| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLACAASGSTLDYYGIGWFRQAPGKEREGVSCITISGGGTRYSDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGKSRLRTWCPLYNQGLDSWGQGTLVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2559 | |
| 2 | V | H | -1.2921 | |
| 3 | Q | H | -1.3210 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7887 | |
| 6 | E | H | 0.2713 | |
| 7 | S | H | -0.2196 | |
| 8 | G | H | -0.7965 | |
| 9 | G | H | 0.1033 | |
| 11 | G | H | 0.7037 | |
| 12 | L | H | 1.4400 | |
| 13 | V | H | -0.0078 | |
| 14 | Q | H | -1.3599 | |
| 15 | P | H | -1.6118 | |
| 16 | G | H | -1.4277 | |
| 17 | G | H | -0.9601 | |
| 18 | S | H | -1.0690 | |
| 19 | L | H | -0.8632 | |
| 20 | R | H | -2.0103 | |
| 21 | L | H | 0.0000 | |
| 22 | A | H | -0.3827 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.3622 | |
| 25 | A | H | -0.5739 | |
| 26 | S | H | -0.7798 | |
| 27 | G | H | -1.3045 | |
| 28 | S | H | -1.1736 | |
| 29 | T | H | -0.8371 | |
| 30 | L | H | 0.0000 | |
| 35 | D | H | -1.3680 | |
| 36 | Y | H | -0.5024 | |
| 37 | Y | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | I | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.1439 | |
| 45 | A | H | 0.0000 | |
| 46 | P | H | -1.0581 | |
| 47 | G | H | -1.4806 | |
| 48 | K | H | -2.2448 | |
| 49 | E | H | -2.8213 | |
| 50 | R | H | -1.9954 | |
| 51 | E | H | -1.4619 | |
| 52 | G | H | -0.7689 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | C | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | 0.0000 | |
| 58 | I | H | -0.5129 | |
| 59 | S | H | -0.8402 | |
| 62 | G | H | -0.7442 | |
| 63 | G | H | -0.6671 | |
| 64 | G | H | -0.6293 | |
| 65 | T | H | -0.7476 | |
| 66 | R | H | -1.4559 | |
| 67 | Y | H | -1.3974 | |
| 68 | S | H | -1.6481 | |
| 69 | D | H | -2.5819 | |
| 70 | S | H | -1.7609 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6635 | |
| 74 | G | H | -1.6682 | |
| 75 | R | H | -1.5535 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9683 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4302 | |
| 80 | R | H | -1.0904 | |
| 81 | D | H | -1.7228 | |
| 82 | N | H | -2.3089 | |
| 83 | S | H | -1.7503 | |
| 84 | K | H | -2.5232 | |
| 85 | N | H | -2.1609 | |
| 86 | T | H | -1.0996 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.5221 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.3309 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.4367 | |
| 93 | S | H | -1.2998 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.4524 | |
| 96 | A | H | -1.7906 | |
| 97 | E | H | -2.2835 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3758 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7550 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.1514 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | K | H | -2.8511 | |
| 109 | S | H | 0.0000 | |
| 110 | R | H | -2.4435 | |
| 111 | L | H | -1.5060 | |
| 111A | R | H | -2.1307 | |
| 111B | T | H | -0.9326 | |
| 111C | W | H | -0.1839 | |
| 112D | C | H | 0.0000 | |
| 112C | P | H | 0.0000 | |
| 112B | L | H | 0.2055 | |
| 112A | Y | H | -0.2223 | |
| 112 | N | H | -1.8958 | |
| 113 | Q | H | -2.0437 | |
| 114 | G | H | -1.9348 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -2.7060 | |
| 117 | S | H | -1.5638 | |
| 118 | W | H | -0.4368 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.8285 | |
| 121 | G | H | -0.0110 | |
| 122 | T | H | 0.5281 | |
| 123 | L | H | 1.6093 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3908 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6581 | |
| 128 | S | H | -0.6538 |