 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3868 | |
| 182 | D | A | 0.2756 | |
| 183 | G | A | -0.1732 | |
| 184 | D | A | -0.6233 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4726 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0992 | |
| 190 | F | A | 0.0559 | |
| 191 | G | A | -0.2576 | |
| 192 | N | A | -0.3536 | |
| 193 | M | A | -0.2482 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4946 | |
| 197 | E | A | -2.7166 | |
| 198 | L | A | -1.3219 | |
| 199 | Q | A | -2.5328 | |
| 200 | Q | A | -3.3437 | |
| 201 | D | A | -3.5752 | |
| 202 | R | A | -3.3514 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | -0.0410 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.5412 | |
| 211 | S | A | -2.0229 | |
| 212 | T | A | -1.6556 | |
| 213 | R | A | -2.4217 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2425 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3457 | |
| 220 | L | A | 0.5682 | |
| 221 | K | A | -1.1907 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8998 | |
| 224 | N | A | -1.6318 | |
| 225 | E | A | -1.2616 | |
| 226 | A | A | -0.6443 | |
| 227 | Y | A | -0.3843 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6310 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0994 | |
| 234 | F | A | 0.1896 | |
| 235 | G | A | -0.7623 | |
| 236 | R | A | -2.2984 | |
| 237 | R | A | -2.7434 | |
| 238 | E | A | -1.6607 | |
| 239 | Q | A | 0.0915 | |
| 240 | V | A | 1.4847 | |
| 241 | Y | A | 0.9031 | |
| 242 | A | A | -0.0364 | |
| 243 | R | A | -1.5569 | |
| 244 | H | A | -1.1171 | |
| 245 | F | A | -0.0809 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.1075 | |
| 248 | R | A | -0.5158 | |
| 249 | A | A | -0.8173 | |
| 250 | G | A | -0.7773 | |
| 251 | P | A | -0.7789 | |
| 252 | V | A | -0.6043 | |
| 253 | G | A | -0.9591 | |
| 254 | H | A | -1.0846 | |
| 255 | P | A | -0.4503 | |
| 256 | L | A | 0.5285 | |
| 257 | P | A | 0.0748 | |
| 258 | A | A | 0.3407 | |
| 259 | A | A | 0.5476 | |
| 260 | P | A | -0.2113 | |
| 261 | P | A | -0.0210 | |
| 262 | P | A | 0.0096 | |
| 263 | S | A | 0.5361 | |
| 264 | P | A | 0.7038 | |
| 265 | L | A | 1.8996 | |
| 266 | Y | A | 1.7413 | |
| 267 | V | A | 1.9297 | |
| 268 | P | A | 1.0104 | |
| 269 | P | A | 0.6455 | |
| 270 | P | A | -0.1991 | |
| 271 | P | A | -0.5112 | |
| 272 | G | A | -0.5190 | |
| 273 | S | A | 0.1867 | |
| 274 | P | A | 0.6533 | |
| 275 | Y | A | 1.7949 | |
| 276 | A | A | 1.3910 | |
| 277 | V | A | 2.4702 | |
| 278 | L | A | 1.9187 | |
| 279 | P | A | 0.6607 | |
| 280 | S | A | 0.1809 | |
| 281 | Y | A | 0.3709 | |
| 282 | D | A | -0.2276 | |
| 283 | Y | A | 1.1074 | |
| 284 | F | A | 0.7655 | |
| 285 | G | A | 0.2263 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.6277 | |
| 291 | L | A | 1.6231 | |
| 292 | V | A | 0.5452 | |
| 293 | S | A | -0.2091 | |
| 294 | S | A | -0.8409 | |
| 295 | D | A | -1.8770 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1274 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6886 | |
| 301 | R | A | -1.9412 | |
| 302 | P | A | -0.9923 | |
| 303 | F | A | -0.1043 | |
| 304 | W | A | -0.3359 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1690 | |
| 307 | R | A | -2.9098 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7506 | |
| 310 | G | A | -1.3787 | |
| 311 | N | A | -1.3905 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8369 | |
| 319 | N | A | -0.8786 | |
| 320 | E | A | -1.0349 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4150 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2339 | |
| 333 | N | A | 0.3627 | |
| 334 | F | A | 1.4087 | |
| 335 | T | A | 0.7365 | |
| 336 | I | A | 0.4245 | |
| 337 | S | A | -0.7886 | |
| 338 | Q | A | -1.3631 | |
| 339 | Q | A | -0.4274 | |
| 340 | L | A | 1.0957 | |
| 341 | C | A | 0.9719 | |
| 342 | T | A | 0.5817 | |
| 343 | P | A | 0.3666 | |
| 344 | L | A | 1.4489 | |
| 345 | P | A | 0.6596 | |
| 346 | N | A | 0.0286 | |
| 347 | V | A | 1.7650 | |
| 348 | Y | A | 1.6948 | |
| 349 | D | A | 0.3345 | |
| 350 | P | A | -0.2552 | |
| 351 | S | A | -0.2135 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.3600 | |
| 354 | K | A | -1.6645 | |
| 355 | N | A | -1.6518 | |
| 356 | Y | A | -0.1067 | |
| 357 | L | A | 0.7133 | |
| 358 | R | A | 0.9529 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1643 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.2457 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0629 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6833 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2742 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3291 | |
| 376 | L | A | -1.7312 | |
| 377 | D | A | -2.0221 | |
| 378 | P | A | -1.0834 | |
| 379 | G | A | -1.0924 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -0.6075 | |
| 382 | A | A | -0.7034 | |
| 383 | H | A | -0.8818 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4110 | |
| 386 | T | A | -0.5759 | |
| 387 | M | A | -0.3195 | |
| 388 | N | A | -0.8569 | |
| 389 | P | A | -1.2499 | |
| 390 | T | A | -1.5006 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5023 | |
| 393 | E | A | -2.8740 | |
| 394 | N | A | -2.4486 | |
| 395 | W | A | -1.5417 | |
| 396 | N | A | -1.3258 | |
| 397 | L | A | -0.2285 | |
| 398 | G | A | 0.5919 | |
| 399 | F | A | 2.3783 | |
| 400 | V | A | 1.7629 | |
| 401 | P | A | 0.0387 | |
| 402 | P | A | -1.9049 | |
| 403 | K | A | -3.3537 | |
| 404 | E | A | -3.8045 | |
| 405 | R | A | -4.0337 | |
| 406 | E | A | -3.7986 | |
| 407 | D | A | -2.8681 | |
| 408 | P | A | -1.7603 | |
| 409 | Y | A | -0.9939 | |
| 410 | K | A | -2.1146 | |
| 411 | G | A | -0.6278 | |
| 412 | L | A | 0.6744 | |
| 413 | I | A | 1.6584 | |
| 414 | F | A | 0.7252 | |
| 415 | W | A | -0.2610 | |
| 416 | E | A | -1.5695 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9351 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0793 | |
| 421 | E | A | -2.7041 | |
| 422 | R | A | -2.2691 | |
| 423 | F | A | -1.2409 | |
| 424 | S | A | -1.4963 | |
| 425 | Q | A | -1.8305 | |
| 426 | D | A | -3.0297 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -2.9293 | |
| 429 | Q | A | -2.6842 | |
| 430 | F | A | -1.5457 | |
| 431 | A | A | -0.9131 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6914 | |
| 435 | K | A | -0.8323 | |
| 436 | F | A | 0.1205 | |
| 437 | L | A | 0.9464 | |
| 438 | Y | A | 0.7985 | |
| 439 | Q | A | -0.3156 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine